morexGenes - Barley RNA-seq Database

Contig contig_2549050

Source Contig contig_2549050

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2549050 (1891 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2549050

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_37760	1	1012 bp	AK367837	Available	Available	None

CDS Structure of MLOC_37760

Contig Sequence (1891 bp)

>contig_2549050 1891 assembly3_WGSMorex_rbca.fasta
TGTTGTTCCCCCTCATGCCTCCCCCCACTCTCCTCCTCCTTTGCCTCTCCTCTAGCCTCA
AGACACCACCACTAGCCCAGCCGAGCTCGCTGGCATCAAGAACTTCCACTCACCGCCATT
CTCACCTTGAAGCCACGTCACCTAACAATGAACTCACCATTAAGGCCATCCGAGACGATT
ATCCACACTGCGTAAGGGGGGTGATGGACACAAAGAATGTGTCTATGTGTCCACTTCTTC
TCTCGGGATAAAAACCACAACTTTGTCATAGTTCTTCCTCAACTTTAGTAAGTATTACTT
GCACCCGATCTCCCATTTCGTAACATCCACCTCAATTCCTTCTGCATATGAGTATCCTAG
TCATCCTATTTGATGCCCCCAAGTCAACTTTTAGATTCCATCATTGTAACACTGCCACCA
CTTTAATCACCACTGTTGTCGTCTCTCCATGCCACCGCCATCAACAGAGCCTCCTCCCGA
TCGCATCTTTGGCATTAACTGAACGACCTTGTCCTTTTTTCGTCAAAAATCATACAACCT
TGCTTTCTATCATTCTATGAAAGAATGAAGAGATATTGGTTTCTCCCCTACTGATTGATT
GAGCCCAAGACTGCTTGACGACTTTCGGCCCAAGCTATTCCAATGTTGAGTCGTGTTCCT
TATCTACATGTGTGTTGTATTCGTCATTTTGATCTTCGTTTGGTTCGGTACAGCCGATTC
GGGCTGGTGTAGAAGGAACGGGACAAAATGGTACTCCTCTGTAAAGATCTAAACGTTCAT
ATATTTCTTTACAGATGAAGTAATTTTTATTATTCTGTTTTGTTCAATTTTCGATATATT
ATGCCGTCCTTGTTTAATGGATGAAGTTTGTTCATTAGAAACATAGAATCACACAAACAT
TCTTGTTTATCTTAAATTATGACCACTAGTAGATAGCACGCAAGTAGATACAACACGTGC
GCGGAGGCACGGGGATAAACCAAAGCAATCTACTCTCGCTCTCGCTCGCTCGTACGGCTA
AGCCAATCACGTGATTATCAAATCACTTACTACTAACACAGACATCAATATTACGCACGC
TTACGTTACACCAGGCAGCAGCAACGGCTACAAACAAACAGGGCCCTCCTCGAGGCATGG
AGTCGGACGGAATCAGGAGGCGGCGGCGGCGCGTCGTGCGGGACGACGATGGGCTCAGGA
GGAGGTGGCGACGCGCGGCTCCCAAATGAAGAGCTGCCCGCTCAGCTGGCCGCACCGGCG
CATGTGGTTGAGGAGCTCCTGCTTGCTCCGCCGCCTCCTCGTCGTCATCAGCACCTTGCC
CTCGCAGGGCGTGGCAGCAGTGCCGTCGTCATCTTCCGGCAGTGTCGCAGTCGCGCTTAG
GGCCGGAGCTGCGGCCAAGGCAGCGGCTGCCGAACTGCTCGCAGGCTTGGGTGGCTGCTG
CGGCGGCACAGCAGCGGCGTCATTGATCTCGGAGGCGTTGACGGGCTCGGCGCCGACGAA
CTTGTTGATGACGAGCGAGGAGCGGTGCACCCGCGCTCCACTGCTGTGCGCCTGGGGCTG
CGTGCTGACCTTGACCTCGACGATGGTGCCTCTGTCCACGACCTGGACCTCCTCCCCCTC
CTCCTCCTCCTCCTCCTCCTCGTGGGTTCGCTCGTCGGCCTGCTGCTGATCGGTCTCCTG
GGCGTGGTTCTTCCCCTCGTCCTCGGCGGGGGCGGCGGTGTCGGCGAAGGAGAGGAGCAG
GCGCCCGCCACGGCGCTGCGCGCGGAACAGGGTGTTGGACAGCACGGGGACGGCCTCGAC
GACCAGGCGGCCGTCGCGGCGGTGCTGCCTCATCTGCAGCGACCCCACAGTGCGGGGGGC
CCGGGGCGGGCAGCGGGCAGAACGACGACAG