Map Locations of contig_2548987 (4150 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548987

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37738 1 1284 bp AK360340 Available Available None
MLOC_37739 1 730 bp AK370387 Available Available None





CDS Structure of MLOC_37738






CDS Structure of MLOC_37739






Contig Sequence (4150 bp)

>contig_2548987 4150 assembly3_WGSMorex_rbca.fasta
GCTGAAGCAGGGGACGTCAGGTTCATCGTGTTGGTGCTATGTGCAATCCTCTGCGGCTAT
GTTTATCAGGTAAAATCTTGTGCCCTTCTTCCTGGAACATTTGTGCTTCTTTATGTTGTG
TAATCTGTATCATGATACAATATATTTGCCTTTTGGTGATAAACCTTGGGTTCTCATATC
TAAAACGACTGGTGCATTTTAGTACTTAGCCGCATTTCACTTACTTTCTGTATTTCAGCT
AATCTGGCAGAATGAAGTTGTGCTTTAATGTTTATATCACATTCTCTTTAATGTCTATCA
TGTGCATTTTCACAGTGCCCGCCGTTCCGATTGAGTTATCGTGGCCTAGGCGAACCATTG
TGTTTTGCTGCATTTGGCCCATTGGCTACATCAGCTTTCTACTTCTCAAACAGCAGCAGA
AGCATTTCAAGGTACACCCTAGAACAACCAGTTGTCTAGTTATCAACTATTGTGTGTATA
ATCAGCACTTTAGAGTGTTGAAGGACGATGTTCTATCTTAATTTCTCTACAAATATGTTT
GAAATGTTGGAATTTGTCAGCGGGACTGCGCTTCTCCCTATCACCAAAACAGTCATAGCT
TCATCGATTCTTGTCGGGTTGACAACCACACTGATACTCTTCTGCAGCCACTTTCACCAG
GTATAAGAAACTCAACCCCCCTGACATATACGATTGACGCAATATTTTTATATCTGTGAA
AGGATCATTAGCTGACGAACTCCCTCACAATCTGTAGATCGACGGAGACAGGGCTGTCGG
AAAGATGTCTCCCCTGGTATTCCACTCTCTGTTTTTTCAGCACATCTGATTTCACTCATG
TACAAATAATCAGCACTACGTATAACACAAGTTTTTTGCGTGTGAATCTGCAAACAGGTA
AGAATCGGCACCAAAACAGGCTCGACAGTAGTAACGCTTGCGATCGGCGCCCTCTACGCT
CTCTTGGCGGCTTTCGGCATAAGCAGATGCCTCCCGCCATCCTGCATTGTAAGCTACTGA
TTCATCATGCTGTTCCTCTTAAGAAAATTATCACAAAACACAGTTCTCACCTCAGGTGCC
ATTGCTGCCGTATCACAGGTCCTTGGCGCCCTGACTCTCCCTCTGGGCAAATGGGTCGTG
GACTACGTGCAGAGAAACCATGATGTAAGTAATCCTCCCTTCTCACCCCCTCCCTTTTTC
CTTCTGATTTTTTTGCACATTAACACTGGCTGGGGTTGGATAAAAATGCAGGATGACGCC
AAGATCTTCATGGCCAAGTATTACTGCGTGCGGCTGCACGCCGTGCTCGGGATGGCGCTG
GCTTCCGGCCTGGCGCTGGCCAGGAACGGCATGCTTGCCTGACAGACAGACATACACACG
GGCCACCATTGACAGTCTTGACACTCTGGAGGCAACAGATATCAGAGAAACGCTTCCTTC
TTATTGCAGTTTAACAAATGGAATAAAGAAAACACAGACAGACACAGACACAGACACATC
TTTCACAGCTACTCTACTCCAGTAGAAATTCAATGGCAGTTGTCTAGCCGGAGGCGTCCG
GATTGGGCAAGCAGAGGTTCAGAGGCAGGCTCACAGCAGCAGGCTCTAGCTTGTACGTAC
ATACCACCAGTACAGTATCCCGTGATCATCTAGGTAGACTCTTTTCTCCATGCAAAGGGA
GAGGTAGCTTGGCGTGCGCGTCCGTCCTCGCAGCTACTGCTAGGGTAGATCGCCGTTTGC
TTGGCCTCCAGCAGCATATGAATTGAATTGAATTCTGATGAGGCAGGACGGGACAAGTCA
GTCACAACATGCTCCGGCCCTCTCCTCTCCTCTACCGACGGACGGACTGCCATTACTACA
TTATTATTACTTCCCCTCTTTACCAACCGGCGGTGGCAGAGAGTGGTGGTAGCCCAGCTG
CTCCTGGTACGGCGCGCAGGCCAACTTGTGTGCTGCCTTTCCCACCTTGCCATCTACTCC
TATGTTTGTACTGTATCATTGGCTCCCGGATCTTCAAATCGCAGGCCTTGCAGTAGTATC
TAGTATTACTGCTACTGATAATGCTGCTGTATGTTCATCTCACTGCCCAAATCAAAGTGA
GAATCACGGATTCATCATGTAACTAAACCAAACAACATGGTTGCTGGTACTGGTATAAGC
CTAAATAACCAAGATTACCACACCAGGAGCTGACTGGTGGTGAACATATATACACGCACG
AGGTAGTAGAGGAAAATGGTGAAAATGACGGCCAGACCACCACGCCGGCATCCATCGTTC
CTTCTCAACACACCACTTTCTGACTGGTCTTGCGGTACCAGTGATTATCCCCTCCTCCAA
AGCCAGCCCACCACAGAAACGGGCATCTGTGCTTCTCAATTCCTCCTTTTCAAATCAGAT
CCTTAATTCCTAAGTTGAGAATATCTCGCCACCCGTTTGAATATGTTCCTCCTCCACGGT
CCACATCCACCAAGAAACCTAAGAAGCACATCTTTCTGTTACAATGTCGACAGCCCTGAT
GAGGTCAAAGAATGAAGAAAATGAAATGTCGACAGCCCTGATACTTCTGTGCTAATTCGC
TGCAAGTCATTTTTTTTCTGAAAGTGAGAGTGACAAGAGGTGAAGAACTAACAACTCTGG
CCAAGCCAGCAATCTATTACCCATAAAAAGTTCTGCTTATCAAGGAATCGGTGACTATTG
AACTGACACCCATTTCTCAATCTTACTACTCCCTCCGTTCCTAAATAGTAGTATAAGCCT
TTTTAGAGGTTTCACTACGGACTACATACGGATGTATATAGACATACTTTAGAGTAAAGA
TTCATTTATTTTGTTCCGTATGCAATCTCTAGTGAAAGCTCTAAAAAGACCTATATTTAG
GAACGGAGGGAGTACTATTCAAACTAGTTCCCAGTCAGATTGGGGAAGAGAGATCACAAT
GTGCTCGAGTCGAAAGCAACTCAAGAAGCATGATTTGAGCATCACTGAGCAGCTCACTGT
TAGTAGGAAATAGATTCAGGGGGGTCTGTCACTGCTAATAGATCATGCAATATGTAGGGT
GTGCACCCTGAAAAGCCTATACCAGCCACATGATAAACAAATGAAACCCCATGATTAACA
AGAGAAAAGGGCAAAACCAAACGGCGATGTGTCACCCAACATCCTTTACAACCCATGTGA
ACATAATTAGATGGCCCATGGTGCACACCAAAAAACAAAAACAATGTCCACATCACACCA
GAAATCCAAGCCTAATTGTATATAGTAGCCGCCTACGAACAAAATCTGTCAATAGCGATG
ATCCAAATACCAATCAGTCAACAAAGACCAGGTCCATACCGGAATTCCGGTATGCGACCG
GGCCTGAATTGGATAAGAGCAGCTTGAAAGCCTCAGTGGCGCTAAGAAAGTAAAGCTAGT
GATGTGCTCCAAGTGAAGGTTTCCAAGAGTAGCCAAGCAGAGCAGAGATGGCTAATAACT
TTGCATATCATATCATATCATAACATCATCCATAACATTTGTCCTAAACAAATTTTGCAT
ATAAAGGTTTGGGGTTTGCCACTGCATATTGCATATTGCATAAGCTTGTTACAAAAGAAT
TCGGCCAGACATGAACAAGTCCATCCTTTGTCAAACACAGCATGCTCCATATACTACACC
AAGAAAATATTAAGGTAGGTAAGGTAGAACACGCTACAAAAAAGAATTTGAGATTGGATT
CCAAGGCGAAGCTAACACATTGTAATTGTATTGCTGCTCCGTCCCCTTCCCTCGCCGCCG
CCTCCCCAGATCTCTCTCCTAGGCCGGCCATATCTACACATCGGAAGCAGCAGCGGCGGC
AGCAGTTGTTGTTTCTTGGTCACGGGTCGCGGACGCGGGGGCTGGTGGCCGGCATGGCCA
CGCCGGGGGACGTCGGCGCCCGCGGCGAGTGGAGGCAGCCGAACCCGAGGGGCGACGTGG
GCACGAGGATCGGCGACGGCATCCCGCGGAGCCGGCGCATGTAGGCCGAGATGGGGGACT
CCGCCGACATGCAGACGGAAGGGAGCGCCGGGAGGGGGGAGAGCGTCGGCTGGGCCGGCG
CCGGCAGGATGGGCGCCGGGCGGGGCGGGGCGAGCGGCGGCGGCCGGATGCGGTGGAGCC
GGGACGGGAT