Contig Data
morexGenes
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Map Locations of contig_2548782 (5202 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2548782

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37646 2 1760 bp AK362947 Available Available None
MLOC_37647 2 1064 bp MLOC_37647.2 Available Available LOC_Os10g30690.1, FRAME:-3, EVALUE:1e-25, 13110.m02649 protein MYB family transcription factor, putative, expressed





CDS Structure of MLOC_37646






CDS Structure of MLOC_37647






Contig Sequence (5202 bp)

>contig_2548782 5202 assembly3_WGSMorex_rbca.fasta
CCCGGTACGCACGCGCCTACCTACGCCACCAGCTGATTCTCGTCCCAGGGAAGGCAAGAG
ACAACGCGTTCTGTTTGCGTTTGCTAGAAACGGTTGTCGCACGCCACATGTTTGGTGTTA
TGCCTAGGCGGGGCTTTGTATTTACTAGAGTAATCAATCGAGAGCTAGGGGTAAGTTTAG
CAGGTATTTTGAGTCATGGCCTGCACTGCTGATATCTGGCCACCAGATGCAAAGATTGAA
CCCTCGCATATAGATTAGTGGCTGACCTAAATGGTCATATTTATGTATGGCCGCTCATGC
CTGGATTTCTCTTGCCTTACATCCATAGGATGAGCAGTCTATGCAATCTACTCCCTCCGT
ACCTAAGTAATTGTAGTTGGGGAGAACTAGTCTACTTCTCCCCAACTACAATTATTTAGG
TACAGAAGGAGCAGTAGCTTCCAGTATTTAACTCTCAAGAGCTATTCTTACGAAAAGAAG
CAGCCTGTTTAATACTCCTATCATAGTTTACAGTCGCGTTAAGTGTAAGCATCTGATGCT
ATGCCAAGGTTGGACTTTATTTATACCGTGTGAGACTGACGCTCGCTGTGCGGACAGTTT
CAGGAGATCAAAACAGACCTGAATGGCGCCTCAAAAACTGAGGTTTTCGCATGCCCTGTT
TGCTATGAACCGCTGATAAGGAAAGGGCCGCCAGGCATGAACCTGTACGTCTAAAGTCCA
TGAGTTATCTTCGTCTCTCATGCATATCTGGTTGCTGGATTAGTATTTATGTTGTTTTGG
CTTCTACGCGTGTCCCAGGCCAGCGATTTATAGGTCTGGATTCAAGTGTTCAAAATGCAA
CAAGTCATTCACCAGCAAAGATGTCTTCTTGGATCTCACTGTCACCTCAGGAATGAAACA
ATACAGTGAACTGAAACCTGCTAGAACCGAGCTGTTCAGGAGCCCGCTCGTCTCTTTTCT
TTACGAGAGGGGGTGGCGTCAGAACTTCAATCGGAGTGGCTTCCCTGGCCGCGATGAAGA
GGTACATTTCTTGTCTGTCTCATTCCATGGACTTAAGCTATTACTGCTTAGTGAGAAACT
ATCTATATTAAGTCGTACATCTGTCAAAGCCAAGTATTTGGTGCTTCCTGCTTTGGTGTT
GCAACGAAAAATGATCACCTCTCTTTCATGTAAAGATAATATTCATCTTTTTATGCATAT
AATTTTTATGTACTGTTGGCTTTATCAGTTCCAAATGGCGCAAGACTATTTCCAATCAGT
CGCTGGTGGCATACTTGTTGATGTCAGCTGCGGCAGTGGCTTGTTTTCAAGGAAGTTTGC
AAGCTCTGGGGCATACTCGTCTGTGATTGCTTTGGACTTTTCTGAGAATATGCTCCGCCA
ATGCTATGACTACATCAAACAGGAAGAAACCCCTATGAACACGTGAGCTTTACTTCGTGC
TTATTTTGAGCTTTTCCTGTAGGACTTGAAAAAAATGCCTTGCAACATCGAACTCTACCA
AACTGTCATTTAGACAACTTTGGCATCACTAAATTGTTTGTGGAAGCTAGTGGTTTGTAT
TATTTCACTACCAAAAAACTTATGACCTCTGTGCTCAACATCTAATTGAACAACATTCCT
TTTGTTTGAAGTACAGTACTGTAATAATAAACATTCATCAGCTGTATTCCCTGATACTTT
GAGCAAATAATTACTGTTATTTTCTATTGGTTCTGCAGGAACCTTGCACTTGTAAGGGCT
GATATTTCGAGGCTCCCTTTTGCTTCATGTTCAATTGATGCCATTCATGCTGGAGCCGCT
ATCCACTGTTGGCCATCCCCTTCAAATGCGGTATAGTACCTGTCTCATTTGCACTTTTTG
ATTCAGTATTATACATGGTTCATGACTTCAGATGGTAAAACTGGTGTCTTTAAAATTACA
ATTTCATTCGTCCAGTCCACTGAACAATTAGCCAATCCATAAAGTTAAACCACTTTTGGC
ATTACATGACGAATACCGTTCCGTATTTCTCTGTATTATTGACCGCTGAATGAATTTTAA
TGTCAACCATGATAGTTTAGTGCTTAGTTAGTATGCTTTGGACAGCTTTGTGCAGGAACA
GGGCATCGTGCGATGACCTGTGTACCTATCATTTTGTCATGTGAATTTATTCATCAGCAT
GACATCTCCTCCTGCTGCTGTTTGAAAACCAGATAGCTGAAATCAGCCGTGTGCTGAAGC
CCGGCGGCGTATTCGTAGCGACAACCTTCTTATCCACCCCCACGAACAGCGGCCTGTTCT
CTATCGACGCACTAAAGCCACTGAGACAGGTAAAAGAAGTCGTCGGTCGTCTAGCGCTAC
TAGTTATTTTCTGTGTGGCAGAGGTTACCTATCCTGATGTGCCTTCTCTGCTTTGTGCTG
CAGATTGTCGGGCCAGTGAACAGCAGCTACAACTTCTTCACCGAAGGAGAGCTGGAAGAC
CTGTGCAGATCCTGTGGCCTGGTCAACTACAGCAGCAAGGTTCAGAGGTCATTCATCATG
TTCTCTGGGCAAAAGCCGTAGCTGAGTATCACATCCAGACTTTCTTTGTATAGCCAGCCA
TGGTGCATATATAGTTGTGCTTCTTTTTTACGAGTATATGTATAGCTGTTACGGTTAAGT
CGGGTGATGAAAATGTAACTCAAACGCACATCAGGTGATTGAACCAAAATGTATGGTCTC
TGGCTCTGATGAACAATAGTACTGTAGCATTTCTTCAGGTTCAGGCATTGAACAGAAGTT
TTACACCTGAACAACTGTGTTGTTTCTGCACCATAAATAAAATTTTAAATTAACTGTGAA
CTATAATCTCTTTATGGTATCCATTTCTGATTAAGCCCGAAAACAACCTGAACGTCTATT
AAAATCTTCTGAGTACAGACTGAATTCCTTTTCTAGAGAAGAGCAAGAGGGGCGAATCCT
GGCTCCAATTTTTACAGAATGGATGCAACCCAAGAGAGTGTCAGTTAGGCAGGAGACAGA
AGCTGCTCCATCCAGATGGTTCAACCTACACTCTACTCTCGTCACACTTAATATGACATC
CTACGCTTCGCAGTTCTTGAAAAATAACAGAACTCTTGTTGCTGGACCACTGCTACACCG
AAAGTACTGTACGATCATTTTCGAGGGTAATCAGCTGCTAGCCTCTGGATCTTTTCGACG
CAATCCTTATCTAGACGGGGCGAGATCCTTCTTTTCACATTTCCCTGGAATTCAAGAAAT
GTAAGAGATGAAAAATCAGTGGTGCTCCACATGATGAGTTTGATAAAGTTCTGATATAAA
AATCTTATTTTTAGATGTGAGCCCGACCGTGAAGGCTTTCACTAGGTTTCTCCACTTATC
CTGAAAGATTAAACAAAACACAAGAAATTAACATCTTGTACAATAAGATATATGTATATA
TAGATAAATAAAAGATGAACAGAGAAAAAGTAGAAAGCAATGAGCAGAGAGAGCATGTTC
TTTAGTGCAATTAATCACCAATTCTCTATACCTTAAGATGCACCGCCGTTCGAACTGATA
TTGGAAACCTTTCATTCTTCAACTTAGTCCACTGTCTATCCCCATATACAGATATGCCAT
CCACTAGTTCTTTCACCTCTTCAGATGTCCAGTGGTCATTGTTTCTTCTGCGCCCATGTT
TTTGGCCTACACTTGCAGAGTGCAAATCCCGGAAGCATGGTTTTATGTTTATCGACCATG
TTCCTCTCTCACGCGCACTTCTCACACGACTTCCATGCCTCCAACCACTTTTTGGTATGT
AATCTGAAGCACATAGGAAATGTGTTTAACTACTTGAGACAATGACAAATGATACATTGC
AACAAATGGAGCCTTCATAATTCATACCTAGTAGATCGCAGGTCCATTCCTCCGGCGGTG
TGGCGGTGCACGCAAGCCTCCTGCTTCTCCGGTGACAAGGCGGCGGGTACATGGCCCATC
CTCCCTCTTTCATCTCCTCCTCTGCTTTTGCTTCTCCTCCTCCGTTGAGAGTCGTGGTTG
CAGGAGCCTCCTCTCTCTCAAGCAACACCTCCGGTTGAGCAGGCACATGTCTTTGTATTG
TCATGCCATCATCACTAGTTGATGAATAAAATTTACATTCAATCTGCAATGATGAAACAT
ATTTTGAACACCATTTGCCGCGTTCATTTGTTTAGCAAGTTTGTACTTTTGCATGTGCGA
AAATCTTGCCTCATGAGTTAAATTCACCTCCTTTATATAAGTAGGAATGAATGCACCTGC
AAGGAAAGCTTCATGCATTAATTGGTCTCAAAGTCGAACCATGGACAAATTGGTTGCTTG
TGTAAGGAAGTTTGGAATATACCGCAACAATTAATCATCGCACCTTTTAGCCATCTGTGT
AGGTCATGTTCATCTTGGGGTCCTTCTAGAAGTGCTTGAAAATCTATGACGTCATAATCA
ACATATGTTGAGTGATCTTCAATCTCCATCTGTCATGAAGAACAAAGAAATATATGTTGC
TTTTGTTGTGAGCTTTATATCCAAGTTAGATTTGATAAGATCTAAAGAGCGTGGATCATA
TGTGAACTTGTCGACATATATTACATCCAGTTAAAATGAAGGTTGGATAAACCATGGAGT
ATGCTTCAATATTTTTTTATTGACTATTTTTGGTTGTGCTAATACTCTTCTTTCGGATGA
CTTCCAATTTTTTTCTTTTAGACATATAGGCCGGCTCCACTTCTATATTGAAATGAAACC
AAACATCCAAGTAGTCATGGTCTCTGACATAGATATGTTAGCTTTTTATTTTTTGCGGGA
AAGAAAAACTAACCAAGCGAATACCTGATAGCTTGGAAGAGGATCGGACATGATGGGTGC
CCAAATGTCAACTTGTTCCATTGTCAGTTGGCAGCTATCGTCACACTTCACTTGTCTAAT
GCAGGAAAGCGAAATTACGTCTAGAGTTAGTATGTTTATATTAGCTAGTACTCCATAGTG
AAATTACGTCCAAGCGAATATTAGGAGTACAACATACTATAAATGGACTGATGGAAAAAA
GAACACGTGTTCCATCCAGTAACACATAGTGTAGTACTGTACATGCATGCATGGTAAATC
TGTTGAAATTTGGAGGTGGGCTTTAGGCCCATTAGAGAATTTCATAAAAATCTCCAAGGG
CCCATGTAGGNNNNGGCATGACAAGGTGGTGGGAGTTTAGTC