Contig Data
morexGenes
Links



Map Locations of contig_2549128 (6249 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2549128

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37796 5 2014 bp AK249748.1 Available Available None





CDS Structure of MLOC_37796






Contig Sequence (6249 bp)

>contig_2549128 6249 assembly3_WGSMorex_rbca.fasta
GAATTTTGAGACGGAGGGAGTATAATCTTGTGGAGGATGGTATATAATAGCTCACAACAT
TTGTTTTCATCATGAAGCCATACCGTCAGAGAGTTCAACGGAGGGGTTAGGGACCGGGAT
TCTGAGTATGCTCAATTTGTGACCAGATAGCAAAGCCTTAACCTGCGGCATGCGAAAAAA
ACGATGTTTGAGTAAATTATTGAGCAAAGAAATCGGGTATACTAAGAAATTTGCAGCAGT
CGGCAAGGAACCTTGTTACTGGCTGCTGTCAACGGGCTCGTAACTTCGTCCCAGACCCAT
GCATGTGTACCATGATCCTCTGTTGATGCTCGACGGCCATACCTGATTTGAGGAGGGTCG
ATGGGACTACTCGACACTAGTACGGTCGGAAGAGAAACACATATTGTCAGCACTCAAAAT
GTGAAGATTATATGGATAAACACACTTCCCCTGATTGCAAGTGGAATTACCAGAGAGGAC
ATTGTTGCCACTTATTGCGAGGGCGCTCCATGAGTGATCTGAGTCTTCTGGAGTTATCCT
GGTTACTTCCCCACTGACAAATGAAACACAGACACAAAAAAAAGGTATGAAAAGTGATCC
TTTAAGGTCTGGAGAAGGTGCATATTGCCGGCAAGTTTTATTTATTTACTACCTTAACAC
ATCTATTGACAGTATCACTTCAGTGCTTCTCCAAGCAGATGTCAATACCATCGTGCGATG
ATCAGAAAGCCAAGGATCAGACAGCATGGATGAGCAGTATAGCCCAGGAAAACATCCATC
TTGAGGGCACATTACAACAGGAACCTGGCGTAATTCAAACGGTTCAGAGCGCAGATCATA
GTGGGATAAGCAGATTATATATATGGCCATACCACATCGGTCGCGCTGAGTTGTTGATCT
GCTTTCCAGTCAGAAGGCCAGTTGATCCGATGCAGTGAATCCGTGGCATTATGCGCTCCA
CTATCTACTGCACGTTTTGAGGATAGAAACACCAGGAGTTTTCCATCCTTGCTTTTGACA
AAAAAACATGAGCCATTCAGTGAAACGTATCGGTTTGAGATCCGAGTGTTCAAGAAGGAG
CAAGATTGTTAATACAAGCATACCTGAACCGTGGAAAGAAAGCGCTGCTTATGATTGGGG
TTAAGTTAGTTGCCACTGAAGCAGATGATGATTTACTACCACTGGAAGAATAAAAAAGGA
TGTATCATATTACATACAGTTAAGAGTCTGTTTCTCCTTCCATTTGAACAAAACAGTAGT
ATGCAGATATTATAAAATTCCAAAGTTACAGCATGAGCTCACCTAACGGACGTGTCTTCG
GCATTTGGTTCTTCTTCAAAAGGGGAATGAATCGCATAGAGAGAACATGGCCTGTTAGAA
CAGTACTTGATGCCGAGTTTTCTAGCGGTGCTCTGAAACCCGTTGCGTTCTAACCATCCG
ACAAAGACCAAAAGATTTTGACGGCCTCTTGAAGATGGCGGAGCCCAAACAACCTGACCA
ACACTCATTGATTTTGTAATGCCTCTAGCAGCACGTACTTCTCCGCTGCATGCACGAAAG
TACATCAATTGATCGATACCTGCTTTGGTTTAGTATAAGCCATGTTTCTGATGGATGAAG
GATTGGCAACAGTCATGTTCATTAGAAGGTGCTAAGAAGGAGACCTGGCAATATCAAGAA
CAAACAGTGAGGGTCTCCCCTTTCTGGAGTAAGTTTCACCCCAATCCTCTTCCCAATCCC
CCTGTCCCCTCCAGCTATTACAGTCTTCTTCAGAAGAGCCTCCTCTCCTATACCCGATAT
CGTCGAAAGCTGGTTTTGGTTGAGGTGTCTGTTCAGCGATGTACGCTATGAAAGTTTCTT
CTTGGTTCCAGGAAATCCCCTGAAACCTGCAGTAGCAACAAGCATAATGTCATATGTTAC
ATATAGGGGTGAAGAGGCTGGAAATGCAGGCAGTCTTTATGCTGCACATTTACCACTCAT
CTGAATAAAGTGGACCATGGATAGACTGATCAACATGTATCTCTTTCTGCACATGTGATT
GATTAAGAATCTGAAGTCTTGTACGTGAACCTTTCTCCCCATTCCGCACCACAAGAAGCT
TCGACCCCGAAGGGGATGGAACGACAACCGACACTCCTGTCATTTCAGTAGGGAAAGGAG
ACCAGTGACACTCGACAGGCATGGTTGCACGTGTCACAATGTGAGAATGCAAAATACATT
TCCTCTTGTTGTTCGCCAGCAGGTCCGGTTGGCTAATGGAAAACATTGCTGTGGATCTGT
CTTCTGCAATGACGAAGCGAGGAACGAATTAATTAGACCAGCTTTGATGTAGCTCCTGAT
CGGGAAGAAGTAGATGATGATTGTGAATGAGGCATGTATATGTAGAAATAACAGTCCTTA
CCATTGTTTGTCTTGAAAAGCCAGGCACTTCCAATGCTAGGGACATTGGTGAATTCTTGC
AGCAACTTCGACTGCGAAGCATATTCTTCAGATGACATTGCATCCATTCCCAACGGATTT
TCTTCCTTGAAAGCAGATAGTATAGTGGGCTAACCTGAATCTGCAGCAAGGGAAATATGT
TAGGACAGCGATACAAAGATCAAGTATATTTTCTTGTTGGTTGCTCTGACAAGATAAGAA
AAGTGAGGGCAGAATCCTCGCTTCGAACATCAGGATGTACTATATGGTTAGGAGTGGATG
CAAGTGCGTCGGCCAGGCGGGCCCATTGAACTGTTCTAGTAAAATGGCTTGACGAAAATT
AAAAATACGATATACAATTAAACTAGGTTGGAATTTAATCCAAGTGAGATCACTGAACAT
GCATCCCGAGGTATGATCTGCGCACCACTCAATCAAATATCATCTCAACTATTGTGTGAT
CCAAGATCCCGAGCTAATATAGTTTTGGATGCAAACAGTAGCTTCAGCTGTTCTTGACTA
ATTTCATTATCAGCCAGACCCAACCCACAGTCACAAATAAAGTGCCACCACTGCCCCTGA
ACCCAACAGAAATTCACGAGAAAATATGCTGGATAATCTGAAAAAGATGACACACTGCAA
GCTGCTTTGATGCCTACCTCAAAACACTGGATTAAGGAGAAAGGAGTTCTGCTGCTTACC
TTGTTCTGCTGCTTTTGCAGTGGAGTAGCAATGGCAGGTCCAAGAAAGACTCCCGGCCGG
TGAGCTATAGAATTAAGGCCATCAGTACCTTGGAAAGACAAGACACCTCTCATCCCATGT
TACCAGACTGCCTTGAGATAACAACCTGGCAGCAATCATTTGATCAGATGGCACCAAGTT
CTGTTTCCCTTTTTTGTCAGAATGTCACCAAAGTCTTCAAAAGTATTAAAAGTTGCAAAA
ATTAAAAGGAATCTTAATCATGCATTGCATTGCGTTGCATACCACCACAGGCAATAAGAC
AAAGGGAATCAAAAGATAAGGTTTGCTTCTGATGTGCATATACACCACTCAGGAGTCAGG
ACACCACCGAATGGCAGCATCTTGTTGTCATTTTCTCTCTACTTTGTTCTCTTGTCATTT
TACTTACATTTGCAGTGCAATTTAGGGTAACATAATCATGTCGTTTTGGTAGATACTACT
CAGAACCAGATGATCAAGCGGACAACTTATGTGGTGTTGATGCAAGTTCTACTTGTGGTG
TCGATCACCTAAGAAATCTATATATACCCATGGGCGATGGATTACACGATACAGAACGCA
TGTTAAAGGCACCAACAACAAATAAATACATGCGGAATTAGGGACATGAAGTTTGTTAGT
TTGTTCACAGGGATGCACATGCCGTTGGCAGTTGCATTATTGACGATAGCGAGTTCAAGA
TGATAGAGTGAATGGAAATAGCAGCGGCATGATGGCGGCGGCTGCAAGAACGGAGGAGGG
CGGTAGCTGTCCGAGTCGGAGTCGGCGATGGCTTTGTTGCAGGCTTAAGAGCATCCTATT
GAGCGCTTTAAGCGCGGCAGAAGCAAACCAGCGCCCGCTACAATGACTAGTGGGCCGGCC
CACGAAAGGAAAAAAAAAGCAGCAAAAAAGGTGCATGTACAAGGATTCAAACTCGCGCCT
TCCTAATGCAGGTATGGTGTGTACCAAACCATACCGCCTTCCCCATTGTTATAGCAACGG
AAACTTTGTAAGAAACATTACAACCGTGCTATTTATTTATTACGCACTACGCACTAGCGC
TTACATTTTTGAATTATATGGAAAAAATTGATCTCTTATTAAAACAGAAGTTCATCAATT
GTGGCCAAAAGTTCGTGAATTTTTATAAGGTTTAGGAATCTGAAAAAAAAATTCATCAAT
TGTACAAAAAGTTCATGGAATTTGAAAAAAAGTTCGTTGAATTCGAAAAAAGTTCATCGA
TTTTGAATAAAAGTTCTACCAATTTGAAAAAAGGCCATCGAATTGCAAAAAAAGTTTCAT
AGATATATAAAAAGTTCATCGAATTTGAAATACATCAACTTCGAAAAAAGTTCATCAATT
TAGAACAAAGGTCATAGAATTAGAAAAGAGGTTCACCCAATTAAAAAAATCATTGTATTA
AAAAAAAGGTTCATCAATCTCAAAAAAAGTTCATCGACTTGGAAAAAAGTTCATCAACTT
TGAAAAAAAAATATGGAATTTGAAAATAAAATTCCATCATATTTTTAATAAATCAATGAA
TTTGAAAAGGTACATCGGTTTTGCAAAAGTTCAAAAAAAGGTTCATAATTGTCCAGAATG
TTGATCAAATTGAAAAACTTTCACCCATTCTCAGATTAGTTCATATAATTTAGGAAAAAG
TTGATCCATTTTGAAAAGAAACTTTATGAATTTGAAAAGAAAACCAGTTATTTAAGAAAA
AACTGTAATAATTTGAAAACTGCCGCGCATGAAAAAGGGATAAAGGAAAAAAGAAAACAA
AAAGAAAATCTCGATTCACAGCGAACTTTAAAAAAAAATTCATGGCCAGAGTAAAGATAT
GAAGTTGGGTGCGACTCGGGATGTCACGAGTTCGAAGTGCCGTCGCTGCACCCTTTTTTG
AAGTTCTGAAGAAAATTGGAAATCTGGGCCGGCCCAACTAGACGCACCTGCAGGCTGCTA
CAGCCGCCGATTATCTGGAAACAGAAGAAACCGAGGCATGTCTTATTTGGCGCAACAAGC
GTCAGTTAACATGCATTTATGTTAACTTGCGCCTGTGGTGTTCGTGAATGGACCGATCCA
TCTAGGCGCTGTTTAATTTTTGTTTTCTAAAAATTGTATGAACTTATTTGAATATGGATG
AAAGTTTTCGAAATTTCAGAGAATATTTTTTAAAGATTGATTAACTTTTTGAATATTGAT
GAATATTTTTTTAATTTTGATGAAAATCTTTTTGAAAACAGATGAACTTTTTAAAGATTT
ATGAACGTTTTTTCCAGTTCAATGAATTTTTTTAAAAAAATACATGAACTTATTTTGAAA
TTTTAATAAATTTTTACAATTTTATTGACCTTTTTATGTATTTATTGAACTTTTCTAAAT
TGGATCATCTTTTTTTCAAATTGATGAAGTTTTTTCAAAATTGATGAACTTTTTAAAATA
TATGTACTTTTTTTCAAATGTATGCACTCTTTTTTTATATCTGTAAAGCTTTTTTAATTT
CATATTTTTAATTTGTTAATAGAAAATATCAAAAATAAACTGGACATCATTCAAATGAAC
CGGCCCATGCCAGCAGCGCTGCAGGCGCCAAAATATTAACGAGCACCTGCAGCGCTGCAT
AGGAGGTCCAGAAACCGGTGCCTGTAGTGCTAAATAGGAATTGCCAGCTCCGGAGGAAGG
AAATGGATAGGCCACGGGGCTGGCCCATTAGGGGTAGTCGCTCGCCAGCGCTTGCGTGCC
GCTGTAGTTCGCTGTGTTTTTTTCTCTTCTTTTCTCTTTGTTTTCTCAAATGGTTTTCTT
CGGTTTTGTTATATGTTGATTTTTTCCTTGTGTCTCCAATTGTTTTCTATGGTTTATTGT
TTCTTCATTATACTCCCTTCAATCCATATTACAACGTGTTAGATACATCCGTACATTGAT
CAAATCAAAGACAAGTAATTTTGGTTTTTTCCATTGTTTTCTTGTTCTTCTTTGCACTTT
TTATTGGTTTTTATTTTTAACACATTTCTAATGTTTTTCATTATAATGCCCCTATTGAGT
CTCTAGTTGACTAGCTCGTTGATCAAAGATGGTTAGTGTTTCATAGCCATGGACAAGTGT
TGTCACTTG