| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2549060
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37764 |
1 |
352 bp |
MLOC_37764.1 |
Available |
Available |
None |
| MLOC_37763 |
3 |
5393 bp |
MLOC_37763.1 |
Available |
Available |
LOC_Os01g62900.1, FRAME:+2, EVALUE:0.0, 13101.m06749 protein amino acid kinase, putative, expressed |
| MLOC_37765 |
1 |
2784 bp |
MLOC_37765.1 |
Available |
Available |
LOC_Os01g62910.1, FRAME:-1, EVALUE:0.0, 13101.m06750 protein CRR2, putative, expressed |
CDS Structure of MLOC_37764
CDS Structure of MLOC_37763
CDS Structure of MLOC_37765
Contig Sequence (9261 bp)
>contig_2549060 9261 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGCCGGGGGGGGGCCGCAGACGATCTAGGGCCGCCATCGCGCCGCACACGTAC
CCCGGACGCGACGGCCCGCTCGCTCCCCCCTCCCCCTTTAAATCGGGGGCGCCCGGTAGC
TCCACTTGGTATCCCACGGTTCTGTTCCGCCGCTTCCACCCACCTCCACCTTGACCTCGC
CTCGCCCACCCGTTCTCCCTCGCTCCCTCTTCTTTTTTTTGTCTCTCCCTTCCTCGCCTC
GCCCGTCTCGATCGGGAGCGAGCGAGCGAGCGAGAGCGGGTCGCCGCGCCGGGGGGAGAA
GCGGGAGCGGAGAATGGGCAGGGGTGGCATCGGGGGCGCCGTTGCGGCGGCGGACCTCGA
GAACAGCGACTCCACCCGCTGCTTCGTCAGGGACGTCAAGCGCATCGTCGTCAAGGTTGG
TGGTACTCCCATGCATGCATGGCCAGCTTTTCCTCCTCCTCCTCGATACGAATCTAATGC
CGCCGCCGCCGTTTTGTTGGGCCGGTTCGTTGGAACTGCTTTTGCTTTCCCCTTCTTCTC
CGGCGTGCGTGATCCTGGCCCGAGCGCGTCGGGGCTAGCACGGGTGATCGGGGAAAGCGT
CGGGGCTGGCACGGGCGAAAAGGTCCCGATCTGATGACGTCAGCGAGCTGATTTAGCAGA
GTATCTATCTATATTCAAACAAAGGCGGCGAAAATAGCTTCGATTCGCCGCACCTCATGT
TATTATGGCGTGGCATAAATATAAAAGATCACGTGCGAGGTTCTAGATTAACCCCGCTGG
TAAAAACGACGGAGGAGATCCCTGAAACTGAATTACGAAGTTATTTTTCATATATAGTAT
AGTTCGTTGCGAGGTAAAAAAATGTTTTTTTTACTTGGTCGCTAAGCAAATCGGTGTTAT
GTGTTCGTCGGGTTCATCCATCTAACCGCTTTCTCGTGCGAGCAGGTCGGCACCGCTGTT
GTCACCGGGCAGAATGGCCGACTCGCCATGGGCAGGCTCGGAGCTCTCTGCGAGCAGGTA
ACTCGACTTTTCTGACGAGCCATGTGCTTTTAACTCAACTTTTTTTACAGCGGTTTCAGC
TAAACCTGTAAAAAATTCTTTTTGCAGTTGCTAACCGGTGAATATGTGGAAATGTTTCAG
GTGAAGGAGCTTAATTTCCAGGGGTATGAGGTGATCCTGGTCACCTCCGGCGCCGTTGGC
GTCGGGAGGCAGAGGCTCAAGTACCGGAAGCTAATCAACAGCAGGTTGCAGAGAGTTTTT
GGTCACAGCAGTTTGCTGACGGCTATTAGCTCTGGTAATTTCGTCATTACCTTTGCTGAT
ATTTCTCCTTGCTTGCAGCTTTGCGGATCTGCAGAACCCACAGTTGGACCTGGACGGGAA
GGCCTGCGCTGCCGTCGGCCAGAGTGGCCTCATGGCTATCTACGATACGCTGTTTAGCCA
AGTGGGTTCTGCTAACTGCTCTTCTTTCTTTTGTTGTTGTTTGAGGTTAACGTGTTTCTG
ACAGCAGACTCACCTTCCTGCAGCTTGATGTGACATCGTCTCAGCTTCTTGTCACCGATC
GCGATTTCCGGGATCCAAGTTTTGGGCACCAGCTTCGTGAGACTGTCGTCTCTCTGTTAG
ATCTTAAAGTGATACCAGTGTTTAATGAGAACGATGCTATCAGTACGAGGAGAGCGCCAT
ACGAGGTGTGCTTTCTCTCAAAGAACAATTGACATGCACACCCAAGCTTCAGACTTTTTT
GTGTCTCTAATGTTATCTCTGGACCAGGAGCTTAATTCACAATATGTCTGTAGTCTAGGC
ATTCATTTTGCTTTTCATCTGCAGGCAACCTCTGTTATTATTTTGTACAACATCTGTCTT
GCTGAATTGGTCCACGTATGCAGCAGCTAGTTTATCTTTCCTTACTCTGTAAATAGAATA
TCTGAATATGTAGTGTCCTGTTTAGTTTCAGTGATCGGGATGTTCATCCGTCCAGGCTTT
GCAAAATGATGGCTATGCATCAACTTTATGAATATTCCCACTAGCAATGACTATTGGGGC
GCTTCCTGTTCACCGATTATAACATTTGACTCCGTGTGCAGGATTCATCCGGTATATTCT
GGGATAACGACAGTTTGGCGACGCTGTTGGCAAAAGAACTGGACGCTGATCTTCTTATCA
TGCTTAGTGATGTGGAGGGACTCTATAGTGGTCCACCGAGTGATCCTCAATCAAAGATTA
TCCACACGTACATCAATGAAAAACACGGGAAGCTAATTAATTTTGGGGAGAAGTCTCGCG
TGGGAAGGGGTGGAATGCAAGCTAAAGTGGCAGCTGCTGTTACTGCTGCATCCAAGGGCG
TACCTGCTGTCATTGCAAGGTGAGGCAACTTTTCTCCCTTGCTATTCTAGCATGATTTAG
CCATATGCATAGCTACTAAATGTTTCCATCAGGTTAACAATACTGCAAGCCATTTTATGG
TTGGTCACACTGCCAGCTACAGAGCTACTATACATGTGCAATCCGTGGTTACATATAAAA
CAATCGCGGTTTTAATTTGACACATCGGTAAATTACCTTGTATAATCCAATGGAGTCAGT
ACTATTACCAGCTTGTGTTGATATTTAGTTTAACTTCCTTAAGTATCGGAGAGAACTGGG
CGTCAACCAGTTGGCTAGCTAGAGCAGGCTGAAATGCTCGCAGCCCACGGACCCGCGTTC
GAGGCTCAGCCTCCGCTGTGTTGGTGCTCGCTTTTCTTCCTAAAACATGCCACCAAAGGC
TAGTTCTGGTTGGTCAAGTATTTTGAAGTATCGAATTTCACATCTTGAGAACGCTACCAG
ACATATTTAGTGTTTGATTAGATTACTTCACCGAAGATCCAGGGAGGCGTGTGCTTTCAT
TTTGGCATGTACTGAAGCTTGTGGTGCAGTTTTAGCTGCAACTGCCAGTTGTAGCCTTGT
GCATACTATTGTACAAAGCTGAGTTTATGTCAATCTGTAATATAATCATTTCTGCCTTCT
AACTTTTTTGTTCCTATAATCCATTCAGTGGATTTGTAACAGATAGCATTATTAAGATTA
TGCGAGGAGAGAAAATTGGTACGCTTTTCCATAATGAAGCAAATGTCTGGGATTGTACCA
AGGAAGTGACAACCCGTGAGATGGCAGTTGCTGCAAAAGATTGCTCGCGGCATCTCCAGG
TACCTTTTATACCTTTCTCTAGAAATAAGTAGCCATTGGAGGTATAAAGGTATACCTTCA
TTTCTTATAGTAATAACTATCAGTGGAAAGTTTGGGCTGCCTCGGTATTTTGGTTTTCGA
GCTGCCATTCCTAATTAATTCTGTTGCATGTGGCCACCCAAACAGAATTTGTCATCAGAG
GAGCGTAAGAAAATTTTGCTAGATATTGCTGATGCTCTGGAAGCAAATGTGGGTTTAATT
ATAGCTGAGAATGAGGCTGATCTAGCCGCGGCACAAGATGCAGGCTATGAGAAATCTTTG
GTTGCTAGGATGACCCTGAAGGCAGGAAAGGTGGGTTGTGTATGATTACGTTTGGCCATA
TCAGGAAGTCCTAGTATCTTCATCTCTGCAGTATAGATTTATATCTATTTGATTATGTTT
GCTCATACCATATGTTCTTATGTATTTGTAGATAACAAGCCTTGCTGAATCCATTCGTGC
AATTGCGGACATGGAGGATCCTATTTCACATACACTGAAAAAAACAGAGGTGAAAATGAC
ATACCGCATTTTAAAATTTGAAAGATATTTTTAGTGAATATGTTATACTAAGTTTTAAAT
TAAAATTTCCTCATTGTTAACCAATTAATGACATATTTTATAGGTTGCTAAGGATTTAGT
ATTTGAGAAGATGTACTGCCCATTGGGCGTTCTCCTAATTATTTTCGAGTCTCGTCCTGA
TGCCCTGGTCCAGGTAAATATTTTAGGTTCAAGTCATAAAAATTCCCTGCAAGATCAACC
TTATTTATGAGCATATTATTGTACAGATTGCAGCTCTAGCAATCCGAAGTGGAAATGGTC
TTCTTCTGAAAGGAGGAAAAGAAGCTATGAGATCAAACACAATATTGCATAAGGTATGAT
GCATTTAGTTAGCTGATTGTGTTTTTAGTACTGCATCATCGCTCTTTAGCTTAATTACAC
TTCTGACATATCTTTATTGTGTTTATTAGGTCATAACCAGCGTGATTCCAGATGGTGTTG
GTAAAAAGCTTATTGGCCTTGTAAAAAGCAAAGAAGAAATTGCTGATCTTCTAAAGGTGA
GCATGTCTTTCGATTCCTTGGATGATGAGAAGTTGAGTACATAAATATGTCTAAACTGGA
TGCACAATATGCAGCTTGACGATGTGATTGATCTTGTTATTCCGAGAGGCAGTAACAGGC
TCGTTTCTCAAATCAAAGCAACAACTAAGATTCCTGTTCTTGGTCATGCTGGTAAGCCAT
TTTTTAAGTTCATCCGTGAATGATATAATCATATTTCAGCTTATGTTATTCAAACATGAT
ATTTTATCATACAAACTTAAGTAGATTATATTTTCTTTGAAATTTACATATACGACAATT
AAAATTACATCCGTTCTTCTACAGATGGTATCTGCCATGTTTATATTGATAAATCGGCTG
ACATGGATATGGCAAAGCGTATTGTATTGGATGCAAAGGTGGATTATCCGGCAGCATGTA
ATGCTATGGTGCGTCTCTGCCTTTGTATTTGTGTATGATTTCAACTATTAGTTATAAATA
ACATATATTTTTTTAGAGATTTCCTATATCATTGTCATACATGTATTATTGCAACACAAC
GTGGATTCAAATTGAACTAACTAATTTATGTTCACACCAGATACACCATTTCTGACATGA
ATGATTAAATAAACTGACTAAGCATTATGTATATCATCTGTGCAGGAAACACTACTTGTT
CATAAAGATCTGAACAAGACAGAGGGTCTTGATGATTTGTTGATGGAACTCGCGAAAGAA
GGTATCAGCTCACCAGACCCTTGAAATCAAATATGCCAAAAATAATAACCAATTTTTTAG
TTATGTTTCATCAATAAATCTAGCAAACTTAGTTGCCAGAACAAATATGTATGCAGGTTC
TAGACACCTTGAATTGTGTTTTTTAGAAACTAGACACCTCGAATTGAAAAGTGAAGTTGA
TGCTAATGAGCATTTTTCAGACATGATCAGTTTAACATAATGTATTATCATATATTTATT
TTACCATGATCGTTTCGTTAATTTACAAGTTGATGTAATATTGCAGGAGTTGTTATTTAT
GGTGGACCTGTTGCACATGACACATTGAAAGTACCAAAGGTAGATTCATTTCATCATGAG
TATAGCTCAATGGCATGCACGCTCGAATTTGTTGATGATATACAGTCAGCAATTGACCAT
ATAAATCGTTATGGAAGGTATGCAGGTTTCCTTTTAAGCATGCTCTGCTGAATGTATCTT
TTTGTTACACTAAATTTGATTGTTGTCTCAAATATTTTTGTTTCAGTGCACACACAGATT
GTATTATCACAACCGATAAGAAGTCAGCAGATACTTTCCTACAACAAGTTGATAGGTATT
TAGTTAACTTCATTTCTCTGGTTATCGTGGTTACCAATTATGGTTATGTTAGCTTTATTT
CTTGATGTTTTATTTGATATACGATCACGCTGTAACTGTCGAAATAACATTTTGTCTAAA
CTGTGACAGTGCTGCTGTGTTCCATAATGCAAGCACAAGGTTCTGTGATGGGACTCGCTT
CGGTCTAGGTGCAGAGGTATTGCCTTTTGGCTCGCTTGGGTCTAATATATGCTGTCAAAT
GTTACTAAAGATTCAACTGGATCTGATGAAACAATCTTTTCTGAACATTTTCAAATGTCT
TGAATAGGTTGGCATAAGCACAGGGCGCATACATGCCCGTGGACCTGTTGGTGTCGACGG
TCTTCTAACCACTCGGTGGTAGGTCTTTACACCAGTCACTTTTTCTGCAATTCTTCAGCT
TACGCACGATATTTCCCGGTTTTATAGTATTAGTATATTCACTTAATATGCATGCATTGT
CTCATTATACAGCATTCTACGAGGGAGTGGACAAGTAGTGAACGGAGACAAGGGAGTTGT
GTACACCCACAAGGATCTTCCTTTGCAATGAGGGTAAGTCATGGTTGCTTCGATCGAATG
CTTAACTGGAAGTATTTATTTACTGACCTTCTCCTGTGGTTGCAGGTAGAGGATTCTTGC
TGTAGTTAAATCAATTTTTGTAGAATAATCCTCTTCAAAGCCCCCTTCTCTTTGCGCGAG
GAATGAAGAAAGACAGGAGAACGTTGTTACTGTGTCGCTATCTGGTTCCGTGATTGCCTT
CGGTTTGCTGTACAATGATTTATCCATACAATGTCGTAGTTATGGCACTGGCTGTTGTAA
CTGTAGAATTGCATCGGTACATCTATGCTATATATGTGAAGCAGCTGTACTGTTTCTGAT
GAAGTCTCAAATCCCTTTGTCATGTTGTCTTTGTATGGCATGGGTACGCAAAGAGCACCT
GAAATGAATGTGACTGGTATACGCCTTGATTGAAATGGCGCTTGACATCATGCGGATGAA
AACCGTGGCCTCGCAACTTGCACGCTGAGAGTTCTTGGATAAATGAGTGGATGCAGGGGT
GAACAGAACTAGCACCAGCTATGTCTCTGGCACCAGGCAGGTGTACTGCCACGAACTGTT
CCTGAGATTATGTGAGCAGAGGAACCGGAGAAATAGGCTGAAGTGATACAGGTCTTTGAG
TCGAACAGCTTTGTAGTCGTGACAGAGTTTTCCAAAACGAATAACTAGAATGCAATCTCT
AGAACTCTCAGAATGCAACAACCACCACTTACCAGAAACTAAACTTCTCAACATTTCTCA
TAATGCAATGACAACTCATTTATGCGTCAAATCACAGAACCATAAACCCCTGATCATAAG
TTACCGTTGCTTCCATATCTTAAACGAATCTCAGGTCTTGATTATGAAGATTAAGAGTGG
GATTTTACAAGGAACTTGCTAATTCAGAATGTGCCAAGGACACCATTACTGCCAAGGAAA
ATGTCATTAAATGGACCCATTACAAACGTGTCAAAATTGCCTTGCAGAAGTTCCACTGGT
CTCCAAGTAAAGACCGGCAATCAAATTTTTTTCCTCCTGAAAGACTGGGTCATCATGGCT
AAATCTAATCATGTTAGGCTGTACAATAGTTCCTACTTCATGGTCATTCGGTATGATATG
ATCAGCAAAGATCAAAAAACAGCACAGAGTTGGCAGCATCTTCACCAATAATCGCCACAC
GAACAGATTCCATCCCTGAAGTGGTGAAACCGATTCACATCCTTCACAACGATTTCGCGC
TCTGTGAATTTGGAGATGAACTTGGTGACTGAATGACAGTCCTCACATAGCCTCAGGTTC
TTGGTGATCCTGATTACTTCACCGCCGCGAGTGTTGATAAGCCCAAATGCAACTGCTAGC
TTCTCACTATGACCAAGCAAGATCCTTTCCTTTTCTTCTTCTTCAATGTCATACATAACA
ATATCTGTGTCAGGGACATAGCCCTGATTTTTCATCTGTGCCACAAACTCGCCTATCAGA
GCTTGAAGCTGCTCGACCGGTGGGTTCTTGTTGTCCACAGATGTGAAAGAGTGTATCTTT
TTGTTCACCTCCATCCAGCTGCACCCCGGCACCTTCTCCAGCCCATGCTCCTCAAGCAGC
TCCTTCAGAACGTCAACTTGGTCGTTCAATTTAGCCCGGGAATAAATATCAGCAAGTAAT
ACATAGTTCCCGGCATTTCTGGGTTCAAGATCAAAGAGACGAGAGCAAGCCATCTCTGCA
TACTCCACATGGCCATGAATACGGCAAGCTCCAAGAAGTGCACCCCATACTTGAGGACTC
GGCTCAATGTGCATGCTCTGTATGAGCTCCACAGCTTCATCCAACTGCCCAGCACGACCA
AGGAGGTCTACCATGCAAGCATAGTGCTCTGCACGTGGTTTGACACTATAATCCATCATC
GACTCAAACAACTTCTTCCCCTCATCCACAAGTCCGGCATGGCTACAAGCCCCAAGAACA
CTGATAAACGTGATGATACTTGGCGATAACCCAACTTGAACCATTTCCTCAAACACCTGA
ACCGCCTCACGGCCAAAGCCATGCACCCCATATCCAGATATAAGTGAATTCCATGACACC
ACATCCCTCCGGCGTCCTATCCAGTTGAAGATACGCCGGCCAACTTCAAGGCATCCACAT
CTCATGTACATTGCCATCAACGCGTTCAGCACAGAAACAAGTGAGTCGAAACCCCTCCGA
AGAATATATGCATGCAATAGTTTGCCATGACTGAGTGCGTTTACTCCCGCGCACGCATTC
AAGACGCTTACTATTGTGATCGAGTTAGGCACCAGGTCTGCATCAGAAGCCAGCATATCC
TTGAACAGCTCAATGGCATCAGCAGGTCTCTCATTCTTGGCATAGCACCCAATCATGGCA
CTCCAGGAAACAACGTTCCTCTCTGGCATTGCAGCAAACACATTCTCAGCATAGCTGACG
ATCCCAAGCTTTGCATAGCAGTCAATAAGAGTAGTGGCGACATGCATGTGCAATGCGTAG
CCACGGCGGATGGCATGTGCGTGTACCTCGCGTACACGTGCGGAGGCCGGCGCGTGCGAC
GCCGACACGGCGATGCAGGCCTTGAGCCCGTGCGTGTAGCTGTAGCTGTCGACGGGAACG
CGGAGCCGCCCCATGTCGGCCAGGCGCGCGAGCGCCTCGTCGCCATGGTCGGCGAGGGTG
AGGGCCTTGAGCAGCGCGTTCCACACGAAGATGTTCTTGTCGGGCGCCTCGTCGAACACC
TGGCGCGCGGCCGGGAGCGCGCCGAGCGCGGCGTAGGCGTCGATGAGGCGGGTGGAGAGG
AAGGGGTCGGAGCGGAAGACCGGGTCGGACTCGAGGCGGCGGTGGACGGCCGCGGCGAGC
GCGGCGTCCCCGGCCCTGGCGGCGGCTTGGAGGAGCGACTCGTAGGTGCGCTGCGTGGGC
GCGGGGAGGCCCGGGAGGAGCGCGGCGGCGCGGGAGAGGCTGCCGCTGGCGCAGAGCGTC
TGGATGAGGTGGTTCGCGTTGGCCGCTGGCGGGGGGCCCGCGCCCGACGACGACGGCCGG
GAGGGGCGGCAGGCGGCGCGCGGCGGGGGCCGTTCGGATCGCGGCGGCGCGGGGGGGCGG
GCGCGGCGCGGGGGGGCGGGG
