Contig Data
morexGenes
Links



Map Locations of contig_2549291 (5843 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2549291

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37883 1 3216 bp AK249972.1 Available Available None





CDS Structure of MLOC_37883






Contig Sequence (5843 bp)

>contig_2549291 5843 assembly3_WGSMorex_rbca.fasta
AAAGGCTTTGTTGTTGTTGTTGTAACCTATTCCAGAAAAACATACCTATTCAAAGTGTTC
ACTGGAGGATAAGCAAATGATCTCCCATACAAGGAAGCAGCTGAAGCAGCAGCCTCAAGT
TTTGCTTGACGCATGTTCACGTTCTCAGTTGGTGCTCCTCCTGAATTTGGAGTACCAGCG
CCTGCACCTATTTTCCTTACATAGAATTAGGATTGACATATAAAACAGGTTGCAAGAATT
CAGACCAATGAGGAGAAACTCACCAGGCTGAACTCCAGGTTGAGCTCCATGCTGTCGTGC
TGATGCTGCACGTCCATTATCTGGGGGGATAATTGGAGCTCTACATGTTGGGCAAGTATG
TTGGCGCTCTAGCCATGACCTCAAACAATGTACATGGAACAAGTGCCCACAAAGCAGCTT
CTTTGCTGTGGTCATCTCTTCACGGCAAATAATACATGTGACATCACTCCTGAATATATA
AAGAATCAAAATCATAAACAAGTTCAATTGCTGAATCAGCCAAACAACCAAAACAGTACG
AATAAAATTAAATGTACTCACGTATCAAGCTCATCTGGTGTAGCGTCTGGAAAGCGTTCA
TTCATGTTGGAAGTTATCTTTCTGTAGCGTACATAATCTGAAATGCGAATTCTGAAGTTG
CGGAAGGTCTCATACAGCTCACGAATCAAGTGCAGTGGGACACCATAGTTCCTGATATCA
AAGTAACAGGTCAGTCTTAAGAAGTTCGAACTACAATACCCTAAGGGGAAAGAAGATTTT
AAAAGAACTTACAGGAAGATCGCTATGAAGAAGAGCATATATAAAGACAAGTGCACAAGG
TCACTGATAAGCTCCAAATAAAATGTATACACTGCCTTTTTCTCCCATTGACCTTCCATT
AGCATGTCGCTGACATAGAATACATACTTCACGAATGTCGATACCGTCGATGTTGCTAGT
ATCATATACCTAAAACATGATTTGCACATGCATGAGCTACTATGAATCTCAATATCTAGA
AATAACATCAATAATCATCTGCAGATATTCAGAATAATAGAATCATAGCCTGAAGTAAAT
AATGCAAGATCAATCATCAGCTCAATATGGTAGTTTTCTTGGGGTATCTAAATATGGTAG
TTACCTTGCCTGAAAGGCATGTCCCCTGCTTTAAAAGCAATAATCAACAAAGAAATTTCA
TAACTGGTGAGAGTTGCCATAGTCTAGAAAACTCTGACCAAATGATTTGCCCCGCTTTCA
CTTAAATGTTTGTTTAAAACTTAAAAGTATAATTCAGCGAGTTCCTGGACTCGGATTTTG
ACAAATGACAGCAATAACATATAAATGGAAGGGATAGGCTTGATGAGGTAAACATACGAG
AAAAACTATACATGGCCTAGTGGATGCACCAAATGAAATGATTAACTGTTGAGTGCCATA
GTATTAGCCCTGATGCAGAAGTTGCTAGACAAAATCAATGGCAAACATTACTTAAGAATG
ATTAAAAAGTAATCATGTCATCCTATTAGTGCGTCTTCAAGCATACATATAACAAGAAAT
TCTGGTATTCATCTGTGCTTTGCTGCGTGTTTATTGAAAAATATCCACTTTTACTTTCAC
AGGTGTTATATATTAATCTGGCATGTCATAAAGAGGGGCTTTCCAGGAATAATTCATATT
TTTTTTCACAAACTTCCTCTCTTTAGATATATAACCAAATCATGTCGTCCATATTTGAGA
TCCTTTTTCTCAATTTAATCTAAAGGATACTATTTGAAAGGCCGTGTGGCATAATAAGGA
TGTTACAATGCAAGCAAGTATATAACGATTTACGAAAACTTACTCAAAGGAAAAGAAGAT
TGCAACAGATGCCTCCCGCTTTTGTATCAGTGACCCCAGCGAGTTCGACAGGAAGAGGCA
GTCGACGACAAGAAGGAATAGCATGAAGGACACGATCCTTATGTGCGACAGCATTGGCAC
GGAGGGCGTGGTCTCAATGTACTCGACCCTCTTCTGCGCGAGCCAGTGCAGAGCCTTGAC
GAGGAGCAGGGCGGCGACCATGGCGAGGAAAGAGACGGAGAAGTCCTGGCGGAAGATGGT
GACCGCGAAGAGGATCTCCACGACCTCCCGCCACGACTGCTCGTTGAGCCGCTCGACCTC
GGCCTCCCGGAGCGTCCCCAGGAAGACGCGCTTCACGAGCTGCCAGGCGAGGCACATGGC
GACGAGGCCCGTGTTGAGGAGCAGCACGAAGCATATCTTGGAGGTGGAGAGGTAGACCAT
CGCCGGGTAGAACTGCTCCCTGCTGCTGAACGCATAGTACACCGACGTTACCGTCGCCAG
CAGGCTGAACGCGGCGTACGTCTGCAACCGGATCATCTCGGCCGCCGCCCTCGGCGAATC
CCCTCGCGAATTCCGCCACAAACCCTAAGGCACGCAACCAATAGATCACCTAGAGCAGAA
AGCGAATATCAGCGGCCCGATCCACAAGAGTTTTCTGCAAATTAGGAGGCGAATCGAAGA
GACGCAGCGCGCGAATCCATACCCTAGGCGACCAGGCTAAGTCAGAGTACAGTAGGTGCT
CGTAGTGGCTTACCGATACGAGGATCCCGGGAGAGATCGGACGGGGAACACGTCGGAAGA
TTTGATCCAACGGGGGCTCCTGCTGGCGTTCACGGCGATTTTGCGGCGAGAGGGTTTGCG
CGCCCCCTCACTCCCTCGTAGGCACGGACACTGAGCACCGCCGGGGGCGGCGGCGGAGTG
AAATCTCGTCCCGGGATGCGGCCGCGCCCCTATCCGGATTTCGTACCCTTGTGATTGGTT
GGATTGGGAGAAACTCTAGGAGGGGAGATAGCATCAAGGTATTCACCCTGTGAGGACCAT
GTGAGTGAATGGGGTGTGGGGAGGAGGAAGGAGGCGTGTTCGCTCGGAGAGAACGGGGGT
CTGCACAGCGGCGGCGAGGGAGATGCGCCGGTGGTGGCGTGTCGCTAGCCAGTGGGCGGC
ATCCACGTGTAGAAAAGACGTGTCATCTTCGGGTTTTTCTTTTCTTTTGAGGGGTTCATC
TTCGGTCACTGGGGACGGACGGACGCTCCAAGGGAAGAAAATCAAGATGGCAACCTCTAT
ACTTGCCCAATTAATTTGGTAGAGTAAATTAACGTGGATAAAGGAGAAAATCGGATATTC
TCCACTTCGAATATTTGGCTTCTCAAAATTGCTGATGTTAAGAGAAAACTTCATGGCTTA
AGAAGTACATCATCCTAATCATGTACAAGAACATCCATGTAAGTTGGTTGAAGGGTAAGA
ATACCTTGATTGCCCTTGTCATCGGAGACGAACATGACGACCCTTGCCTGCTTGGAGCAA
GAATGATGAAGGATTGTCGCAATCATTCGAAAAGTAGATCTATAGATGGCATCGAGAAGT
CATAGCGTTGCGATGGCTGACGGTGGTGGTTGGTCTTTCGATCCCCTTTTACACCCTTTT
AGGGTCAGCGGATAGGAATGGATGGGCTTAATCAGTAGAAGTGTGTGTGTGTGTGTGCAC
ATCCAGATGCGGGTTGAGTGAAGCTAGCATGTGGGTAGGTGGAGCAAATGACGATGACGG
TCACACGAAGCGAACAAGCAACAATCAAACGGCACGAGCAACGATGATGGTCGGGTTGGC
AACACGAATAGTTGTTCTTATCCAAGACTCTCCTAGATGAAATACCTATGGGATTAAAGT
TACATCAAACATGACAATATTTGGTTGAAATCGGATGAAAGGGAAGGTCCATGTTAAAAT
CAAAGGGGGGATTGGTGGGGAAAAGGGTTCGTAGGTTAATTTTTGCAACTAGACAACGTC
ATATGCACAATTGGTCTTTTTCTAGTGCCTATGGATGGGAAAAATCTACAAAAGAAAAAA
AATGGCATAGTAATGAAGGAGTAAATGGACCGGGTGGCAATTTGCATAATCCCTCTTGAA
AGTGGCAATGCTGAAAATCTACATATTCAAAGTGGAAATATTTGACTTTTGTAACACACG
TATTTTGTAACCTCGACATTAATTAAATAAATTCATGTTGAACCCTGAGTTATTTGAATT
GTTTTTCTCTCTTTTGAATTTTTACTGTTGTGCCTTGCATGATAAAAGTGTTCGATGACT
TGGGAAAAATTATATGACCATTCTACTTCAAATTTGAAAGCCGACTTTCTACCACTAATT
ATGACATAAGTATAGTTCACAAAAATAATTATTTTTCAAAGTATTTTGCCCAAAAGCTAT
ATTCCAAATTTAGGTTTTCAAAAAACCTGAAGTCATAGCTTGAACTAAAAGTCTATGATT
TAAGTGAAATAAAAACCTTGCAAGTTATTTTTGGATCCTACAAGTGCTAGAACATCCCAA
AACCATAAAATTATATTTTTAAAATTTATTTAAGTACTTTATTTAAAGTTTTTTTCTTAA
GGACGGAAATGGTCTTTACAGGGAAAAGAATTAGGATTCAGAAATATTCAAGAAAATTTA
AAGAGACTGAGAGGACATATAGTTTCCATATATAAGAGGTTCAACCCATGGTCACGTTAA
AAAATATCCTAGATCTACATTTTCCAGTTTTGTCCATTTATACGGTTTCAAATTATTACA
CACGGACTTTTCTCCTAAAAATCCCAAATAATTATTGAGTGTGTAAATGCTATCAAGTAT
TCATCCTGCCAAAGTGGAGCCTTTGGTTAATCCATTTGACATGGATTTCTTCCATTTTTC
CACTTCATGCAGAAACTTATTTTGAAATTTAGTTTCTCTAAATGTCTTCAAAATTTTACC
AGAGCTTAACCATACCATGAACAGCATCGAGTGCAAACTCCACCAGTCAATTTGACCAAA
GTAGTGGCCAAATGGATCGATCCAACTTTCTAAACAAGGGCAGAGACAGATGGAAGATGA
TTTGCAGCTCATATTACAATGATGTACAGGTTACACATGTATACACAAGATTACAACCAT
CAGGGCCGAAAGAGAGGGAGGCCCATGCGTAACTGACGTGCACGTTCCTCATGATGGGCG
CACGCCAGGCGGTGCGTCGAGGGACTCGGTCATGCGATTACAGAAGGCGTCTTCCAACGG
CCCCCTGCAGCCGAAACGGGGTCTTCGACGACGTTGAGGTTGGACCGGAACTCGATGAAG
ACGCTTGTTGGAAGCCCCTTGGTGAATACATCGGCGTACTGAGAAGAGGATGGGACGTGT
AAGACACGGACATCCCCGAAGGCAACACGGTCACGTACAAAATGAAGATTAATCTCCACA
TGCTTGGCGCGTTGATGTTGCACTGGATTGGAGGAGAGGTACATGGCCGAGATGTTGTCG
CAATAGACAACAGTGGCGCGCTCCGGCGGTTGCCCGATCTCCTGCATGAGTTGTCGTAGC
CAGCACGACTCGGCGACCGCATTAGCGACAACCCGATACTCCGCTTCCACGCTGGAGCGG
GAAACGGTGGTTTACCGCTTCGATGACCAGGATACTAGGTTGTCGCCGATATACATGCAG
TAGCCAGAAGTCGAGCGACGAGTGTCGGGGCAGCCCACCCAATCAGGGTCGGTGTATGCT
ACGATATGAGACGACGCCGACGGGTGAAGGTGGAGACCGAGGTGTGAGGTGCCACGCAGG
TAACGTGAAATGCATTTATGGAGCAAGACGTGAGGTGTGCGAGGTGAGTGCATGACGAAG
CAGACCTACTGCAAGGCATAAGCGATGTCCGGGCGCGTGAGTGTTAGATACTGCAATGCG
TCCGCAAGGCTGCGGAAGAGCGGTGGATCGTAGGCGGGTTCGCTGGAGGTAGCGGAGAGC
TTGTGAAAGGACGTGGATGTCGC