| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_2548992
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37741 |
2 |
1876 bp |
MLOC_37741.1 |
Available |
Available |
LOC_Os03g49580.1, FRAME:-2, EVALUE:0.0, 13103.m05377 protein eukaryotic peptide chain release factor subunit 1-1, putative, expressed |
| MLOC_37740 |
4 |
1571 bp |
MLOC_37740.3 |
Available |
Available |
LOC_Os03g49600.1, FRAME:+3, EVALUE:0.0, 13103.m05379 protein Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed |
CDS Structure of MLOC_37741
CDS Structure of MLOC_37740
Contig Sequence (8169 bp)
>contig_2548992 8169 assembly3_WGSMorex_rbca.fasta
GCGGCCGCGGGCCCTCCATCTGGGACGCGTTCGCCCACGTCCCAGGTCATCCCCTCCTCT
CCTCTCCTCTCCTCTCCTCCGTCTCTTGCTTTGCTCAGCACCAGCAGACTTACCACTCAC
CATTACCAGTGGCCAACGAGCTGCTTACTACATCTGCCAATGGCGAAATGTTTGAGAACG
ATTGATTATGTCTCGATTGATGGTACTGCAGCTAATTGTTTGCAGATGATAGATCCGCGA
CTAAACACTCGAATTAGAATTTTGAACTGAGATCCAAAGTGCATTCGTCATCTTCTTCGA
CCTCATCCATCCACACTCACAATTTTCTTGTTTGTGTTGCAATGAGCAGGAAACATTGCG
GGCAACCAAAATGCGGACGTTACTACGGATCAATACCATCGATACAAGGTACTGCCACCA
CACCCGAAGCAACAAAAAAAAACGACAAGGGGAATATATTAATATACATCCAAACTTCCA
GAGCAAATAGAGGCGCATCTCATAGTATTAGAAATCATAAATAACATCCATGCTAGAAAT
TAGCTGAAAATGTCACTTTTATTGCTCCTCTGGGTTCTTTATAGCACCGCGCAAACAGAG
GCGCATCTTCTAGTATTAGAAATCATAATAATTTCCATCTCCATAGAAGCTAATGGGTGG
CAATGTTCGTCTTCGTTTGGTCAGTCAAGTGATGGCTGACCAATGCCAGCTTTCTATCTA
CAAGTGAAATATCTGTACGCGTTTCGAAATTACGCCGCATAGATCACAGTTCACAAAAAT
TGAGCTGATTGACATATCCCAGTGCGGTACTAATTGTAAACACTATATATGCATAGCTTT
ATTCTGGGGGAAACATTAATATTCACCCTACGACTAACTGTCCAGAAAGAACTCCAGGGC
CTTAAGATATGTTCTTTTATGTTTGGACAGGAAGATGTTAACCTCATGAAAGGATTGAAT
TTCGATGCCTACCGGTTTTCTATCTCATGGTCCAGAATCTTCCCAGGTAATTCAGAAATT
TGGCTGGACGTAGCATGCTAATACATAACTTCAGTATTGTTCTGACTGAAACACAAGAGT
TACCACCCTTATTCATCTTTGACTTGTGCAGATGGTGACGGAAAAGTTAACCAAGAAGGT
GTCGCGTATTACAATAATCTGATAAACTACCTTCTTCAGAAAGGTATAGCATATGACTAA
GCACCTTTTTTTTTTTTTGCGCACGGAACTAAGCATCTATTTCAACCTGTGAAACTTCCA
TGGGAACCAGAATGCATTAATATCTGAATGTTTCCATGAAAACTGAGCAGGCATTACTCC
TTACATCAATCTTTACCACTACGATCTCCCTCTTGCACTTGAGAAGAAGTATGGAGGCTG
GTTAAATGCAAAGACGGTGTAAGTCAAACTAATATTCTATCCATCTATGTACTCATGTGT
TACATGTACCTTCTCCCTTTGGAGTTACTGTATACTTGTAGATTGGAATTAGATGCTAGC
ACATATACGTGAGAACGCTAAAATGGTTTAGACAAATTACCAGTTACTCTGTACAGTAAA
TTATCTATTAAAAGTGACTTTGCGCATTGAGACATGAGCATTATGCATGTGGAAGTTTTT
GTATGTTTGCCCAAAAGTAAAATGCACAACATACAGGCGCTATATGTTTTTCTAGGTAAA
TACAGCATGCATGACCATCTTCGTAACATTTGTTTTGTAGGGGACTATTTGCAGACTATG
CTGACTTTTGTTTTAAGACCTTTGGCGATCGTGTAAAGCACTGGTTTACATTCAATGAAC
CAAGGATAGTTGCGCTTCTTGGTTACGACGTAGGGTCGAATCCTCCTCAAAGGTGCAGCA
AATGCACTGCCGGTGGGAACTCAGCAACAGAACCTTACATTGTTGCTCACAATTTTCTCT
TAGCACACGGTTATGCAGTTGCAAGATACCGGACCAAGTATCAGGTATTTTCCTACTTTA
ATACAGTATAAGAGTTAATTCTAATATGATCAACCTTCAGGAATGTAGTTTGAATCAGTT
TTCTCTTGAAAAGTTAAGTGTGACAGGCAGGGCCAATGTGCATTAACTGTGGAACAATGC
CCCCCGACATGATTTTACTTTTATTATTGTGTATATATCCATGAATGTATTAGTATTATT
TTCCAAACCCCATTGAGCATGTAAGTGACAACAAATCTTGAGATATCAAATAAGTTGTGA
TTTGTCGTGGGCATCAATCTGTCTAGACTGATGATAGAATAGTATCTGAATAATTTAAAA
AAATGCAGGCAGCTCAGAAGGGGAAGGTTGGTATAGTTCTGGATTTCAACTGGTACGAGG
CTCTTACCAACTCAACTGAAGACCAAGCAGCAGCTCAAAGAGCCAGGGACTTCCATGTTG
GCTGGTAAGGCCTTACTAGTATCCTCTGCAGAGCATTTTAAATAGATAAACAAAAAAATA
TCAATGCTTATACCATCAACGTTGCATCGGATGCAGGTTTGTCGACCCGCTGATAAACGG
GCATTACCCACAGATAATGCAAGACCTTGTGAAAGAGAGGTTGCCCAAGTTCACTCCTGC
TGAAGCTAAAATGGTCATGGGCTCCGCGGACTATATTGGGATCAATCAGTACACAGCTAG
CCTCATGAAGGGCCAGAAATTGCTGCAGCAGACGCCGACCAGCTATTCAGCCGATTGGCA
GGTTACCTATGCCTGTGAGTTTCTTGTCTCAAGCTCTAGGTTTTGCATCACTACATTTCA
ATGAATATTGTCGGCTCATCCTTCAATTATCGCCGATATTTTGCAGTTGAGAGAAATGGC
AAGCCGATTGGACCAAAGGTATGCAGTGGTAGCTCTTAGCTGCAATCCTTTTCAGCTTTA
TTTTCTCCCACAATATCTAATCTAACTGTTGAGTTCAAAATTAACATTGCCAATGCATGA
ATTCGTCACAGGCGAATTCGAACTGGCTCTACATCGTCCCATCGGGGATGTATGGGTGCG
TGCACTACCTCAGCCAGAAGTACGGGAACCCGCCGATCGTCATAACTGAAAACGGTACTG
GATAGTGGATACACAGCTCCATGTCTCTCTTTGCTCGGTTTCATGCCGCCTTTCGATCAT
CCTGTCATACTAACCTTAGCATCATCATCATCATCATGTGGAACTGCCAGGAATGGATCA
GCCGGGGGGGCTCACGCGCGACCAGTACCTGCGGGACACGACGAGGGTCCGGTTCTACCG
GAGCTACCTCAGCGAGCTGAAGAAGGCCATCGACGGTGGCGCCAACGTTCTCGGCTACTT
CGCGTGGTCTCTCCTCGACAACTTTGAGTGGATGTCCGGCTACTCGTCCAAGTTCGGCAT
CGTCTACGTCGACTTCAACAGCCCCAACCTGGATCGGCACCCCAAGGCGTCGGCCTACTG
GTTCAGAGACCTTCTGCGACACTGAATATGGATGGAGCACCTCTGAATCAACCAACCTGA
TGCTGTCATCATCATCATGATCATGATCTTGCTGAGTTTCTGCCTACTGTTGTTCGAATG
GAACCATGATTCAGACTTCAGAGATACCAATTGGAATTGGAAATAATAAAAAGATGGCAC
GATGTTTGAGTCCTGCATTATTTCATGTTTCTTTTCTCTGCCAAAATGAGCAAATTTAGC
CAGGTGAAAACACACCCCAAAATTAGCATAGAGGGGGGGAAAACGAGCTCATTCGCCTCT
GTGCGCTGCCTAAGTTTGCCTTCCTCCGCTGTGGCCTCCCTCCCTCAGCCCAAGGAAAGA
TCACGGCGAAACATGCATGAGCGAGGCCTTGCATGCCAGCCTCCACCGCACGCGTACGCC
ACCGCCGCCGCAGCATCGTTGTTGTCATGGCCGCGGGGCCGGTGAAGATGGTCGTCCTCG
CCGTCCTGATCGCCGCGGTGGTGGCGATCAGCTACTTCTTCCGGTACAGGTGCCCGCACC
TGGCGTCGCCGTTCCTGCCGGGCGCGGCGCCGAAGCTGGTGATCGTGGTGATCAACGAGC
AGCAGGTGGGCGAGGAGCTGGACCTGGCGGACGGCAACGTGCAGCTGCTGTGCCACGGCT
ACAGCGAGCACAACCTGAGCCAAGCCGTGTGGTCGACGCGGGCGGAGATCCCCAGCGCGG
CGGCGGCGCGCATGTCGCTGCCGGCGGTGCGCGGCGACGAGGTGTTCGAGGTGCTCTGCT
CCTACCGCGGCGCCAACCGGTGCTGGGCGCACGGCGTGCGCATCTTCTGGAACCCCGGCC
ACGACCTGCTCATGTGCAGGGAGGACGGCGGCGGGTGCAAGGTCAGGTTCAGGGAGGACG
GCGGCGTCGAGAAGCAGTACGGGGTCATGGGCACCAAGCTCGGGATGGAGACGCAGCCGC
CGCTGTTCCTCGGCTTCGCGCCGGACTTCGACAACGCCAGGGACGGCGCCTGCGCCTCCT
CCAGCTGCGTCGGCAGGACCGTCAACAGGGTCATCGGCGAGGAGAGCTGCTGCGACGACT
CCTGCGGCGGCTGGGAGAAGGCCAACCCAAGGAAGTAGTCCTCATGATCGATCCTCCATT
GTAGAGTACCTTCATGGTTTTTCTTTGTCTTCCCTGTATGTATGTATGATGTTGATGGTG
TAGAGTACCAGATGATTCCAGTATGGTGTAGACTATGCAATGAGATACTGATTAATAGGA
GAACATACACACACTTAAATGACAAGAAATAAGCATAAGGTTCCTCTTCCCACCGCCGAT
CCGCCTCGGCTCCGATGGCCCTAGGACGGCCATGAAGCCGTGGTGAGCCCACGATGGCTC
TCTGAAGATGGAATAAGATTTTTCCCGCTTAGTTCATATCCCCGCAATGCGTTAGCGCTG
TTGGAAGGCATGTCTACAACAGATCTCACGAGGCAATGTGTTAGCGTTGTCGGAAGGCAT
GTCTACAACAGATCTCACGAGATTCAATTCATGTCGATCTTCTATGAGGGAGAGGATGGA
TCTGAATCCGATGAGGGAGAGGCGAATGTCAGCGTGCCCTTCCGCTCATTTCAGTGTTTG
CAGTCTTCCCTAGTGGGCCTGGATATACTTTTTGTTGCTTTTGATGCACTTTGCATTGGC
ATGACAGATGATGAATATATCATAAGTTTTTCTGAAAAAAACAAAGACACACTTGAATGA
ATCCCAATCCAATTCAAACTTTCCCGCATGACAACAATAATAAGTACCTTACAACAACTC
AAATTTAGGGCAGACATTTGCCATGTTCCACCATTAGGGAAGACAAGTTGCTAATTCGAA
CCTTAGACACAGAGTCAGTTCAGACAACGGCAGACAAGGAGTTCCCGGGGAAAAAAGATT
GGCAAAATAAGAGGCAACAAAAGGTTCGGTACACGGTTATCATTGCGATTTAGGATAACA
TCTCGACATCTTTTGATAGAGGAATTGTGGCTGTATCGTCTCAGACTTCTAAAGCATGGT
ATGAAGCTGACCCGAGCGCATCAGTCACTGGATCTGAAAATAGAACATGAGAGCTTCAGA
AATCATATAACTGACAATGGAATTACAAGCTAATTGCATGGGAGACAAAACTCACAGCTT
CTTTGAGGTGCCCCGGAACAAATAGTCGCGCAAAATTCAGATTTAACCGCGACTGCTTCA
GGCATGTGATTGATTGGTTGCTAGTCAGAATCTTCATAGACACCCTCATCGTCATCAAGA
TCATCAAAGGAACGAATGTCCAGCTGATAGCGCAGGATACCACCAATGCCACCAAACCCT
CTACAGAACTGTGATCCCTCCTGAGATTTATTGGTAACAAATTCAAGGGTGCACCCAAAC
TTCTTGTATTCATTAGCGAACCATTCCAAAAGTGAGGTCTTCTCCTGGACTTCTAACTCA
GCGTTGGTGGATGGATCACGGAAGTTGCTCTGGTCGGTTTCAGTTTCTTTGTTCAGATGC
TTTATGATAATTTCTCCAGTTGCACTGTGCTTAAGCACATACCGATTGACATCAAGGTTT
TCCCACACCATCAAAGTTTCAACAGCACCCATTTCAAGAGCCTTCAGGGTGTCATCAACA
CCAAAGACATACTTCCCAGTATCTTGACTAATCTCTTCAAAGTACTTCCCGATCAACTTC
TTCTCTTGTATGAACTTCACATTTGCTAGAATTTCAGCTGATAACTCAATGGCTTGATTG
AAACCGCTCTCACCACCATACGAAACATCAACCACATTAAGTATTTTGGTCTGAAGGCGC
TGATCAAACATGTCAGACTGGCTGAGTTCTGTTTTAAAATCAGCAGAACCAGCCAATATT
AGTCCCGCAACATTAGGCTGGCTGGTAGCTTGGTTGATGAAGAACTGGGTAGCAAGTTCA
GCTGTTTTCCGGACATAATTGTGACGCTTCTCCATCCGAAGGCGAGCAAAACGCAGAGCA
GATTGCCCTCCTCTTCCATGCTTCTTCGGGAGATCCACAGTGAATTTGTGAAGCACTTCA
CGAGTATTGCCGCTGAGTGTGCCAAAAAGAGTACCATTACCATCCATGATAATGAAACCA
AACTTGTCATCGGATTCCAGGAGCTCACTCAAGGCTTCAGTGTGGAACTTGTTGTCACAA
AGGTACAAGGACGCATTGATGGGCTTGAATGGCTCAAAATCGATTGTAACCTTCTTTTCC
TTGCCATCATCAGTAACAATTGTTCCAGTGTAAAGAACTAATCCATTTGGGGGAACCCTG
TTATACAGCTTCAGCCTCTGCTGAGCTGAGGTGATGGCTCCCAAGACAGATTGACGATTG
ACTCTACTCTTTATGTTTGAAGCAGTACCATATTCATCACCCAACATCTTGGTCACACGC
GAGACTTGATCACGTGGAGGCATGATCAGAGAGATCATGCTTGTGCCATTGCCTCTAGCA
GACTCAAGTCCCTTGATCAGCTTCTTAATCTTCCACATCTCAATATTCTTGTCGGTTTCA
TGACTGTCAGACATCTTGACAAAAGTTGGGTGCTCAGTTCACCTGGAGAACACAGAGGCT
ACCAAGTGTAAGAAACGAGCAGAGTGGTGACAAGTGATGGGAGCCTAAGATACTGCTGCA
AGGAAATTAACTTTAGATTTTGGGTGGAAAAAAGAGCGATGCATCCAATGCAATACAGCA
ACATATGTTAACCTATTCCAGTAGCTGCACAATCATTTTACTTAAATACTTAAGAACTAC
ATCAAACATGTGATCTACGTTAAATGAAAAAAATGGCAGCCAGCAAAGTGGATAACCGCA
TAAGCTCTACAATTTAAATATTTAATAGCCAATGCCAGCAACGGTAAAAATACCATATAT
GAGCTGACCGATTCGTAAATAACTCGGGAAACACATGATATCCTTTCCAAACAAAAAAAA
CAAAGGAAGCTCTGCATATATATCAAGCGAGAAATGTTACAGCCTCACAAAAAGCAGGAA
GTGTGTGGACTTCAATCAAGGTCCTCACATTGATTCTCAACATTCACCACTTGGCAATCA
CATGTAACCCGCCATGTAATGTTCGGCTTCGAAAAACATCCAAAAGCCCAAGAACCAGAA
GATCTAGAATTGCAGGCAACTTCTTACTACACAGCACTAACGAATAGCAGCACTAACGAA
TAGCGCGTGCTCAAAAGTAGAAAATACGATAGACCAAGCCTCCAGCATGGAGCTGTACCA
CTGTGAGTGCGTGTTGATCTAAAAGTGGTGCTTCTCATCGAACATAGCCTCAAATCTAGC
ATCCGAGAAAAATAATACATAAAACGATGTAAAATAGGACCCGATGAGGCACAACCGGAT
GAGAACATGCGTATACCAGGGTAAATAGCGGCACGAGGCGACGGGCGCCACCAATCCGCA
TCGGCGGAAACGCAAAAAAAACGAAAAACCCTAATAAGCAACCAACCCGACCAGATCTCT
AAGCCTATATGGTAGAGCTAAGAACAACGCCGCAGCCAAACGGAAACCTGGCCGGAACTA
AGCCCAAACGCGGACGCAGGGGCGGATCTAGGGTTCTAGGCGGCGTGGCGGCGCGGGCGT
TCGCTTTTGGGTTCGGGTGGCCCGTGGATGACTGGACGGCATACCTCAAAAGCCGATGAC
GGAGACTGCGGACGGGGATGGAGGCGACGAGGTGGAACGACGACGGCGACGGCGGCGGGG
GGGGGCGGG
