| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2549313
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37893 |
2 |
1915 bp |
MLOC_37893.1 |
Available |
Available |
LOC_Os07g45090.1, FRAME:+1, EVALUE:0.0, 13107.m04751 protein NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_37893
Contig Sequence (9687 bp)
>contig_2549313 9687 assembly3_WGSMorex_rbca.fasta
CTCCCACGGATTGATAAACCTTACGTAATCCACTTGAGGGAAACTTGCTATTGCCCTACA
AAACTTTGCGCTTGGAGNNNNNACACGAGTCTACAAGAAGAAGGTCGTTTAGTAGACATC
AAGGCCTACTAAGATCACATATCCAAACCCATTAANNNTTTGTTAACTGCGGTGACGATC
AATGATCCTGTCGATCCTATCGCCATATGTCGAGGACTTGCGGGAAGGGCCACTCCCATC
CCTCTCCTGGACGGTCTGCCTACCCGGCCGCGCCTCATAATTATTTCACAGGTACCCCTT
GGGGCCTACCCGACTCACAAGAGACTATTGGGAACTCAGGTCCACCTCAATCGGGGTGGC
ACCGTGTGTCCCTTCAGTCCCATCACATTAGTAAAGGGGGCAACAGTTAAAGTAAATGTG
TGCCCTTGTCATCAAGAGGGAATTCGAGGAATCACCCTTGATGGATTTCACTCGATGTAA
GTGTCAGGTAAACTGGGAGGAATCACCCCCGAGGGTTCACCTTGAGGTGTTGCATGACAC
AGTCGTTATCGGGAGTGGCGAAGGAGGAATCACCCTTCGTACAACTAAGGGGTGTGATGT
GATGTGTCGGGCTCAGGACGTCGATCAAGGGGATCGAGTCATCAATGATGAAGCGGGGGC
AACATAGTCAAGTGAGGGGATCACTGATGGTTCACTAACCAACCTATACTAAGCATTTAG
TATAACAGTAAGGTACAACAACAGTTTAACAAAAATAGGCTATGCATCAGAATAGGAGCT
ATCTACAAGAGTAGCAAAATATAATCCAAGCATGAGGGAGAAGGAAATGGATGATATCAT
AATGATCAAGGGAGGTTTGCTTGCCTAAATACTCTACGGCAAGTGGTTGAACGTCAGTGG
CGTGGTCGTACACAGCAACAGTGTTGGTCTCGATGTCTATCGAAGAGAAGAGGGGGGAAA
CAATGAATATAAAGCAAACAAATGCATCACGATGCATGACATGACAACATGCAGTGTTAG
GGTGATCTAACGCAGTACTACACGTTGTAGACGGATCGGGAAAACATGTGACAATATTTC
CCGGGTCTCGGGCTTTTGCTGGACAAATGAATCGGAGGGGAAGTCCCATGTTCATCATGC
TAGGGGCGTGTGACACATGAACGGACAACGTATCGGATTCGTTGGATTCTTCTCAGCAAC
GTGCATATATAAATTATTTTCATCTCACTTGTAGATTTTTTATATTAATTTTGAAGTTTT
ATTAATATTCTAAAATTCAAAATTAATATTAATTCAAAATTAAAAGAAAAACCACTAGGT
GCACCCAGTCGAGTGCACCCAACAGTATAACAAGGACTCAAAGGGAGGGGCGAGTTGACT
GGGTCAACTGGCGAGTCAACACAAGCTGACTGGTGGGGGCCCCTGTTGAGTCAGCACACT
TAGTGGGACGGCCCTATCCAGTGAATAAGTGGTAGGGCCCGGCCTGGTGTGACAGTGGGC
TAATTCGGGGTTAATTTAATTAACACGGTTAATTAGAGGGTAGGGTCTCCTTGTTGGTGG
CATGTGGGCTAACTAATTTTTTAAACTAACCAAATCCAAAATTAGCACGGGATGGCTCCA
CGTGTCAATGACACGAGGGGGGTCGTTAGCGCAGGTTTTGACCCGGGTTTGACCGGCGGC
TCGCTGCCGGCGAGGCCAAACGCGGCGGAGGGCGGCAGAAACCGCCCTCAAGCGACCAAA
TGAGCGGAGGGGCTCTACGCATAGCTGGCGACGCGACGCATCCAATGAGGGGGAGGAGCA
GGTTGCGGGGGCACCATAGCTCGACGGAACAGGGCACGTGGCGGTGGCCGGAGCTTCGGC
TCGATAGAATCGAAGACAAAGGCTCGCATTGAACGATCTAATGGACCAAGCAACACCTAC
GCTCGACTACGAGCACGCTGGCATGCTCAGCTAAGCCCGAGGGGTGCTACAGCGACGGCA
CGGAGCTCATCCACGACAGCGGAGCTTTGGCAATGAAAACGGCGAAACGGGGCATGGGCG
CGAGTGAAAAGAGAGGGCAAACGGACGGGAGGCTCACATGGTCATATAGGGGGAGGCAAC
GGGCTCGGGTAGTCCGGGGTTGCCGGAGGGGAGCGAATCGACGGTGAGCAGCTTCAGCGA
CCGGCGGCGCTAGCGAGGTCAATTCCGACGTTGTGGCGATCACCAGCTCGAGCTGCTCCT
CGAGATCGACGAAGGAGACATGACTGGAGATCCCGGGCAAGCTTGCAGGGCCTGGCGACG
AATGTGGCCGCGCGTTTCAGCGGAGCCCGACCATGGTGGCGCTCGGTTGCGGTGGGAGAG
AGCGAGGGGAGTGGGTGAGGGGGAAATGGGGCGTGCCTAGGTTTAGCATTGGCGCTAGGG
AAGTCGTCGACGTCTTGAGGTCATCCGGGAGCCGCGAGATGGCCCGCACGTGGCCATCCA
CGACCACGAACGCGCCTCCGTCGACCACCGCACAGGAGGGGGAACAGGGGTAGGGGGAAC
GCGGTTGTTGGGCTGGGCCGGTCACTGGGCTGGTAGCATTTCTTTCTTTCTCATTTATGT
TTTAATTTAAATGTTTATGTTTTGATTTAATTTTAGCACTAAAGGACTTCATAAAATAAG
AAACATGTCCATTATTACAAATGCAATATTAGGCAGTGCCGTAAAAAGTTTAGAACCCAT
TTGAAAAGTTTGGGAAAAAATGTAATTAAAAAGGCACTTAATTAATTGTTTTGGCATGTG
TTATAATTGTTTCGAGACACTAAAAATACTTTATAAAATGTTGGTTCTAATTTTACAAAT
ACCACCTGAATATTTGTAACCCAAACATGATTTTTGTTTTCTGCTTTGCCAAAATATTTA
AACCACATATGAACTGAATTTTAAATTTCAAAAGGACTTTGAAATGGGATATAATTCAAA
TAAGATCATGCACTGTTTAACAAAATGGATTAGCTTAAACTTGTGATCATTGTAGCTTGA
TTACATAAGTTATTGTAGCTGATAATCCAAGGGTGTTACATTCAAGAAGCCGAATAGAAA
TGGCCCACTAAGCCATTATTAAGATCAACTTAAGCAAACATTAGCCATCGATGCCAACAT
AATTTCAGAGTTCGCTCAGATTATGAGGATTTAGAAGCAAGTCATTATTTATAACATTAA
AGAAGAAAAACAGCTTCATGTAACATGCAAGGTACAATCCTTCATATTCGTTTCCACTTC
GCCATCAAAGTACACTGGCTTCATCAGTGCATCAAATAAACATCGACATAAAAGGTTCAA
CCAATAAGGTAAGCTACATCTGCATGTGCAGAAATGAGCTTCACCAGTTTGCATTATTTC
TGTGAATAAAATCAGCAAACAAGAAGTGGTGCTTATGCAGAAGCTGCCATCAGCAGCTCC
CTATCAGCACGATCGCGGATCCTCCTCTCCAACTCAGGTCTGAAGTGCCTGATAAGACCC
TGCACAGGCCATGCTGCAGCATCCCCGAGGGCACAGATCGTGTGGCCTTCAATCTGCTTC
GTGACCTCCTGAAGCATATCAATCTCTTCCAGCTTCGCATTACCCACTTTGAGCCTCTCC
ATGATCATCCAGAGCCATCCTGTACCCTCACGGCAAGGCGTGCACTGCCCACAGCTCTCA
TGCTTGTAGAAGTATGACAGTCTAGCAATCGCATCAACTACATCTGTGGATTTGTCCATC
ACCATAACTGCTGCAGTGCCTAATCCGGACTGTACAGCCTTTAGTGCATCATAGTCCATC
AACACGTCATCACATATGTGCTTTGGCAAAAGAGGAACAGACGAACCGCCAGGGATAACT
GCAAGCAGGTTGTCCCATCCTCCTCTCACACCTCCGCAGTGCTTCTCGATTAATTCCTTC
AGAGGTATACTCATTTCCTCCTCAACAGTACAAGGTTTGTTCACATGACCTGAGATACAG
TACAGTTTTGTTCCCGAGTTATTCTTGCGTCCAAAACTCGCAAACCATTCTGGGCCACGC
CTAAGAATTGTTGGAGACACAGCAACAGTTTCAACATTTGTGACAGTTGTGGGGCAGCCA
TACAGCCCAGCATTGGCAGGGAAAGGTGGTTTCAGCCTTGGTTTACCCTGCTTGCCTTCA
AGGCTCTCCAGTAGGGCAGTCTCTTCACCACAAATGTACGCACCAGCACCAAAATGTATA
TGCACATCGAAATCATAGCCTGACCCGCAAGCGTTCTTACCAAGAAGTCCTGATGCATAT
GCTTCCTGCCGAGCTTTCTCAAGGTTCAGACGCTCATTCACATATTCACCTCTGATGTAG
ATGTAAGCAGCTGATGCCCTCATTCCAACTCCAGCAATAAGGCACCCTTCCAGAAGCTTG
TGGGGGTCATGACGCATGATTTCCCTGTCTTTACAAGTTCCTGGTTCACTCTCATCAGCA
TTAACAACAAGATAAGAAGGACGTCCATCAGAGACTTTGGGCATGAAGGACCATTTGAGG
CCAGAAGGAAAACCTGCACCTCCGCGCCCTCGCAGACCTGATTTTTTCATTTCATTCACT
ATCCAGTCTGCCCCTTTAATCACTAAATCCTTGGTTCTATTCCAGTCACCTCTCTTCATC
GCACCTTTCAGAAAAGGATCATGAAGACCATAGAGGTTGGTGAAAATGCGATCTTCATCT
TTAAGGTCACCAAAGTGAGTCTTCTCTGGAGGTGGGGGTGGTGGTGGAGGCTGTGGTGTG
CTTGATGTAGTAGCAGCCTGGGTGCTGAATGATCTGCCAGCAGGATACAGGTCGGCACAC
GAGGGAGAACGAGTAGGCTGTGCCCTTGATAGAGAATGCAAGTACTCAAATGCAGCCTGG
AAAGAAGGAAAAAACAAAACAAAATGAGGGATATGCCAATAAAGTATCTTGGCTTGACTA
TAACTATCTGAGCCAATTTTAGAGTAAAGGAAGACCTATAAGGCAATGATAATTTAAAAG
GGAAGGAAGATAACAAGGCAATGATGCCAGCAAGCAAGCTAGCTGAATGTGGATGAAGTT
GCACACTAGCCTTGGACAAAGTACAGAAGCAACAGCACAGCGCAGTGTGACTGTACACCC
TCCGTCAGGGTTTAGTGGGCCAGCCAGCCAAATAGGCAGGACCAAGGAACCCCGGTTTAC
CGCTGGTTATTAGCGGACGCTCCAGAAACCATACAATCTAATGCCTTAACTGATTCGCAG
TAATAGCTACCGCATACCTCCCACCTTATTTGCCGCGCGCACCCCCGTCTTGGCCAATAC
ATGGCCAATAGAAACCAACCAACTGATCGTTTGTCCGTTTTAATTGAGAACGGAGACCAC
CATCCCATATTTGTGCTAACAGAAGGGAGTTAATTGCAGCGATAAATGAACCGAATGAGG
GGAGCTCGAGGAAAAATTGAAGCGTTTGCACATCTTGAGTGAGGCAGCTGCCTTTTAAAT
CCAGACATGCCTACGCTGCTCGCTGGCCTGATAAACCCGGACGGAGGGAGTATAACAGAA
GCACCATATATGATGTCATCATAACTCATATAAATCGCAGTTGCCCTTAACCAATTATCT
GGACACATAATTACGACTAAAAATGAGAATTGTGTGCCGAAAATCACAACAAATCCAAAT
GGCCAATAAAATAACGTAAAATCCAATAGGAAAGACTAAATTCATGACCAGCATTATTCC
ACTTTGTCCTATTCAAACAAATCAGCTAAACAATCACAACATGTTAGCAGGACAACTCCA
CAACCACTAAAGAGCAGTAGCCTAATTTTCCCATTACCCCAGACTTGCAATGAACAAGGT
CATGACAGCAGCTATCCATAACTCTCCACCACCCAAACCCAATCCCAGATCAAGGAAACA
GCTAAAATCCTAGACACACATATATATCTGGAGTTCGAATGGGGGAAGAGGTGCTCAGGA
TTGTCTACCCCCTTGGTGGCAATCTACAGAAATGCAGAATCCTTGGCCGCCTGCACTGGT
ACTTCACCTGTGGCAAGCATCCAGCTGCTGCGGACCCAAACCAGTAGTGGCGGCGGCACA
GAAGGCCAAGCAGTGGGCAATGTGGCATAGGATTTTTTTTCCTCCTTCTTGGTCTCCTAT
TTGTTTTATGGTTGGATGGACACGGCTTGTGGGTGCGCAAGTGTGTTGCTTCGATCTGGG
GACTTTGGAGCAGAGAACGTGAGATGTGTTGGACAAGACGGACACCCTACAGACTTGGTT
CAATGGTCATATCATTCTGTTTCACTTTCTAATTTTGTGATTCAATATGATACTTATTGC
TTAATCTGTTCAATCTTGATGTCCTATATAACTAAATAGTTGAAACACAATAACCTATTT
ATCTCAACACACAAGCATGCATGGGAAAAGAGCCACCTCAACATGCAAACATGCATAGTA
ATAGGCCCACCTCAATAATCAATACAGTGAATCATACATATCTTCAATTTTACTCTACAT
ATGCTTAATCCAAATATTCATTTTTCATACAACCAAATCCATCAAAATATATATCAACAA
TATCACGCAGCAACGTGCAGGGTATCATCTAGTTCACCAAATTTTGGTGTGCAAGCTATT
TACAGGATTTAACTCAGATTGCATATCTAATAAAAACACTAGGAAATAGAAAGAAAATGC
GCATGTTACAAAACCTCAACCATTTACCAAGACTGGAATCAACCCTCAAGTACATAATCA
AATACTTCACAACCTGAATTGTTGAAACTAGATAGTTTGCCCAAATCAAGCACATCGGAG
AATCTACTATATAGCAGCTTAGCAAAGATCAAAAAGGGCATAGTGCTAATTCAGACACCT
AAGATAGCACTGTAAACCCAAATGCTTGGTTAAGAACAACTATAGGATATCATTCTTATC
ACAGGAAAGAAAACCATCAATAACATAGGCTATATGACTTCCAGGTTACCTAGCAAAGGA
TTACAAACAAACTAATGCCGAGAAACAGATGATGTAACTGTAAATCTGTAACAGTGGGTC
ACATGCTACAAACCCAAGTAGGCACGCAAAGGAAATAAAAGTAACACTTCAAACATCTGT
AACCTTTTCAATTAACACTAAAAGCCTAACTAAACCCAAAATTATCTTCACTGAACTCAT
TTTATCCCTGCACATGAGACCTTGATAAACACATGCCCATGTTTACCTATAAGTTGAAAC
GGGAAAAGTACCACAATGGTGGAATTCTGATCTCATATCAGGTAGGAAAACAATTTCTAT
CTAAAGAGCAAAGACTTTTTTTCTCATTTAAGCAAAAGGTTAGCAGATATTTTCTCTTAC
ATGTCCCAGTGCAATAACTGACCACATGCCCCACTCAATCAGGAAACAATGAAAACTACA
GGAGGCGTGTCTCATTTCACCACAAAGAACATTATTAGAACTATAAGACAAACACAACAC
CCATAGCGCGGTTTGATGCACATGCATCAGAACCCATGCAGCTAGTATAGAATCGAGTGT
TGTGGTAGAAAAATAGAAAAACCAATCTGGGCTACATCAAACTACACCTGTCAAGCTCAT
GAACTAACTATAATCTCCCTCCACGATTGGAAATGTAAGTATAAGCAGTGTTTGTCCTGC
CAAACGTCAGCCGTACTTATATACTAACAACATGTATTTCTACAGCTGCAACAAGGGACT
GGGGGAGTCGTACGAGCTGCCTATGGCCACCCAACGATCTACTTCAATCTCGACTTCACA
ATTAGAAATCAAATCCCCCAAAGGGATTCGAAGCTGCTAACACCCTTCTCCGGTTTCGAC
GCCCCAAATCCGCCACTCTATCCATTTCCATTTACAGACAACAGGCAGATCCAAGCGCGA
GCCCCGGGTGGGTATGGGGGAGGGGGGAGAAGGTGGAGTTTGTACCTTGCGACCGGGAGA
GATCTCGGCCGATCTGAACAGCGCCCACCGCAACGCCATCTCCGCCTCCGGTTGGCCTCG
AGTCCGTCGGATTTGGAAGAAAAAAAACAGGGAGAGACTGTTGTGTTGTGGGGAGGAGAA
GCGGGGCGAGCTCCAGGCCAGGTGCAGGAGGGGAAGCAGCGGTCTCTTGAGGGGGCGGTT
GCCAGCTCCTGGCAGGAGATGGGGCCCAGCCCACGACTCGCTTTCATTTTCTATTCCCCA
GGCCAGGCCCATTCTCCATGGCGCTTTCTCCGGACAACTTGTTGATTTTTTTTCTTAATT
AATTAACCCCTTAACTAAAACGAAGTCTCGAGCGAGTTAATGTGTGTCTTCATAGAGGTG
GGTGCACGTATATTGATTGAATTGTGTTCAAGAAAAGAGAGCTATCATTATCATCTTGAA
TCACGCGTTGACCATTTTGCAGAGGGGGCTCTCGTGGTAACCACGACGTTTCGTTGATGC
TAGGGTGTACTTTAGCGGGTGAGGTGGCAATTATGCCATCTTGAAGCGTTTCTTACTCAA
ATGTAGTCACATGTCTGGTGTTAACTAGAGAAGAAGGGGAAGTTGTTGATACAGATGAGT
TGATTCAAATTTCAAGCATGGAGTTTATGTGTGGTGATTATGCCCTCGATGAGAGTACAT
CGAGAGTTACTTTAATTAATTTGAAAGCACATAATGTCCGCACATATCCCTCGCCCTAAC
CTTGTCGGTCTCAACAATCCTTAGTGTGACCACCGTGGTGTCTTCAATTTTGTCAATTGT
GCGCCCGACCATACCTCTGTGCGTCTCGAGTTGCGTCCTCTCCATCGACAATTTCCATGA
ACCAGAGACTATGGCCTCCTCCTCCCACGCTGCCTTTGATGAGCTTGCTCTAGGTTAGGC
ATGAGACGACATCTAAGTGCCACTTGATGAGTTGCTCGAACGATGATGACCAACGTGGAG
TGGGTAGCCATGTTCGTATGGGAGAAGGATTTATGGGAGATGATGCATCTACCGAAGAAG
AAGCAACCTCGAATAGATATCAAACTCAAAGTAAAGAAGAGCAAGCTCAAATAGAAGAGG
ATGTAACTTGCGGACTCTCCGAAGGAAACTATGATGTGACCATGAAGATGTTGGGTTCTA
CCGTAGGTGCATCGCACGCTAATTAAAATTTTCTTACACGCAGAACATGTTACGGAGATG
GATCACAAATCGTTACCACTAGACATGCAGTGTCGTGCAGCGAAAGTAGAGTTGGTGCAG
CGCGTCCGCGAGGTCCGTCCCCTCCTTGTCCGATCTCCCTCGAACAGCTAGTCACCGGAT
CCCACGTATAGGTTTGCCGGAGCGGCACAAGTGCACCGCCTCTAATAGTGTTCGCACGTG
TAGCAGGAACACCGTGTGGCGTACTGGTAGGTCTGATCACACAGTCGGCGGCAAGTGGAG
GTGGCTAGTTGCAACATGCAAAGCCCTAATGATGGTGCCCACGTGATCAACTGAATAATT
GTGATGCACCTCCACTATATACAAGCATTTGTTGTGGGCTTAACTCTTGGACCTCGCACG
GATCCTAAAGCCCACGTGTTCCTTCCCTTGATCATGTGACCCCTTAGGTTCTCGTTCACT
TGGTCGTAGGTCAGATTATATCCGGCCTGAATAGTCAGTAGCAGCCTCTAGCAAAACGTG
TCGACTCCAAGTGTCCGATNNNNNNNNTTAGGCGAACCTGTACTTCATACTCCCTCCGTC
CCACAATAAGTGACTCAAAAGTGACTC
