| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location | No map location |
Predicted Genes from contig_2549408
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37953 |
5 |
1268 bp |
MLOC_37953.3 |
Available |
Available |
LOC_Os03g55290.1, FRAME:-3, EVALUE:6e-44, 13103.m06014 protein GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed |
CDS Structure of MLOC_37953
Contig Sequence (3789 bp)
>contig_2549408 3789 assembly3_WGSMorex_rbca.fasta
TCTGTTAGATCTTGGTGGCAAAAGACAGTGTGCAAGGCTGACCATTGAAGAAAGGCCATT
GTCTCCGTCATGATGCTGGTTATTGAAAAATATGGAAGAAGCGAAATGCTAGAATTTTAA
ACTTGACGAAATGAAGGCTCTGTTAGATCTTGGTGGCAAAAGGCGGTGTGCATGGCTGAC
CATTGAAGAAAGGCCATTTCCTCCATCATGATGTTGGTTTTTGAAAAATATGGAAGAAGC
AAAATGCTAGAATTCGAAACTTGGCGAAATGAAGGCTCTGTTAGATCTTGGTGGCAAAAG
ACGGTGTGCATGGCTAACCATTGAAGAAAGTCCATTGCCTCGTCATGGTGCTGGTTTTTG
AAAAATATGAAAGAAGCGAAATGCTAGAATTCGAAACTTGGCGAAATGAAGGCTCCGTTA
GATCTTGGTGACAAAAGACGGTGTGCATGGCTGACCATTGAAGAAAGGCCATTGCCTCGT
CATGATGCTGGTTTTTGAAAAATATGAAAGAAGCGAAATGTTAGAATTTTTCAGAACAAG
GCGGCCCTGGTCGCAGTCTTCATCTCGAGAATCAAAGAAGAAGCCCATCTTTGAGCCTTG
GCTGGAGCAAGCCACTTGATTACCTTGATGTCACGAGAGTAGGCTTTTTTTATCTCGTTG
CTTAGCGGCATATATGCATACCTTCTTCTTAATTAATAAAAATGACAAATATTTTGCGTT
GTTTCAAGAAAAAATTATTAGCAAGCCAGGATACAAGGTGCTTTGAGTGTACACACGGAT
GCCTCTTGCGAACAACCGTCCTGTACATGTGCAGTGTATCAGCGGCAAGTCTTGCGAGGT
CAAAAGTTTTTCACCTGGAGTGGAGCAGGTCAATTGGTTCCAAAGCCCTAAGCAGATTTC
ACCCTTCCAGGCCTACATTACTCGTGCTGCCATCTCCGTAAGTTTTCAACGTGAAAAAAT
CAGTAAAAAATTGTCTCCGGAACAGGCTTCTGTACCGGGACGAGGACAAGCAGCCGACAC
TGGATCCCACGCCTTTCCCATCCGAGCTTCACTCCGGTGCCGGCCACGGGAACTCGCACC
GCAACAGGCCGAGCAGAGCCATCAACTCCGCCATTGATTGATCGTAGCACAGTTTCAGTC
CAGTGACCCAGCGAGGGCGGCCGGTGGGCGAAATAAATAAACCCCCTGACGCGTCGCATT
CGGTTCGTACGTACTGCTTTCATCAGGAGAGGAGTAACTGAAAGGTATCGCAGCAACGCC
CCATCCCATAGCTCGCGCGCGCTGTCTCGCACCGACGCGCATCGCGTGCCCATCTCATGC
TCGCTCCCTGAAACTATGCCCGCACACAACATTCATGCTCTGCTCGCACATCTTCTTAGT
TGTATGTAACTTCACCCCAAGAAAACAGAAGCAGAACAAGGAAATTAGTGGACATAGACA
CATAGTAGTAGTTCATTATCACAGCACAAGGACATTTTTTACCGGCATGCCATAACAGTA
GCGCTAGGCCGGCATTATGCATGGTCAACAACACAGTCGGATCACGCATCGGACGCTACG
CATGCATGGCCGATCACGATTTACAGTTACAGGCACACGATATAATGATCTGCGACGTAG
TAGGACATGAGAGGGATGCATGAAGAAGTTCAGGTACATGCATGCTATGTAGGCGCCGCC
ATGGGCTGTGGAGGATGGCTGGTGGTGGGTCGATCATGGGCACTTGGGCCTCTTGCGCGC
GCCGTGGCCGGTGGTCTTGTCGCGGTAGCAGGGGCACTCGTCCTTGTTGCCGGCCGTCCC
CGACGGCACGCAGTTGCACTCGGCGCAGCATATCCCGCAGTACTTGAGGCAGTCGTCGTG
CCGGCTCGCCTTGGAGCACCTCACCCCGCACTTGCCGTCGCAGAGCGCTGGTCAAGAGCA
CGTACAGCACACCCACCACCACATTCAACATAGATATACAGCAGCGAGCACAAGGGACGA
CAAAAAATATTTTTAAGCTCCATTACTGACAGACAAGTGATCCGAAGGAGATGGAAGGGA
AATGGTTGTGAGTTGAACTGACCTGATCCAGCCATGGCGACGCGGAGGGTCGAGGCTGCT
AGGAGGACGAGGAGGAGAAGGAGAGCCAGAGTGGTGGTGGCGGTGGTGGTGGTTCGAAGC
TTCTTCATCGCGGTGTTCTTGAGAGTTGCTTGGCTCTGGCAGAGCCCTGCTGGTTGGTGT
GAGCTTGAGACCAAGGGAGCTGGAGGAGTGAGCTGGTAGCAGTGTCTTGGGGCCTGTGGG
GTTATTTATAGGGCCCAAAAGCTTGTAGTACCACGCAGAATTCAGTGAGCTTGTGGCCTA
TGTGGTGAACTCGTAACAGTGGCACGCAGGGACCATGGCGAACTGGTGATGTGTTGATCA
GTCGATGGGCTGTGAGCTAGCTGTAACCCAAAATGCAGACCTTTTACTCATGAACGGCCA
TCAACTCTCATCATGCTTAGATCGGGCAGTGAACTGTTTCAGTGAGATTTACTTTACTTA
ACTGCTAACAAACACGTAAAGGCAAGAGATCAACAACTCTATATACCCGTATATCATAGC
AGCTAGCTTAGCTAGACTACGTGCTTCGCCCACAGCAAACGTCGTCTTCCTCGGCACTCC
GGCTCGTCATCACGCGGCACGCATGCCCGGCAGGCTAGTACGCCGGATCACGCTAGCCGC
ACCGCTGTCTCCCGCGTTGGCACCTCGGCGCCGGCCAGTGCGCCCTGCCTGCCGCCACAG
GCCGGCCGGTAAACAACCACCAGTCCACCACGCGGATGGGCAGGCAGGTAGATGCACACA
GCGACGGACACCAGTGAAGGGGAGACGATGGCGCCGGCGCGTACAGGCAAAAGGAAGTTA
CCGAAAGGAGCATGCTATCCTTGCAAGGCAAGTAGGCACATGCCCGGTCCTCAGATTTTG
GGGTCCGAAACAAAACTAAAACCCGGGACCCTAAATTTTCACGTCAATTCAGATATTAGA
TATAATTAAAAAAGATTATGATGTTATATCTAACAAATTCAAACTAAGATGATATACAAA
CATAAGCATGAATTTGCACGTCAATTCTAATAAGTACTACTAAATATTATAATTTTATCA
TCTTTGACGAGTAATCTCCAAAATTCTGGTACTGCTTTCCCGCATGATTTTAAATGAGAT
AAATAGAATCACAAATCAGGCCACATATGAGAGTTAGAGTGAGAATGAGAGAGAGAGAGA
GAGGAAAACCTAATTGTACGCATGCATACACACACAAAGATGACTTTTAAGATTTGCAGA
TCTTTAGACCTTTACCCATGGATCAATAATCCTCGTGATGATATACAGAGTCGCATCTAC
CATCAAGCAAAATTACCAGGAAGCTATAAACTCAACAACTTATCAACATCTAGACTGTGA
AACAAGCTACGCAAAAGCTGTGATGGATCGATATTCTCACCGTCTCGCCTCCAAGCAGCA
GCCAACAGCTACGATGTATCGATCTCTTCATCGTGTGGCCTCCAAGCTGCGCATTAGTGT
CTGATGAATCAATCCCAGAGGAGCAACTTGCGTCGATGGTGGACGACCTGGACAAGACCG
TAACCTCTGGCTTGCGCCTCCCGATCTGAACGAAAAGGAATCATCCCAGAAACTCGCGAA
CAAGTCAATAAACTAATTGCAATATCGCTGCGTACATGTCTCCCTTGGGCATGGGCCTGG
GCTATCTGCGTACATGGGAGGGGCCTCTGGATTTCGGGGCCCGGGGCGGCCGCCCCCGCC
GCCCCCCCC
