Contig Data
morexGenes
Links



Map Locations of contig_2549106 (2830 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2549106

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37788 1 1319 bp MLOC_37788.1 Available Available LOC_Os05g38560.1, FRAME:-1, EVALUE:1e-12, 13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative





CDS Structure of MLOC_37788






Contig Sequence (2830 bp)

>contig_2549106 2830 assembly3_WGSMorex_rbca.fasta
TACTGTCAGACTTATACCCACGACCTATGGATACAAATATAAGATCACCAAAGTCACAAA
GTACTTGAAAGGAAAAAACGAAGCACTCACCAGCCACTCGTGAAGTTCCGCTATCTCTGA
ATTGCTGCAGTATCTGAAGATCAGGATGAGAACGGGTAGTTCCAGAAGCTGTAGATGTGC
ACTTCTTCTTCCGCAGTGTTACAAAACACATGTACACAGACTCAGGTCTCCACAGCTATC
ACAAATCACACTTTACATAATACCACCGTGGCAAGTCACAAAAGTTATCAATCCAGTTCA
CCTTCTATGAGTCCATGATACCAGCAGGTCAGAAGATATAGACAGAAGACCATGGCTTCC
ATGGATACACCAAATGTGCATGTCTCTAGCACATCATCTTGTTTAAGAAACACCTTCCGG
CAAGAAATGGACAGCTAGTCTAATTTTCTGACGATTGACACTTTCAGAGTAACACCATCA
ATAGGACCAGGACCAAGCTGCTCCAGCCTAACCAACTGACTGATACTGCTGCATAAGCAA
CTACTACCAAAACAAAAACAAAACATGGCAAGGCAAGGCATACCATTGGGTTGCTCTTAC
TAACGATAATCACGGCAGGAAATAAGCCCAACTGATTGGACAGAACTGGGTTCCGCACCT
ACATTGCTACGAAAGCACAATCACATGGCAGAGATTAGTAAAATAATTTTAGTACAAATC
AAATCGCAGAAGCAGAAGCAATCTCTAACAATAGTATACTACTTACAAATAACCATAGTC
AACCACTATAGTAGAATGTCTCCCCAACGACAACAAAAAACATTAAACTGCAAATGGCCA
AACATGGCAGAGTTCAATTCAGATCAGAAGAGTACAAAACATTAGCATTCTAGATCTCAG
TTTGCCAAAATCTGCAGCAACCGTAATTCAGCTCTTAGCAATCACTAACAACGGTACAAA
CCAAGGTTCTCCGGCAGGCTGCCCGATTGACTCATGCTTTACTAAATACTAATGGACATG
GCAAGAACGAGACATTGAGTTGCTTTTATTCTGCCTTACCATGTTATTGATCATCACAGC
AGCAATGCTCAGAGTGCTCAATAACAGCAATCGGCTAAACCCAACCCATTGAACAACAGT
CAGTTCGGAGCCTACTGTCAGCAGATCGTTGAACAATTTAGTCGGTTTCTGCCTGGTGCA
GAAACAGAGATTACCACACCCACCTAGGAACTACTTGATATATGTGCTTGTCCTACTATA
GTTAATCAGCATGTGTCTCCTTTACCTATAAAATCTTTAAGGTAGTGTTACAACTTATAT
CAGTGATATTTAATTCTGTAAGGATTTCACATGTTAGGACAGATATGTACCTGTGGTGAA
GAAAATATGTATGTCCAACAGGACAAGGATGGAGCACTCTGCTCCAAACTATCAGGTTTT
TTATGTCTGCCTGCAGATTTGCTTACCTAGATTCCTAGAAGCTACATGGTTTGTTTGATT
TTTGGGTCTTTCTGGAAGGTAGATTCTGGGAGAATTAAGTACTTTGATATTGAGATGATC
TCTCCCTAAACCTGCATACTGGTTATGGGAGCTAAACTGACATTGCACCGACACTTATTG
ACTCCAATCCCTTGTGACGGACAATGAATTTAAACTACATGTGTTTCAAACCCCTTTAAA
GCTGCACAATTGATGGTGTTGGTTGTATTGCTCCTAAAATGCCAAGACAGCTGAAGATGA
TCTGTACAGTTCAATTGTCTCTTGCGACATGAACTTACCGTAATTTCCTTGATGTGCTGC
ATCATGGTGTTGAAGTGACCACTAACCACGCGAGTCCCATTGCCATTACGTGACCTCTGA
ATGTAGTTTTCTCCTCCTAGCATTGACATGGAGTTGAGGATGAGTCATACTGTAAAATTC
TCTAAACGGTCCATGCTTAACTTGCCAACACAAACCCGATAAAATATATAGTATTTGTCA
AATTATCAAATAAACATGCTGACCAATGTTGCTATCAAATAAACACAGAGCTACAAAGAT
TGCGGCAGTTAACAAAAAAAAATTAGGGCTATTACAAAACGCAGGTGCCAAGATTCAGAT
CACCACAGATGTCACAAATCCAACAATGTAAATAATACTACAATGGTAACCAGTTCACAT
AAGTTATTGATCCTTCAATTTATTTGCGGATAGTTCATGTTCTGTTCAGTACATGATACT
AGCAGGTCAGAAGCTACAACCACAAGACCATTGGAAACACCAAATGGGCACGAAAGACTT
GTAACTTCTCGTCAGTAGAAGCGAGCCAATAAAGTAGCATGTCACTAGAATATAGTAAGT
TTCAATGTATACTGAAACAGGAGTGGCAGAACCCTGAAAGTTCATAAGACATTCCTTGAA
ATTAAACACAAAGCAAGCAAAGCGGTACTGAAATCTGTCATGCAAAACAAAGAGGATGAA
TTGAATCCAACTACCAAACACGACATCAAGGCGGTAACAATGCTAAAACAGAAGTACAAC
TGTAAACCAGAGGAAAAACTATCGTTAATTCAGAAATTAAGGTTGCAAAGCAAGTCACAT
ATCAGGAGCTGCATATTTCTATTCCAGATTAGAGCTTCCCAAGAGCATCACTGCATAAAT
ACATCCAACAAATTTCATCCATCACTAATTCAGACAAACGAGTGAAACACCAAGGTAACT
ACGAGCACTGCCAGACACTAGCGATCTAAGAGGAGGTGAACTTGGTGACGGCCTTGGTGC
CCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGAGGACGAGGCGGACGGAGGTCTGGA
TCTCCCGGGA