Contig Data
morexGenes
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Map Locations of contig_2549403 (3808 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549403

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37948 2 1285 bp MLOC_37948.1 Available Available LOC_Os02g56980.1, FRAME:+1, EVALUE:6e-91, 13102.m06552 protein cytidylyltransferase domain containing protein, expressed
MLOC_37947 2 2600 bp AK359590 Available Available None





CDS Structure of MLOC_37948






CDS Structure of MLOC_37947






Contig Sequence (3808 bp)

>contig_2549403 3808 assembly3_WGSMorex_rbca.fasta
ACCTCTACGTCGGCCTCCCCTGCCCCTGGGCCCACCGCGCCCTCCTCGTCCGTGCCCTCC
TCGGCCTGGGGCCCCGCCTCCCCGTCTCCGTCGCCGTCCCGGGCGACGACGGCGCGTGGT
CCTTCACGCGGGAGAGCCCCGACGCGCTCTACGGCAAGCGCAGGCTCCGGGACGTGTACG
CCGCCCGGCGCGGCGGGTTCGAGGGCCGGGCGTCCGTGCCCATGCTCTGGGACGCCGACC
GCCGCGAGGTGGTCTGCAACGAGAGCATCGAGATCGCCAAGTTCCTCTGCACGCTCGCCG
ACGACACCACCAACGCCCTCGACCTCTGGCCGCCGGAGCACCGCCAGGAGATCGACCGCT
GGTACGGCGTCATCTACCCGAGCGTCAACAACGGCGTGTACCGGTGCGGGTTCGCGCAGA
GCCAGGCGGCCTACGACGCGGCGGCGGGGGAGCTCTTCGCCGCGCTAGACATGCTCGAGG
GCCACCTCTCCGGGTCACGGTACCTGTGCGCCGGCGCCGGCGCCGGCGTGACGCTGGCCG
ACGTGTGCCTCTTCACCACTCTGATACGGTTCGACCTGGTGTACAACCCGCTGTTCCGGT
GCAGCAGGAGGAAGCTGGTGGAGTACCCCAGCCTCCACGCCTACATGCGCGAGATCTACC
AGCTGCCCGGCGCCGCCGAGACCTGCGACATGGCCGCCATCGCCGACGGGTACTTCGGGA
CACTCTTCCCGCTCAACCCCGGCGGGATCCTGCCCATCGTGCCGGCGAGCTGCAGCCGGG
AAGCCCTCATGGAACCTCATGGCAGAGAAGCATTGCCTTCTGCTGCTGCTGCTGATGGTA
GGCAGCTAGGAGCAACTGCTAGTGTTGTTGGCTAGGATTACAGAGTGTTAACTGAATTGT
GTAGCACATCAAATTACTTACTGAATAATACCTTGGTACACATAGAGGATGAAATAAATG
GCAGAATATTACAGTGACAAAGAGTTTCATGTGTCGTATAAATGCTTTATTAGCGATATA
TTCTGTTGTCGAAAGACTGATACATTGACAACACCGTAAGGAAGATTCAAGAACCTTCTA
CTGGTAAGTATTGGTCTCCATACATTTGCAACCATTCATGATGCTAGTAAGCAGTCAGAC
TCCTTCAGTTCATATAATGGCAGCTCATCAGAGATGTTCCAGATTTGATCATAAGATTGA
TGCCCAAGGTGGCACAGTCCATGCCCGATGAACATTTCGAAAGGCTTGCAACTGCGAAGC
GATAAAATGAAAGTTTTAGAACCAAGGATTCTCACTGTGGGCAATACTAAGAGACTGCTG
GGTATAGTCGTATAGAGGTAAATATTACCATTGTCATGATCTGGTATCACTATCTTCAGT
CTCCATGTATAGTTTGTGCTCTCTAATGTACTCGATTATTTCATCACAAGTAAGATACTT
TATTGAGAGACATCCCCTTATACATTGTCTGCAATTTGATAAAACACAAAATAATAATAT
AGCAACCAACATCCTAGCATCAGATAAAGGAACATTTTGAAGGTGGTAATAGCATCTACT
CCCTCCGTCTAGAATTACTTGACGGAGAAATGCATGCATCTAGACATATTTAGTTCTAGA
TATATCCATTTTAATCTATTTCTGCGACAGGTAATTCCGGATGGAGGGAGTAGTTTTAAA
GAAACCAACGTAGGTAAAATGATACCTTACTCTGGATGAACTGATCTGATTTGGCACAAT
CTCATCAACCGAAATGATGTTATCCTGAAAATATACACAGGGATACACATGGATGAGCAT
ACATGTGAGTAAATCACCATAGTCTGCTGGAGTAGTAAGCTCCTCAAGCTAGAAGTTTCA
CCCCGCATTCTAGCAGTGTCGTGCTGCTGGATATTAGCTTTTGAACATCTTTTCCTTCCC
TACGTATACAGACAACACCAAAGTCTTTACATATGGCCCTGACCTGGAAACAAAAGTTTG
TGCATCAAAGTTACTTCTTCGATAGGGGCAATTCAAACAACAATTAAATAGGTTACCATG
ATTTATAAACAAGGGGTGCATAAATTCTGCATGTCGAATTGCGGATGCCAAAAAATGTTC
AAGTTTTATACCTGATCTGGAATCCAAACCCCTGGTGTGCCGAATGACTCGAGAAGGTCA
GAACCACATAAAAGCATTACCTTGACACCACCTGAGAGAAAATGCATGTTGTAAACGACT
GATTTATATACATGGCAAACACACTGAGACATTTGAATGGCCATCGAACAGTGTGAGAGA
AGGCATGACTGTATTGCAACAACAAAATCCTGCCATATACCTTGATCAGCTAAGCCGTCC
TTGCACAGAGAGTTCTTAACCCTCGAGAGAACGGTCAAGGTGCGCTGATAACCTTTCTGC
ATTGCCTGTGTCAAAAACACAGAAAATGTGCAAGCGGAAAACGACATTGTCCAAACTGTA
AACATCTTATGTTACAATGCCAAAACCCAATGCACACATCAACTAACATGAAAACCAAAG
AAAATCATGTTACCTCCCAAGGATCAACCATCACGAAAGACGAGCTTTGACATGCCAATT
CGCAGAGGCGGACCCGGTGAGCAGCCGGCAAGAGGTCCTGGCCAGCCCCAAATTGCGAAT
TCAGTCACGGAAACGGCGTTAACACAAACAAATACACATTTCCAATTCCAGGTAATACCT
TTTTCTTATACGCATCGTTCACCGGGGACATGTATCCACCCAGCACCGAGTATCCTCGCT
GCTGCAACTCATCCTTTGCAAGCTCTGTATGAATTAATCACATCAAAAGATGGGGTAAGA
GGTAGTCTTTTCACTTTGCTGATCCCATTCTCAGGCTGTTGTTGAGACTTGCTACTAAAC
ACAATAACACACTGAATCACTGATAGGTGCAGTAGATTAGCAAGTGTTGATTGAGGCTTA
CCGAACATGCGCAGGTGCATGTAGGTGGGAGGATTGAAGCTCCCGGTGGCCACCAGCACG
ACGCCAGCTCGCCTCCCCCAATCCCTGCCGTCACCGGCAAAATCAAGAAAAACCTGGAGG
ATCAGTCTAGCTATATGCATCAAGCAATCTAAGAAATCCGAGAGCAGATTCTTTTCTTTT
TGCTTACCGATTTGGATCCATGGAGAGCTTCTCCGTGGGGAAGGGCACCTCCACCTCCTC
CATGGCCATGGCCACGGCCGTCCTCTTCAAACCCTCACCTGAGCAAACAGCCGGCACGGA
ACCTTGGCTTCTCTCTTCCTCGGGTCGGTGCGCGCCGCCGGCGAGAGGTCGGCAGTTCGT
CCGGCGTGTGCGGCAGGAGCAGATTCCACTAGCAGTTTTTTCTTTTTTTTCTGAGAGAGA
ATTCCACTAGCAGCTGTGGGCATCGCGAACTGGGCCCGTTGGGCCGTTCGTAGTGCTCTC
CCGAGAGGCCCGCTAAAGGAACCAACAGGTCCACGGCCTATACATCAGGCCGGGCCCGTG
CGGCCTTGGGCAGCACCGCGCGAGCGGCTCTATAAAGCCTCCTGCTCGGGCGAGCTAGGT
TTTGGTGCTCTCCTCCTTCCTCTCATCTTTCCTCGGCGGCGGCGGCGCAGGCGGCGCGGC
GGCGACAGGCGAAGGCGAAATGGTGAGCCCGTCGCGGCTCCGGCGGGAACCTCCTCCCTC
CGCCGCGTTCCCTCTCGTCTAGATAGATCTGCAGTTCTGACTGATCCTTTGTTGTTGTCC
TTATTGTTGCGCAGACGAAGGGAACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACA
CGCTGTGCATCCGCTGCGGCCGCCGCAG