Contig Data
morexGenes
Links



Map Locations of contig_2548929 (3440 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548929

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37707 2 1387 bp AK248169.1 Available Available None





CDS Structure of MLOC_37707






Contig Sequence (3440 bp)

>contig_2548929 3440 assembly3_WGSMorex_rbca.fasta
TTAGTTATGTGTGTGGATCAAAGCATTAGTAGAGTAGCATGTCTGATGTTGATTTCTCAA
GCACCAGTGCTTATGATTCTGCTTCATGTGTTCGTTATGTCACAGCTTGCTCTAACTGTG
TGGATTGCTGAACATTTCAAAACATAACACCACTGTAGTTATCGGGTTGCCTATTTATTC
AAGTGTAAACTGAAATGAGATCTGAAATAACCCATGATTCTTGTTTACCACAGGATTTCA
AGTCTGTCACTCTCTGGGAGGAGGAACTGGTTCTGGTATGGGTACACTGCTCATCTCCAA
GATCAGGGAGGAGTACCCTGATAGGATGATGTTGACATTCTCTGTTTTCCCATCGCCAAA
GGTGTCTGACACTGTGGTCGAACCTTACAACGCTACACTCTCAGTACACCAACTTGTTGA
GAATGCCGATGAGTGCATGGTGCTCGACAATGAGGCTCTCTATGACATCTGCTTCCGCAC
CCTGAAGCTTGCCACACCCACATGTAAGTTTGGACATAGTATGAGTAGTTTTCTGCGGTT
AATTCCTATAATCTTGTCCCAGTTAATTTGAATACAACATATGACCTACAATTATATTCC
ATGATACTATTCTACAGTCATCTCTATACAATGTCATTCTTGTTTTTTGTTGGTGATATA
ATGTATACCATTGTGTTATTGATACTTATGTACTCCCTCCGTTCCTAANNNNNNNNNNNN
NNNNNNATTTCACTAAGTGACTACATACGGAGTAAAATGTATGAATGTACATTCTAAAGT
ATGTCTNNNTACATTCGTATGTAGTCTTCTAGTGAAACCTCTTCAAAGACTTATATTTAG
GAACGGAGGGAGTATATGATTATATTTCACATCTTACTTGTAGTAGTGGTACCTGTATGA
TCTGGTGATATAAAAAACTGAAATGAACATTAGCATTCTTTGTGCTATTAAATGTAGTTT
CTCTCATTTCTTTGTGGCATTTGCACATGCATTATTCTCACTCTGTTTTTCCTTTCATTT
TTCAGTTGGTGATCTAAACCATCTTATTTCTGCAACAATGAGTGGTGTCACTTGCTGCCT
CCGCTTCCCCGGCCAGCTGAACTCTGACCTCCGGAAGCTCGCAGTCAACTTGATCCCATT
CCCTCGCCTCCATTTCTTCATGGTTGGCTTTGCACCACTGACCTCAAGGGGTTCTCAACA
GTATCGCGCCCTCACTGTTCCTGAGTTGACCCAGCAGATGTGGGACTCAAAGAACATGAT
GTGTGCTGCTGACCCGCGCCACGGTCGGTACCTCACAGCCTCTGCCATGTTCCGTGGTAA
GATGAGCACAAAGGAGGTGGACGAGCAGATGCTGAACGTCCAGAACAAGAACTCGTCCTA
CTTCGTTGAGTGGATACCCAACAATGTCAAGTCAAGCGTGTGTGACATCCCTCCCACAGG
CCTGTCAATGTCGTCCACCTTTGTTGGCAACTCCACCTCCATCCAGGAGATGTTCCGCCG
TGTGAGCGAGCAGTTCACGGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACCGG
GGAGGGCATGGACGAGATGGAGTTCACCGAGGCCGAAAGCAACATGAACGATCTGGTTGC
TGAGTACCAGCAGTACCAGGATGCCACAGCCGACGAGGAGGAAGAGTACGAGGAGGAGGA
GGATGATGAGGTTGCTGCCTAAGCCACCTGACCTTGTTCCGTCGTCGTGCGGTCTGGTAG
ATGTGCCTTGTGTTTACTATTGCTGTCGATTTGGGGGTGCTTGTGGTGCGGATAGATCTT
TAGGTGGTCGATAACACTTATAGATGCTTTTGGTGCTTCGGCGAATCGATTTTTTTAAAC
TGTTTTTTGTATGTCGATGGTGCTTTGGTGCGAATTGTGTTATTATATTAGCGTAACTGT
GGAACTTAATACCAGTAAATTTGGGAATATTATATTTTGGTAGCTGCGTTGTAGGAAATG
TGGCACTTTCATGATTTCTGCATCTCTTTACCGTGCATTGTGTACCTCACGATTGTTCTT
CTGCATCCTTAATTCCAGCTGTTCAGTAGTATGTACTGAAATTTGGGACACGTTCGGTTG
CTCGTACCTTTTGTTTTTCCCTTTGCATACTCGTTCCTGGTTGACCATCTAGGGTAGAAA
ATCACTATCTGTACACTGTTTGCATTGGCTAGGCTCATACTACTACATGCTATTTGTTTT
TGTGTTCCTATGTGATGGACGAACAACACTTAACCACACTAACAAAACAACATGACAATC
ACGACGAACTGGATGTGATGGACGAACAACACTTAATCACACTAACAAAACAACATGACA
ATCATGACGAACTGGATGATGAAGTTCTTCATCCCAAAATATTGACCTGCCAACTTCAAC
ACGATCTTTATAGTAAGCATTCTCTGTTGCCTATCTACACTTAAACCATATGTGGTAGTT
GTTCTTATAACCTGACGCTTGTTCATCACATATTTATCATGAACTGTAAACCGTGGAACC
TTTTCTCGGAACACTACTTGTCCTACTTTTACAGAAGAGAAACAATTCAAGCAAGCAATG
GAGCACACAAAACATGTAACGGAAGAAAGCATGCATGATCATACTGCATATCAAGTTCAT
ACTAGCACTACTATGATGTCATCCTACCATCACATTCAAAAGAGGGTGTTATCCTACCAT
CGCTAGTTCACCATCGGCATGAGGGTTAGCATACCACCTCAGCAAAATATATAGGTCAAC
ATCAAGAGTTGACCTCACAACCTGAGGTTGTTGTAGACGTAGGTAAGGTGACTTCCTCGC
TGGAAAACTCGAACATATGCTTTGTAGGACAGTTCAAGTGCACCTCCTTGAAGTCCTTGT
TAGTCCTTACACCACTCACTATGATTTGCCATATCTTGTTAAGGACGAACATCGACAAAA
ACGGCTATCATTTCATGGAGTTCCCCATACCATCCTTCTTTGCTTTGGCGGTTGACTTTT
GAGCAATAACATGAGTTGCAACATTGGGTCGGGCCAGCACATATGTTGTAGGCATAAAAG
GTGGAACCGTACTAGACACCTAAAGAAAATCCGAACTAGGAGACATGTGGTCCTCGATGG
GAGGCTCATAGTCCTCGACATAGGATGCAACGAACTGAGTGTGGGACACGACAAGGGCCT
GACTTAACTTTCGCGTGTTGATGTCCTCCGTAGCGCCACCGGGGCAACCATCGTGACGAC
AATCTATACCAACAAATTCGCCGCCGTCACCACCAACCATATCCTCCTCTGTGTAGCGGT
GTAAAACCTCTCTTCGCCGCTGTAATCTCTACTTGAACATGATGCTTAATGCTATATTAT
TATCCAATGATGTGTGGNNNNNNNNNNNNNNNTGAGTAGATTTCTTTTGTCCTACGAGTT
AATTGTGATATGATGTTATT