Contig Data
morexGenes
Links



Map Locations of contig_2549141 (4814 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2549141

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37805 1 1141 bp AK368322 Available Available None





CDS Structure of MLOC_37805






Contig Sequence (4814 bp)

>contig_2549141 4814 assembly3_WGSMorex_rbca.fasta
GCGGTGCAGGCAGGGAGCGGAAGGGCGCCCGACCGTCGCGCGCAGCGTCGACGAGCTCGG
TGATGTGCCCGAGCCAGGCGTTGTAGCCGTCCTCGGTGGGACGGTAGCACAGCAACTCCT
GTGCCATGAGCAATGCGGAGCGGGAGGGTCGCGACGCGCATGCGAGGAGGCGTGGCGGAG
CGGCCACACGCCTCCTCGTTTATCGACGGGTGAACACCGGGGCACCTCGGGCGGCGGGCG
CGCAGCACGTTCCCGGTGAGTGGCGGCGTCGTCCATGTCGATGTTGACGTTGAGGTCGAA
GGCACGAAGGCGACAAGTCCCCCTACCTGGTGCGCCAAATGTCGGAGTGTGGGATCTGCG
TCCAAGAAACTCTTTCAAGAACTAGGGTTCGAACACTGGGGGGCTTTCCTTGGCAACCGA
AGACCCCACGACAACTACGGCGAGGCCACGACGAGCGTGCTCACTCACACTAGACACGAC
GGGGACGCGCGAGCTACCCAGGATCGGGCCACCGTTCGGTGTAATACCCTACTCCTGCCT
GTGTTGGATTGCTATGTAATGGGGAGCTTGTGGCTCGAGGTACATGAGGAGTGAGGGAGA
ATGATTAGATCCCCTTACATGGACGCGGCCCTGCCCCCTTTGTTGTGCCTTGGTCCTCTT
CCTTAAAAATATGAGCAAGAAAGGATGGCCATAGAGCGGCTATTCTAAATTGGACAGGCG
CCCAGGTCTATCCTGACTAAAGGCGGTCTCCGCCCGATAAATCAGTCATGTTGACGCGTC
GGTGGGCTCGGCGATGACCTCCGTCCTGACCCGCCGATCCATCCCGATCCTCCTTGCACC
AAAGAGGAAACCTTTAGGACTTGCTTTGGGGGAGGCAGCAGCCGCTGCTCCCTTATCACT
AGAATGGAAACTAGCTTCGGTCATGCCCTGCCGTCCTCATCCTAACAGCAGGACGTCATC
CATGTAGTGGGCGCGGAGCCCACAGCTGGCGCCGTACGTCATGCTTTGTGAGGCGGCCTC
GCAAGGGGAGCTTCGCGAGGCGATCTGGTTGATGGCCTCGGCAGGGCTTGGTCCGGCGGC
GAGGGGCCTCGCGAGGCGGCTTCCTCCGGAGCGGCCGTGCCCAAGCCATCCTCTGCGGGC
CGGCCCAAGTGTCCCCTCCTGGGCTGGAAGCAGACGGGCCGTGGTACCCCAGCTTTTACT
GGGCCGACAAGCTCAAAACTCTGTTTGCGTTCCATTTGCTCTTGAACTCGTTATCCTAGC
TTTTTGGGCAATATGGACCCCTAGGAATGATTGCATCTTCAATGGTTTCAGCCCCAACCG
TTACAGATGCAGCAAAAAATTCAAAGAGGCGCTCAAGTGGATTCTGCTGAGAGCTCAAAG
GCAATCCTACGACAATTTTGAACCTTAGGTCCACTCTTTTATATAGTGCTGCCTCAGGTT
CAGTTGTGGCTGTTGTATGGCTCTTTATTTTCAGCCTTCTTTTCTTTTTTATAGGATTCT
TTCTTCTTATAGCTTTAGCTTTTGTCTTGGGCTTGTTTTGCTTGTTTCTGTTACTCTTGT
ACTCCCTCCGTAAATGTATATAAGAGCGTTTAGAGCACTACTACTTTACATAGAGAGTAC
TATTTAATTTATTTGAAAATTAATAAAAACAGACCGCACATTACATACATGATCCAGTGA
TGGATATCATATCTGCTCGCTCATTGTTTGCAACCCAACACTAAAATTATTGACATGTAG
CACATGTCAGGGACGTTACTGATGCTAAGAGTTTCTAACACGCCCATGCATTTTTCCCCA
CAGATGTGTCGCAGCAGGTCCAGGACAGCCTCCAGAACATGCTGAAGATGACCGGCGAGA
TCGAGCAGTGCAGTGACGAGATCGAGACGGAGATCGAGCAGGCCAAGGAGGGCGTGGCTG
ACAAGTACAGGGTGCTCGATGAGGAGAAGGAAAGGTTTCAGAAGGTGGCCCTTGCAGCGC
TCAACATCCTGAGCGGCGGCATCTGAAGCCTGCACCACCTTATGTCAACAAAGACAATCC
TGAACTGCCCCGCTTTGTAGATCACCGTTCATGTGCAATCCCAGCAATGAGCCGCCAGTT
GTATTCCTTCATTTGTGACTGTTGCCAATTGTCAGGTCGTCACCAGTGTTAGCCACCATT
CTTTTGCTTGGCCTGTCAGCCACTCGGACCAAAGCGTGGTGGCAGTGGCAGTGGTACTAG
TTTGTACAGGATGGCTCTTTCAGTGAACCAGAGCATAGCCGTATAGTCGGTGGTTGTGCG
TTCTTGATTCTCATCGATGGTTTGATAATACGAAATTACTGTTAATTCAGAGAGATTGTG
CTGTTACAGACAGGAGAGCAGAGAAGCTATACATTCAAAGAGATTATGCCAGACATGGTT
TTATAGGGAACTGCTTGCCGAAGCTGCGGTTGCCTCGGCTTCCATCAGCAGTGAGGGATG
GGGTTGCCTCGTCATTATTCGAAACGATCGAGTAGGGATCATTAAGCTCAAGTTCCTTCT
CTTGTGTTTTGTGTTTTGAGGCGATGTCACGAGGCAATGTCAGGATTAAAGAGCAATTTC
GAGAAAGGTGAGGCTCTTGTCACGGGAGGGGACCTTTGAGGACCAATTTTAGAGCACCTT
CAACAAAGGCACTAAATAATCTGCGCGTTTAAAAAACTAGCCATATAGCTGAAACAAACT
GCATGGCGTGCATAATATTTGGTACTGGCCGTTCCGGCCAAGCTCGCCATCGCCTCACCC
TGTGCCTCCGTCGGTGATGGAAGGCTGCGTCGACATCCCTCGACCCCTTCCTACGTCCGT
GACCCATCGGCCATCACCGCCGTCGTAAATCCTTGCGCAGGGTGGACATCTGATTTCGCT
GCCGGCGGAGCACTGACTCCAAGAACCGGTCTCGAGCGCGGCCTTTTCATGGCGACTCGG
ACGGACCGTTAGGGTGGCTTCGCGTCCCCGCCCACTTTGAAGCCATGAATCTCCGCCATC
AAGCGACCGATGGTGGCGGCGACGACGATGTTGACGTCGGCGGGCCAAAAGAAGAGGAAA
GTGGCGAAGGGGAAGAAATTGACAGCACCCTCGCCCCGCCTCCCCTGGCCGCCAGAAGCA
CTTGAGGAGTCGCAATTTTGTGCACGGGCGGCCGATGCCCAAATGATGTTTGATGAAATG
CCTATAAGGTAAGATTTTTCCATTTTTCGTTGTTGCTAGAAATGTGTACATAGGAATAAC
TTGATATATTTTTCTTTATCATACTTCATAGTGAATACTTCAATGATGATGCATATTTGT
TAACTATGGGTTTTGGCTCCAATAATTTTTATTGGCCTCAAACCAATGAAGTGCATCAAG
ATGATCATGAATATGAAGTGGACGAGGATAGTGAGGGTATGGTTGTGCACCGAGAGGAAG
GGCGTGTAACTACACCGTGGATGAAGATGAGGAAGAAAAAAAAGCAAGAAGATGGAGTAT
GATTCTTGATGTTTCATTTGTTTGTGTGAACTTATTTGTCATGAATTTGCTTCTGGTAGA
TGATTTTGAACTATGTCATGAATTTGAACTATGCTATATTGAAACTCATCATTTTGCAAA
ATTTTAATGTTCAAAATTATGTTATTTTTTGTTCACAAATTATTCATATGTGCCAAGCGG
CTAGGAGCGTGCTATATTCTACCGCACCTGCTGAAGCGCTATAGTGCGCGCTAAATTTTT
TAGCGCCTGGAAAAGATATCACATGTCCGTACACGCTAAAACGTTATTCCGGCGTCCATT
TATTTTAGCGCGCAACGGTAGCGCATGTGTTGGAGATACTCTTAGGCCAACTCCAAGTCC
GTTTTTGGATAAACGTACACAAAACGCGACCCAATGCACGGGAGCAAACAAAGAAATGTT
CGTTTTCTGTTCGCTTTTGACCCTTATTTGGTCCAAATTTGGACCTCGTTTGTATCAAAA
TGGACAGCGCAAGGACGGACGGGACACGCGCCATTGTCCTCCAATTGCCCGCCCGTGGGA
GACACACCCGTCCACTTTCCCTCCCTTTCCCCAAAACCCTCATGCGCTCTCTCTTCCCTC
TCTCTTCCATGGCCGGTGCCCCGAAGAAACCTCGCGACCCGGCATTCATCGCGTGCCCTG
CGGCGAAGAAAAAGGGCCCGAATAAGCCGCGATCGAAGCTCACGCCAAAGGAGCTCACAC
ACCTCGCCCCTGAATCGGCTAAGAGGAAGGCCCGATGGATAAGGGAGGCGGAGAAGAAAA
TCGTTGTTGAATACATCGCCGAGACCCCGGCCGTGCAGTAGGCCGTGCAGCACAAGCCCG
CCATCAACCAGAATGAGACCATCCTCGCCAACCCCAAGCACACAACGACCACAAAGGCCC
TCGTCATGCTAGGGTTGTGGCGACCTCGGACGTCCATTTTCTCCGCCACCACCATGGCCG
CGGCGAGCACATGCTTTTTGGTCGTTTTCCCTCAGCAATACCAGTCACTGATCTCCTCCA
TAACACCGAAGACACCCTGGTTTCATCCGCCGCGAATGCATGACCAGATACGGTTCTCCA
TGTTGCCGGATGGCAGCATGACCGCGTCAGCCACCCTTGCCATCCCACACATCATCGATC
TTAACATCATGCATGTTGCTGGCCAGTTGTCCGATGGGATGAAAAGGAAGTAGCCCCGGT
TAATGTTGGAAATATGCCCTAGNNNNNNNNNNNNNNNNNNNATTATTATATTTATTTGTT
CATGATGATCGTCTATTATCCATGCTATAATTNTATTGATTGGAAACACAATACATGTAT
GGATACATAGACAA