Contig Data
morexGenes
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Map Locations of contig_2548649 (3431 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548649

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37570 1 817 bp MLOC_37570.1 Available Available LOC_Os10g39610.2, FRAME:-1, EVALUE:2e-33, 13110.m03633 protein expressed protein





CDS Structure of MLOC_37570






Contig Sequence (3431 bp)

>contig_2548649 3431 assembly3_WGSMorex_rbca.fasta
ATGCGACGTTCCCCAACAGCCACATATCGGGTCTGAGGCCCAAACCAGCCCGACACATTT
TCATAGGTCGTCGGTGCCGTCTTCCATCAATCTACCTTCATAAAAGATATCGATGCATCG
ACCTTGTCAGGCTTACCGTCTATGTCCCCACGACGTCAAATAATGCCTCCTCTCTACACG
CATTCGTCGTCGATATTTTGCTGCATCTCGCTATCAAGACTCTGCAACGTCGATGGGTCA
TAGGGAACGCCGCTCCATTATGAATGTCGTCCACTGATTCCTTAAGTGTATGCATACCTT
TAAGAATAACGCCCTTAAGAAGGTGGTTCCTTAAGTGTATGCATACCTTCAAGAATAACG
CACTTAAGAACACATGTCATCCAACGCTCTTAAGAAGGTGGTTCCTTAAGTGTATGCATA
CCTTCAAGAATAACGCACTTAAGAACTACACATGTCATCCAACGCTCTTAAGAAGGTTAC
AACACATGTCATTCAATTAACTAATTAGGGTTTTCTTTGAAAGTTGTAGATATGGGTCAA
GAACTTCTTCACTACAATGCCTTCAAAGAGAAGATGACAAGGTATCAAAAATATGGGTTT
TTTATCAAATTCATTTGAAAACCCTTCATCCACCACGTCATCGATTATAGCCGCCGTGCA
TGAAGATTGTATTGGCTGGATCGGATCTAATCCAAGACCAGGCCCAATGCCTCCGCCGTC
AGGGTCAACGTATCTGACCCAAGACCAGACCCATTGCCTCCGCCGTCAGGGTCAACATAT
CTGACCCAAGACCAGACCCATTGCCTCCGTGGTCTCCGCCGCCAAGGTTAAATCTTTTGT
CACAGGCCTCCGTGGTCTCCGCCGCCAAGGTTAAATCTTTTGTCACAGGCACGCAGCCAA
CGTAAAACGGTTCTCCCATCCTCACTGATGAGAAGCCCTAGTCGTTGATCCCCGCGCCTC
ACTATGTCCTTCTGATGAGACGCCCTAGTCGTTGATCCCGTCGTTGATCCCCGCGTCTCC
TGACTCTGCTTCGATGAGTTTGGGGAAGGCGGTGAGAAGGCGAGCTAGTCGTTGATCCCC
GCGCCTCCTGACTCCGCTTCGATGAGTTTGGGGAAGGCGGTGAGAAGGCGAGGGAAAGAA
GACCTGACTCCGCTTCGATGAGTTTGGGGAAGGCGGTGAGAAGGCGAGGGAAAGAAGATC
TGTGCCGCCGACCGCGGAGGGACGACTCGGGGTTGTTGGAGACCTTTTTTTATATATAAT
TGAAGTTTTAGATGTCCTAAATCAAACGCTCTAGAAGAATCCTAGAACTTCAATTATTTT
CCTATTTTGAAACAAGTTCAATTTAGAGCCATCCAAAAGCTTCAGTTATTTTGGCCGAAG
GAAGTAGACGAAGTAACACACATAAACTATTTATTCGTTCTTACACACTGATGCGAGTAG
GTGGTAGGTAAATATACACAACACTTTCCACACACGCACAAACAAGGTAGTAGTACACGA
CACGCACACACATGACTGATCACGGCTCAGCGGCACTTATTTATGGCTAACTCAGTAGCT
AGCTCGACTACTGGTGCATCAGTTCACGACTAGTGGCGCGTCGACGCGATCAGGCGGTCG
AGCCGCATGAAGCGCAGTTGCAGGCCGCGCCGCAGGAGCAGTTGGACCGCCTATTCTCCC
GCCCGGACGGCGTCCCCTCGCGCCCGCACGCGCACGGGTTGCACCCACAGTGCTCGCCGC
ACGCGCACGTGGTGTGCTCCGCGCCGCTCCTCGCCGAGGTGCACCTGCAGCCCGTGCCGC
CGGGGCACGGCACGGCGCACCCGCACTTGTCGTCGCAGCCCATCTCGATCTTCTCAGGCG
TTGCCTTGCACGTAGCTCTTTTCTCAGTTCACGACTATGGCCACACTCGATGCCAGAGCA
CGGAGCTGTAAGGGGTGCGCCGCGTGCGTGACTATATGAAGGGCGGGCTTAAGCGGTGGC
ACGTCTTTCGGGCGTCCGAACTGCCGGCGTGTGGCAGGCCACAGCGGGCGAAGTCCACGT
GGGGTACACGGCAGGACTTAGGGATGATGTGGTGGCACGTACGCGCGGCCGCCACGGCAG
GAGACGTGTACAGTACAACAATGTCCAAGGCACGGGCATGTATATCCGGTAGATGGAGCA
GCGCATTTATATTGTGAACGTAAAAGTGATTGAGAGAATGAACTTTTAATTTCACTGATT
GAATTTTAGGGCACACACACATTGATGAGTTCTTTCTTTGGAAATAATACTTGTATTACT
CAACACTCAAAGATTATAATCACGACTGACAATGCCCAGGAGTTCATCCAGATCCGAACC
AAGCCACACAATAATTCGGCATTGTGATCGTCCAAAACTGGAGTTAATACATGTTTTAGT
ACATAAAACTTGTGATGGTGGGAACAATTCCATAAAAAACTAAAAAAAAATACCTAAATA
TAAGTCTTTTAAGATATATCATTAGATGTCTACATACAAAGCAAATGAATGAATCTATAC
TTTAAAATNNNNNNNNNNNNNNNNNNNNNTAGTCCATTAGTTGAACCTCTAGAAAGACTT
ATATTTAAAAACAGAGGGAGTAGTACATGAAGCCTACTGATGTAACAAATACATACAAAT
CGTTTACAGCGTGACATTTGGCAAGCCACGTCGGATGAAGGCACGTCCAGGGCGTTTTGT
TATGTTTTAGAAAGCCTCCTCAAGATACAAAAAATTGTAACGTGTCGTATAACCGAAATC
CTTTGATGGCCTACTGGTACACTAATTGTTGCTGTACACTACTGGTCTTGGGTTTGATTC
CCAGCACCCTAGTTTTCGTTGTCAATATTTTTTGTCATGTTAAGCAGAAGCAAAATTCAG
TCATGTTACACCAGAAGCAGAATTCAGTCTTTTTGATAGCAAAAGAAAAATCTGTCAGCA
AACAAAATAGATGTTAATATTGGACAGGTGCAGAAAAACCGATGTAGAAGCTTATGTTTG
CACTGAATTTGACAGGAAACAAAATAGATGTTAAAACTTAGAGATAATACATGTTTTAGT
ACACAAACTTGTGGTGATGGAACAGTTTCATACAAAAACTTAAAAAAACCCAAAAAATAG
TACATGAAGTCTACTAATGTAACAAATGCATAAAATTCTGACTGAACCAGTCCGCGTGGA
GTGCCACGTTAACAACCTGGCGGGCCGGAGCTGCATTTATGCAAAAAAAAGCTCGGACTT
ATCGTAAAATTCAGTATTCCGTCCTTACTCGTGCATGCTGAATAGAGTTTCAGAAAAGCA
CCCTCCACTCGCGCATCCGACGCCCACGTAACCCCTCCCCAAACCCTTCCCTTGTCTCCT
CCTTGAGGCCTCGTTTGGTTAAGGGGGATTGGTAGGAGGGGTTTGCTTAGCCCAATCCCC
TCCGTTCCCCT