morexGenes - Barley RNA-seq Database

Contig contig_2548710

Source Contig contig_2548710

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2548710 (2422 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2548710

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_37609	4	1139 bp	AK375557	Available	Available	None

CDS Structure of MLOC_37609

Contig Sequence (2422 bp)

>contig_2548710 2422 assembly3_WGSMorex_rbca.fasta
ATTCAGTTAAACTGAAACACACCAGACAGGTTTCAGACTTTCAGTCAACTCAACTCAAGT
TAAACTGATTTACTATTTGTGTACAGATACTCGTTGTGATCAGGGTAATTGTAAGCTCTC
CCATTCCGCATCCCTATAACCGATGAGCGATGCCGCCTACCGTTCCATTTAGTAATCATC
TCTTAAGTCACCATTAATCTCCACATGCAGTTCATGCTCTTCATCTTTAGACAATGTGGG
TGTGTTGTTCCAACTGCTCTGAGATTGCTGCTTCCACATTCATGCCATTCTCTGGTGCGG
AATTGGTTAAAAATATTGCCGACGATAGATTGGCCTCTCGATTTTGATCTTCCTGCACAA
AACGGTTATGCACGGTGATAAGGAGTCCCTTTGAAAATTTCAGGTGTCGATCGAGTATGG
ACTGTCCGAGATGATGAATGTTGAAGCGATGGGCGCTCTTGTTAGCCAGGTCGCGCCCAA
CGTCGACAAGTGGTTCCCCGACCTGGAAGAACTCGAAGCCATCTTACCATCTGGCAGCAT
CGACCATTCTACAGAGCCGCTCTTCCCGGAGGTCACTTCTGATTTCTTTCATTTTTCAGT
CACCATTTACACATCCAGTAATCGTCTGTTAAAGTCACCGTTAATCTCTAGTGTCTGCAC
GCAGATCACAGAAATCCATCATATATATACCTGAAACTGTCAACCTTTTTCCACTGCAGG
TACCCAAGTGGGGAGAGTCTGTGAAGGGGGCCAGAATCAGATATGCCAGTGTCATCAAGG
CTCTTGCCGACAAATACCCTGATGAGAACTTACTCTTAGTGACACACGGTGAGTTGAGCT
CGGAAGCATATTTACCCGCTATCAAAGCGAAGCATAACAGTTTTAGATTCAGTTGCACCA
GTGCACCAATATGGTGTATCGGTCGCTCCAATTCTACACTGGACTGAAGACTTGAGTTGG
TTTGGGTTTGTTGCAGGCGAGGGCGTGGGTTCGTCGGTGGCGTGCTTCGGGGCGACGGGC
ATGGAGGTCTACGAGGTGGAGTACTGCGCGTACACTGTGCTCGAGAAGCAGCTTCTTCAT
CCCGGCGGTGAGAGCGACGGTGAGAGCATGCTCAAGGTGGTGGAGAATCGAAGCGGCCCG
ACCACGGGCATACACTTCCTTGTCACCTGATAAACACAATGGAGCAGCATGATGCCATCG
CCATCACCATCCCACTCCTCGAGCACTGGACGGTCACTGGGAGCTTGATTGGTTTAGTTT
GGCAAATCCGTATTTGTTTCCACGAGATTCGTCGTTTGGGTATGTCATCTTTAGAAAACT
GTGGTTGGTTCGTCCCGCGGATTTTGCTTGTACAATCTTGGTAATAATTTGCTAAACTGT
TTTTTCTTTTAAGACAACTTTGCCTGTTCATATCGATTGGATCGGGACGATGGCTGCCAC
TGATCCTTGCTGTCAGCGTTGGCATCAACCGGATCGGTTCTTGCGCGCAATGCGATGTAA
TCGGATTTTGCATTCATGCTTGAGAAGCATCTATCTCTCTAGGACCTGTGCCATGTTACC
AAACCTGAACTTTGAGTTGTTTTTCAGTCAACTGAGACACACCAGAGAGGTTTCAGACTT
TCATCAGTTAACTGAACCGAAGCTAAACTGACTGATTGTTTCTACAGGTACTCATTTATG
ATCAGGGTAATTGTAACAGCAGTTTATCTTTCCGATTTGCATCCTTATAGCCGACGAATG
GATTACTGGGATAACTGACCGACTGTTCCTATTCCTTAAACCTGAACTGAAGCTTCTTTA
TGCGGCACACACCTGAACTCACTCTAGTTGACTCTCTGAAAGAAGCTTAACTTGTTGGAA
GAGATATTGATTTATGGTGATTGTAGCATTAGTTTCCCTCTACCGTCTTGCCACCGTGGT
CGGGTTGCATCGCGGATTCGAGCTTCAACTGTTGTGAGCTTATTTTTTTATACTCTCACT
AGCAAAAGAGCCCGTGCGTTGCAACGGGAGAGAAAATAACACGTACTCTTAACACAATAA
CCACGACTCAAGACCTTAATAGGTATACGTCTTTTAGTTTTAAATGACATCACATTTTAA
GGTCCCTCTCTCTCTCTCTCTGAGAGAAAATTCAGTACGTTCAGTATGCTTAGTTACAGA
GGGAGTATACGCCAACTCGATGCATATTTAATTAACAAATCAAGAAATCAAAGCATGAAA
AAATATTGCATACAGGTATTTCAAACAATTTAAATTTATGTCATCTGATTATTAATGAAC
ATGTAATAAGTAAGCATGGATATGATCTTACTTGATGTTTCAAGTTGCATGGTCTCTCTC
CTCCTCGGTGATGCCCACAAATATTTGCATGACGATGAAATAGCAAAGTATGTTTTATTA
ATTAATGATAGCATATGCATAA