Contig Data
morexGenes
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Map Locations of contig_2549330 (6097 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2549330

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37902 1 1162 bp AK360549 Available Available None
MLOC_37903 1 202 bp None Not available Available None





CDS Structure of MLOC_37902






CDS Structure of MLOC_37903






Contig Sequence (6097 bp)

>contig_2549330 6097 assembly3_WGSMorex_rbca.fasta
GTCCGCGTGGCCCAGGCGCGTCGCGCGCGAGCGCCGGCACCGCGCCGTGCGCCGGTTCGC
CGACGTCTACGCCGCGGCCGGGGCCGACGACAGGGGCGCCATGGACGCCGCCGTGCGCCA
CCTCTACGCGCCGGATCTCAAGGCCGGCTGGGGCGTCCACGTCGTGCAGGAGGTCAAGCT
GCTCGCGCCCAAGGCCGACCGCGACTCCCTCGACGCCGCCGTCCAGGAGCTCGTCGGAAT
CGGCATCCAAAGGTACCGTCACCGCCCCGCCAATCCCGGATCTACTCCTCCCGCCCGCGC
TTGAATCTACTCCGTATTTGCCACCATGCGTGCCGGGATCTCAGAAAGGCCTCGCTTTCT
CCTTCAAAGAATCCGTCTTTCCTTGCAGTGCCAAGAATCACGCGGAAGAATTCGTCTCTC
TTTCTTCCGTTGATCCGATCCCCTTTGCTGTCCAAGAAAGAAGTCTAGTCATTTATGTCT
ATTTATTTACATCTAGACCTTGCGTTTCTTGGTTCTTTCTTATGTCAATTCGCTTAGAAA
CACCAATTGATGCAATTCCAATGCATCATGAAGCTGCAAGAACCGCTTCACATGGTGTGT
TAGTATTCTACCCCGCATAAATTGGTCAACGGAGGAATCTTGGTTTTACTGTTGCCACCA
AGTAGATTATAGATATCCAGCCTGTTGATTATTCTGTAGTGCATTATTTGGCACAGTATC
AAGTAGGCTATTGATCTCCAGCCTGTTAATTATGCTCTAGTACATTATTTGGTATGGTAC
CATTTATGCTACTTGCCTGACAATGGCACACTTGTGGTACATCTCAATTACAGAATATCA
TGTTGATTTACAGTGCTAAAATAGGCTTTCTGTACCTTTTTGCAGTTGTGACAACCCACA
GAGGTTGGTCAATCCAAATTATATGTGCTTATCATCTTTATCTTCTTCATTGCCTTGCAG
GGAACTGGCAGCTGAGACTATCTACAAGGAGAGATGCATTGCTGTAGACGATGGAGATAG
TTGGGCCAAGTACATGTCGATTTCTGGTTCTGTGGAGGATGAACATGACATAATCACCCT
GCAGTACACAGAGGAGGGCTTACTGACCATCGATGAGAACAGGGATGGGCGTGCGGCTGC
GTTTGGTGATGATATTGCCATCGAGTGCCTCGCCACCGAGTTCAAGAGAGAAGTTTTTGT
GGTAAAGTCAATAAACTAGCTGACATTATGTGTTTTTTCTCAGTTTTGTGATTTCTGTCC
ATAGAAGATAGAACTGTCCATTGTTTTATGTAGCATTTTACATTATGGTCTTATTGGATC
TCTTATTTGTGTGAAATTGACAGGTGCAAGCACATGGCACTGATGCGATGGTTGATGAGG
ATAACTGCGTGTTCTTCCTCCCGCACCTCCCTAGAGGAGAAATCTGTGATGTGCCCATCT
TTCTATTCATGAAGGGAACAGGTGCGTTGTAGATCGTCATTATATGTCGGAACGTGTTAG
CCTCAGTTGACGTGTTAATCGTCAAAGAGTATTTTTGTTTCTCGGTTTCCTGTCTAATAA
GTAGAAACCCAAATCTTTGCCTGCAGCATGGTGTGGTGCTGGTGCGGACCATTACGAGCC
ATTGATCGCCACCGTCCTCCAGCATGTTACTCCAGACAAGGCAGCTGTTGTACTTTGAGG
AAGGGTGGTTGTTGTTGTAGTCTTTAGTCGGCGATGCAGTCGAGCCAATTTTGTCACCGG
AGCTAGAGTGCCGAGTTGTGGAGCAACATCTATGCCCAAGAGGAGAGATGGTCTGTCTAA
CTGCGCATTTGTATGGCGTTTTTTGTTGTTGTATGTTCGTGGTATGGTAGGTTCTGACTG
CTGCTAGAGATTGAGCGAGTGATAGAAACACCGGTTCTAGCTTCTTGTTGTTGTGCGCCA
TTGTTGGCCGGCATTTTCCATTTGATTCTTTTTGTGAGGGATTCTCCTTTTGTTGGTTGC
CTGCTCGTAGGAGCAAGCATATGCTCGGACAGTCGGAATGGAACCGATTCATTGATATTT
TTTTGGCGTTGGGGTGAGGTATTTCTTCTAGACAGCTTTCCTATGTAGCCCCTGTTCTTG
TACTAGCTTTGTTCACAAACATGTGCACAACTGGTATTTGTAATAACGGATGATGCCAAT
AAGATTGTGAACCTTCATTCATCAAGAGTGTGACTGAATTTTCAGTCCGATTGGATTTGT
TCTGACTCTTTCGATGGATCGAAACTTGGGTATATCCTTGATTGATGTTGTGTATCCAAA
AAAACTGGGTTGCCTGTTTTTAGGAGCATGATTGGACAGTAGAAATCAAGAGTGTGACTG
AATTTTCAGTCCGATTGGATTTGTTCTGACTCTTTCGATGGATCGAAACTTGGGTATATC
CTTGATTGATGTTGTGTATCCAAAAAAACTGGGTTGCTACTTTTTAGGAGCATGATTGGA
CAGTAGAAATGGAACTGATTCGTTTTTATTTATTTATTGCGTTTGGGTGCAACATCTGTT
CGGAAATGCATTTGGGTCAAATCCCAGGAGGAGGGGTTGCTAAAGGTTACCAGCAGATTA
CTAAAGGTTGTGAACTTTTTTGTGGTTTGATGATTTCACATGGCGGTATATGCAACCACA
CAAGAGCATATCCCTGCTATCAGTTTGCACGTTGTAGAGTTTGACCACCATTTTTTATAG
CAGTGTCATGATTCGTGCGTTCCCTTGTATTTTTAAGAAGAAGCCATCGTGAGACGTGAC
TAGCTCGCTTGATTAAGTTAGCAATCATCCACAATTAATGATAAAATATATTCCACCCGC
AAAAAGATTGGTTAAAAATAACCCGGTTTCAAAGGAATGATCAAAAACCTCGTGTGGAAT
TGCAGAATGAGAGTCAGCCGGTGGCCAAGATAAATAGTAATAGTAAAGCTACGAGGTTGT
ATGACTGAATTTGCAGGGCCTTACTTGCTTCAAGCTGTGCTATGTGTAAATTTTGGCTGT
TTCAAGAGATATTTGGCTATTTCAGATTATCTAGTTTTTACTGTTGTTGTGTTGCATTGT
TGGCCTGGATTCAGTTAACCTCGGTTGGCAACGAAGAATGAAACAAACCAATGCATCATG
ATTTTGGATGATAGAGAGTACTAGCTAGGTCGGCTGCTAAGGACAGAGGTCATGGAATCT
TGATCCCTGGACATCGATTAATAGAGTTTGTCCAACAAACAAACAATGGCGATGGTGCAT
GATGATGTCTGTTTCATAATACTCCTATGTTTTGTGTTTTACTATGGCGTTGAAGGAGCC
ATTAGAGCAATTTCAACCGTCCGACCCAAACGGACGATCATTTTTGTCCGTTTTTTGTCC
ATTTAGATTGGTCCAGCGGACAGCAACATCCTTTCGGCATTTGGGTCGGCGCATTGCGCC
CAACGCTGGCCCGTTTCATTTTTATCAGCGTGTGAGAAAAAAACTAAAGCATTTCCAAAA
ATAATAACAAGCATTAATTAATCATTAAAAGCCGGACATGAAGGCCGACGAGGGTGCACG
CGCCCCATTACATTAATTAAATATAAAAAATACCTAAACTAGAAGGTAACCCTAGACGGT
GGCATCGTCGTCGTCGGGGCCGGTGAGGTCAAACAGCGTAGGCACAGGGTCGGCCCAGGG
GAACGTCGTGTTCCAGAGCGCAGATGTCTGCGCCTCCGTCGTCTGTTCTGCCGGCGCAAG
TTGTGCTGGTGGCGGTGGCAACGCAGCACGGGCACGCTCCTCCTCCTCCATCTCTCGTCG
TTCCTGCTCCGCCTCCTTCTCGAGCTTCATGTACCGACGGCCTTCAACGCGCTTTGCCGA
CAGGTGCTGTGACTTACAGTGCAGGAGGTAGGCTTCCTCCTCCTTCGGTGTCGCGCCTAA
CCAGATGGACGACGCACTAACCCACTCCCGGAGGCAGCCGATCCACTGGTAGACCTCCTG
CTGCGGCTCCGTGGGCTCGGTCTTCGGCGAAGGTGGCATGACGTAGTCGGCGGCGGCGGA
CAGCGCGATGGTCTCCGCGAGCCGCTCCTGGTACGCCAGCTCCTCCTCGTTGGCCTTGTG
CCGCTCTTCCTCCTCGCTCTCATGGAGAACAGCTGCCAGCGCCGCCTGGTAGGCGGCCTC
AGCCACCTGGTCCTCCTCGCTCTCGCGGAGAACAACTGCCAGCGCCGCCTAGTAGGCGTC
CTCAGCCTCCTGGTCCTCCTCGCTGACGGCGGGCAGGGGCGGCGGAGGGCCTTATGGCTG
CACACCGTGCACGCCACGCTGGCGCTTCTCCTCGTGCTCGACTGCGAACCAGAGCTCCCA
GTGGGGAGAGTCGGCCACGTAGGCAGCGTTGAGCCGCTGCTCCAGCGTCAGCAGACGCCA
ACGGCGACTCACCTCCTGCGCGTGCAACCGCAACACGGCCGGCATTGGGATCCTCTCCGG
ATCAAGATGCGAGTGGTGCGGGAGGGTGACATCGGGGTGCGAGACGCGGTGCTCCCAGTG
TTGTCGCGCTTGGTGCACCGGGACGCTGACATGCTGGCAAGGCTGGCGGGAAGACGCTGA
CGGGGAGATCGCGCGGAGGTAGACGGGGGGCCTTGCCCTTGTTTTGGAAGGAGCCAGTCA
TGGCACGCGGTGCTAAAGTTTGGTTGCCGACGAGGTGGCGAGATGGGGACGGGTGAGTTC
TGGAAGCAGATGACGCCGAACCCACTGCACGCTCGGATAAAAAAAGGTCGACCGAGGCCG
TTGACGCGTGGGCCCGCGGAGGGCGGCCGTCATAAATTATGTTGACCACGGTTGGTTGGG
GCGGACACCAAGAGGGTGCGCACGCGTCCGAGCCGACGCATTTCAGTCTCAAATTTGGGC
CAGAAATGGATCGGCGCGGACGCGTTTTGACAATGGATCGACGTGTTGGGTCATCAGTTT
TGTCCGCGCGGCCCCAAACGAACGGCGACGGATGAAATGGGTCGCCGTTGGAGTTGCTCT
TAGCTGAAGAACTTTCAGTGCAATTTTGTTTATGATTTCGACTATGCAACACGTGGTTGC
AGTCTCTGCATATGACATTGGAATGCAACTTGTCCAGTTTAGTGAAAACCACACACCCAA
TGACGTGGAGCATTTTTATTTGACTGAAAGACCAGACAAATCCATACCAAATATTGTGGC
TTGGAATTAAAAGCAAATGGATATCTAAATAGATAATTACGGTCTGACATTCCATGTGTT
ATGGCCCTTGGGATTGCTTGGCCACAAACATGTGCACAGCTAGTAGTACTTCTTGTTGGG
ATTTCTAACACTTGTAACAATGGACGGTGATAATAAAATTAGGAATCTTCATCGTCCTTG
AGTTTTACCGAGTTTTCACGAATAACTAGATTTGTGAATTTTGATGTAACGGCAGCATAT
ATCGCAAAAAAAACAAAACATCGGCATGCTGTGTTATCAGTTTGCCCGTTTTAGACTTGA
CTCTTTAGCAAATCGTGACTCACACTACGTTCCTTGGTGAGAATGGTCCTTGGCCTCTCG
TAGAGCAATTACATCCACGCATTGATCATTCGCCTAATCGAAGATAAACACATTGTTTGC
ACATTCGTTCGTGGCATGGGGCCTTTCTTGCAAGCAGCCAAAGCAAACAATGAGATTGTT
AAGATCCTTGAAGCAAGTAATTCATCAGAAATGGAAACTTTTGAGAAGGAACCAAACGGG
GTGCACCCCCTTGAACGTGTTGCTCCACACATTTATCATGGGAAAACGCTTTCACCCAGC
GCGCCGGCCGTTCATTTAAAAAGTTGTAACATTTTTTAAGAAGGAACCAAACGGGATGCA
CCTCCTTCGACATATGACATTTTTTTATCCCGATTTGCTGCAACCATGTTTAATTTTGCT
TCAAACGTTTTTTATTTTTCTATATTTTGTCCATTTAAAAAGCTGCATCCACGGTTGGTT
GCAACTTGAGTTCGTTGGATTTTTTGCTACAACCGGCGCTTAATTTTTGTACAACCAGTA
TCATTTTTTGCTGCAACCGTTCACTATAAAAGTTGCATACACGTTCGTCAGAGTTGCAAC
CCAAGTTCACCGGATTGTTTTGCTACAACCCTTATTT