Contig Data
morexGenes
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Map Locations of contig_2548628 (2188 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2548628

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37557 1 880 bp MLOC_37557.1 Available Available LOC_Os01g40250.1, FRAME:-3, EVALUE:4e-35, 13101.m04117 protein down-regulated in metastasis family protein, expressed





CDS Structure of MLOC_37557






Contig Sequence (2188 bp)

>contig_2548628 2188 assembly3_WGSMorex_rbca.fasta
CCCCCCCCACACACACACACACATGGGGCACACACATAGATGACGTGGCCACAAACAAGA
TCATAGCACGACCAATGACACGATCGTCGAGAGGAAGCACTAGGCAACAAAGCAATATCA
AATAGTCGACGACAAGACATGGCAGCTCTGATTTTGCTAACAAGCTTCACATGAGAAAGT
TGCAAACCTCGCACCGGCTCAGCTGAAGACTGCCCTCATGAAGTCATTGTTGTCGCAGTG
ACCCCGCCGCTCGCAGCTTCAACTTCTCTGTCACAACCAAAAACCAACATAGGCACACCC
ATTGGCGCACCCGACCTTCAACACCACAAGGACAAGCCGTGACCCGGCTCTGCTCTCCAC
CATCGTCGCTCCCACACGCGTCGCAACGCCACACCAACCTTACCGTCGACCTGGCACCTG
CCGACCACGATGATGTGCACGTCCAGTCTGCAGGAAGCACAAATGGGACCAAGAACTCCA
AGACGGTGCCCCAAAGACGAAAAACGACGTTGAAGACGCCGCTGCAGCCTGATCCAACCA
AGATCTTGAGTTTTGCCCGAAAACCTTGAACCGGGAGAAGAGGATGCAGAGATCACTCTC
GCACGGTTGACAGCACCTCCACGACAACCGCGCCATCACCATGCAGGGACCAACACCATG
CTTCTTTGTCGAGCAAACCACGGCAAGCGTTCGAGCAAGGATGGGCAGGCTACCACCTTG
CACCACGTCATCAGTCTGATCTGGCAGTCCAGAACCCACATAGGCCGCCAACGCTGCATC
CCAAACAGCAAAGACACCAGAGCTGCAATCCACCAAAGTACCATTGTCACCGAGGTGCCG
AGACAGAAGAGACAAGCCTCCCACCACAAAGCACGTCGCGGCTATCGTGTTTGCCAGCCA
TCGTCACATCAACCAACGTCCAGAGCCACCGCTCCAAATTCCACCCCTCGTTATTCGACG
GAGCTTGTCGTCCCACCATGAAGCCACCAAGCATCACCATGCCCTTGCACCCTGAAATCT
AACACGCAAACCTACAACCCCACCATCGAGCCACCGAGCACCGGGCCACCATCACATCAC
ACGCCACACCATTGCCACGCCACCATCAAAACACCGCACCCACAATGTGACCACGCCACC
ATCAAGAAGACGGGTTGCAAGAGACCAGGGAGGCAAGGGACTTTATACGACGGTGGCACT
GAGTCCCGGTGTCACCGAGCCAAGGGTCGGGTGTTCTCTCTGCTCCTAACTGTGAGTGCC
TATAAAAATAGAACGTACACCATCGGCATACTCTCAAAAAATAAAAAGTGCACACGCCTC
ACCTAAGCACAAAAGTATCGTCGCCATTTTTGCACGTTTAGATAAGCAAATTCAATTCAT
TCACTGGTTTCTACAGGTCATCAACAAAACTGCAATGGTACAGCATAACTTGATCGATAT
ATGCATGTATACATCTAGCATACAAAATTTTCTGCCAGCCGTCTCAAACACCACATGGAA
CGTGTGGTAAGCTATTTTCAAGGTCCAATAGCCGAACAACATGCCTCACAGAAGTGAACG
CTGTACAACTTGCTTCGGCTTGAAGCTAAGCACCAACAAACACTACCTCATCCACCTTCC
CATCTTCAACGCTGTTATCTTCCGCTTCTTGTGTTCTCGGTGCTTGGCAGACATTCGCAA
CTTCCTCTTGGCGTGCCGCGCTGGGTCGACGGCTGCAACAAGCTTCTCAGCCTGCTTTCT
GCTCTCCCTCTTTGCTTTCAGGTCCTTACGAACACTGTTGTAAATTTCCACAAACTTCTC
AACACCAATCAGATCACGTAGTTTGTCCCTGGTCACCTCTGCTGACTGCTTAACTTCATC
TACAAAACAACAGAGTAAAATGTTATACCTTAGGCAAAATTACATGTAAGCTGTGGAAAA
AACATGTCTCATTCGGCAGTAGCACAAGTTTTGGCTAAGAAAGTTGAATTTTATGTGTAG
CGCAAAGGAGTTGCNNNNNNTTCTTATTCCTATAGAACATCTAGTAACAAGAATATGAAA
TCGTAAATAGCGAAAAAATCTCGTCTTGCGCAGTCTAAGTCTAAGGAAATACAAAAAAAA
TCGCTTATACAATTTCATCTACATCGAATTTATATATCAGAATAGCGGATAGAGGCATCA
TTCAAGGAGTCAGGTCTACTTACTTTAT