Contig Data
morexGenes
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Map Locations of contig_2549102 (4923 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2549102

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37787 2 4295 bp MLOC_37787.2 Available Available LOC_Os02g22090.1, FRAME:-2, EVALUE:0.0, 13102.m02476 protein pattern formation protein EMB30, putative, expressed





CDS Structure of MLOC_37787






Contig Sequence (4923 bp)

>contig_2549102 4923 assembly3_WGSMorex_rbca.fasta
GACGTCGACGCCGCTCCGGCCCCTGCGCCCTTCTCGGCCGCGCATTGCGTGGGCCAGGGC
AGCTACTCCGTCGCCACCGCGCCCGGCGCCAAGAGGAAGCGCGCGGGGAGCTCCGGCGTC
GACCAGGCCGGGGACGGCGACGGCGACGCGGACGGGGAGGCCGCGTCCCACTCCCACGGC
TGGGGCGCCGTCGGCCGCGCGTACCGGCACAAGCGCCGGGCCCTGGCGTGCAAGCGGCAC
ACCGCCAGCTCCGGGTCTCTGCTGGCGGGGGCAGACCGCTCCGTGGAGGCGGCCATGGCG
ATGGCCAGGGTGCGCAGCCGCATCGGGACGCCGAGACTCGGGCGGCCCTTCTCCCGGATT
TCCTTGGAGTGAAGTCAAGATCGAGCAGCAAGTATGCGATTCCTCGTGCATTTTGCTGCT
TCTACAACTGCTGAAGCAGATCAAGTACCACTACTAGTTCGTCTACCTAACAGAGTCGTT
CAGTTAGCTTTCTAGTTAGCTGCTCGAGATTAAGTACTGCAGTACTACTACCAGTTCAAC
GTTTGTAACATGAAATTGATCATGTATCAGTTTCGTTCCTTGTGATCTGCAAGTGCCCCC
TCACATTTTACTCAAACTTGACCATGGATTTGACTAGTACTATATGAAATCCAAGTTATT
TATAACAAAAAGTATACTGGTAGTACTACATTCGAAATCATCTGCTTCTAACTATAACCT
ACAAATACATAATTATATCCAGTAGTACAGTTTGTTCATCTAAACTGGGACCAACCTCCC
CTCAGAAACTGCTGGGATATCCAGCTTGCTTTGTGCACCTTGTACTGCATCATCATAATC
AGGGAAAACTACCGACTGAAGCGAAGGCGCCATCTTGTTAACGTGAAGCCATGTTGCTTC
CCACAAACTGCTCTCCCCGCCGGCGCTCGTCCTCGATAAGACCCCGCTCGCTTTCATCAC
CAGCAGCATGTTCTTGAGTAGCTCTGTGGCAGTCTCTTGCAACCTCTCAGTCCTGCTGCC
CCCTCTTACTTTGGCTTTCATGAGCTTCTCTGCCATGTCCAGTACCTCCACCCACAGCTT
ACTGAAACCGCTGTGCGCCGAAAGATCGTTGAGTGACTGCAAGGATAGTTTGGATAACAG
CTTTACAGCATGCAAGAGGGAAGCTTCCATGTTTCTGAAATGCTTTGGCGAGAAATTCTG
CGCAATCTCTAACAATTCGTCGAGCAACTGGAAGACAATGTCGAATGACATCAACCAGGC
CGAAGATGGAACCGACATTCCATCGACTACTATGCATCTGTGCAACAATACCAGAGCATG
ATCCCTCACCTCTTCTCTCTGATCTGTACACACCTTTCGCAGCGCCTGCACTAGCCGCAG
CCACATCTCAGTGATTCCTTCCAACATCCTTTCGGCGTCTCCACCAGCTTCCTTAACCTC
ATGTGACCAGTGTGCAAGGCAATTCACTGATTCCGCCATTAGGTTCAAAGCATGGATAGA
TCTTTCAGCAGACCCAAGCCGAGACTCTGCAAACTGCCTCGAGGCCTCCATGAAGAGGAC
GAAGTTGGCAGGCGAGATGTGTGCCCCTTCAAACATGATGTAAACCAGGGCTTCGAAACC
AGCGTCGGAAGCATCTGGATGATGAGCAGTGACACAGATTAAGGAAATGATAGTTTGCCA
ACCCATCTGAGACTTGATATGTGTTGCATTATCCTTGACAAGGCATGCGACCTTCTGGGT
GATACTCTCGCAATACGCATCAGCCACACGAGCATCAAGTTTCAAGATTAACTGAAGCGA
CCTCAGTAAGTCATCCACGAGATTCTCCTTATAAGGAAGCAAACGCTGGCAGATGTCCAG
GAGGCCAAAAACAGCTTTCTCCACCAGCTCACAGGGCATTACTGTGGACTGAACAATATG
AGTTATGTGCTCATAAACATCATGCCATAAGAGGACAATCCTGTCTCTGTTGTTTAATGT
GACGGCAACGAGAAGCTCTAAGCAGATGACTGCATTGCTATCAACATCTATTGAGCTGGT
GATCTTCTGAGGTTGCCCTGCTGCCTGAATGAGGGCTCTTGCCAGATTCAAGAGCGAGTC
AGCTTGTAAGAATTTGCTCTCAGTGAAGATGGTGCCTATTTGGCACTTCTTTATGGTCTC
TGAAGCATTCCTCTGAGCAGCAAGTTGCTCCTCTGTTGGCTGGAACCTTTGCTCTTCAGC
ATCTAAATACAGTAGCTGGGTGAACCTCCCCATCAGCCCAACTGTTTTCTTAGGAATGCT
GATTGGCTGAACTTGAGGGACAGTGGGAGATGAGGAGGAAACCTTGTTAGGCAATGAATC
AGAGAAGGACTCCTGATCACCAGCTGTGCTGTTGGTGAGACAAGAAGGAAGGAGACCTAT
CTTATGAAATCTTAAAATGCAATCTACAATTGTCCTCCATCCTCTGTTTATGTGATCACC
ATGAGTTGCTGCTATAGTGAAAAGGGCCTCTGTTGCAATTCTAGACTTGGCATCCTCACC
AAAAGCTGTTGCAGGATCATCACAGGCAATCGACAAAATGGTGAACTTGCCAAGTGCCAC
AACAAGATCATTCAGCACATCATTAAGATGATAGAATGCAGCCAACTTCGCCACTGACAG
AAACCCATCGATGCATCTTGTAAGAATTTCTTCTTGCTCAATATTGTCAAAGATCACCGA
GATAGCAGCAACTGTTGGCCTGACCATGATAAGAAACATGTCATGATCAAGAAAAGGGTG
GGAATGACAAGCAATGTAAGCTGATGCCCTCTTTGACTTAAACATCAGATCAGCCCAGCG
GCTGAAAGACATCTCTGAGCATCCAGCTCCTTGCTCGGGAATGGTTTTGATTTCATTTCG
ACAAATAGAATAATACAGCTCAGATAAGAATTCCCTTGGAAGATCATTCCCACCATTGAT
ATGGCGATTGTTCCTAATAAAATCTTCTTCTGACATCTTAATCTTGACCCGCACATTGTG
TTGGTCCGTGTTGAGCAAGATTACTGAGTACGACAGCACCAGAGCAGCATCCCGGTTAAC
GAACAATTCTGGTGACTCTTCATAGTACCTATCAGAAAAGGCCTCAAGAACCCTTTGTAT
CTTCTGTGATTCACCAGGCAGCCGAAAGGTTTCCAAGAAGAGCCTTAAGGCAGCATCCAG
GTTCAACTCCTTGAAGTCGAAGGTTCTAGAAAATTCATGAAGGACCTGAATGGAGAACTC
GTCATGATTCCCCAGATAGTCCCCAAGAAGATTCTTGTCTAATCCAGGCGAGTAGCGGAA
AAACAGGGCAACACTTTGTGGATCAAGTTTTTCAGGCAAGAGATGAGCAGCTTGCAGGTA
CTCAAAGCCCTTCCTTTTATCCATATTAAAATGTTCAACACCAACCATTAGCTTTCTCTT
GATGCTTTTCTGCTGGTTAGCAAATCTAACCCATTGATCAGGATCATTAATGTTCTCACA
CTTTAACTGCCAAAAGGAAAAATATTCACTTAATTCTTGCACTGGCTGCTGGCAGTGCTG
AGGTGAATTACCAATCCTCTCTGCTATTGCCTGAATGACAGCAACCAAACCATCCAAAGC
AAGCACATTCAAAGGTGACAAGGTGCTCTCCTCAGGGAATGCACTTTTGGACAGAACATT
AACCAGGTCTTCAAAAACATTAGAGCACTGTAAATCACAATCCATATTTGTATACATCTC
AACCATAAAATCTTTCTGCTGGCAAAAATCCACTAGAGTCTCCAGAGCAACTTCCTGCTG
CTGGTAACTAGCTCCATATCTACTCTGGGTTAGCCTAAGGATGACACATGCAAAGAAAGC
CTCAATTTGCAGCTTCAGTTCCCGACGTAAATGGTAGAAGAGTGTAAAGATAACATTGCA
TACGGTCAGACAGAATCAAGGGGCTATCTGACAGGCCAAACTGCATTAGATTGCGGAACA
GTTCATCTTGTACAAAAGCCAGTAGTTTTGGATGCCTCTGTATGGACGAAGCTGACAGCT
CAATAGCAGAACTGATCAACCCCAGAGCAAAGAGAGGCATATCCTCATCAAAGTCAATTG
GATTCATATTTGGGTCCACCTGATTGTCTTCCGCTATGTTCAACAGAGAGCACAAAAATT
GAAATATTTCTACCATGCAAGGAACCCCAAATAGCTCCATCATAGCCTTGTCTTGCACAA
CACCAAATTTAGCTCCAACCTCGTCCTGGGAGCTACTCAAGCACACAGAATCGCTCCCAT
TCCCCATTTCGCCAGCACTCGAAACTTCGTTCTTGCTACCAGCAATCTGCATAAAAACTA
CTATCATGAGCGTAATGCATTTTTAACTTTCTAATTGGTTTCTACTGGGACATGCTTTAG
CAAAACTGATGAATATTCTTAGTTGTTAGTGCCAAAATGCTTCTTTCTAAACAAACTTGA
TAAATACTTGATATTGCCTATAAAGGCCTGTAAAAACTGAACTCGATATTTTTAATTGAC
AAGGAATGGAAAACTGAACTGAAATTACAACACTAGACTCGGGTGTTTAGAGACTATCGC
CTATCGCACCTCGTGGTCTGCAACCGCGGTGGGATCAACGTCGGGCAGGCGGGCGAAGAC
GCACCGGACAACCTCCTGCATGGTCTGCCGGGACACGCGCTGCAGCAGCTCCCCCTTGGC
ACCGGCCTGCTGCACGACGCGGAAGCAGGTGCTGACGACGTCGCAGACGTGGCGGTTGGA
GAGCGCCGGAGCGGCGCGGCCGCGCACGCAGGCGAGCAGCACCTGCAGCGCCCTGGCCAG
GACGGCCTCCTCGGACGCCGCGTCGGTGACCTCGAAGCGGCACCCGGCGACGGCCTCCAC
GACGGCGGCCATGGCCCGGGCGGCGCCGGGCGCGTCGGGGCCGAAGGGGTCGAGGGAGAG
CAC