Contig Data
morexGenes
Links



Map Locations of contig_2548618 (5336 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2548618

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37553 4 2108 bp AK374038 Available Available None





CDS Structure of MLOC_37553






Contig Sequence (5336 bp)

>contig_2548618 5336 assembly3_WGSMorex_rbca.fasta
TGGGGGCGCTATGTTTCGCCTCCCCGCTCGCGGAGCGGGCGAGACGAGCGAGCCCCCTTC
ATGAATCTCTTCTCTCAACATCTTCTTCATGCCTTCATTATTGATCATTCTTCGTCTTTG
ATTCTAAAGAATTAGACATTGCTTTTCCTCTACTTTCTTCTTTAATTGTACATGCAGCCG
CATCGTTAGCTTCAATTCTACCAATGAATACACAAACATCTATAAAGTTTCTTCTTATCA
GTAAACCGATGTATTTTTTTTCTCAATATCAAAATGAGCATTCATCTTCCTACACACATA
ACTATCTCAATAATCTATCGAAATTAGAGCGGGTGGTGCGAGCTGTGAGAGGCAAGCAGT
TGCGTGGTCAACACAAAGCGAGCTATCTTTTTTGCTACTAAAGAATACCGTGTGCACGCC
ACACTAAGCAGCATACGCTAATTTTTGAAGGGTGCCTTCTCCCTGTGAGAAGGCCCCACC
AATTTTGAATTTTAAATTTCTTGGTGTATTTGAAAATAAAAATAAAGTCTCAGGTTGATC
GACAAGGAAGGAAAAACTTGTCTTCAGCGCTTGGACAGCTCATTTTGACTTGGTCTTGAG
CGAGCAGAGAGCGAACCGAGTAGTACATAAACTACGAACCGAAGTCGACCCCAAAAGTCT
CAAGTCTCTTTCACACACGAACGTGTGCGATGAGCGGAGCCAGGTGGATTTCACATGAGG
CTACGCTGCCTCCATCCTTTCCCCTACATTCAGTTTAGCCCTTGTTAAATGTTGGGTCAT
GGTGAGGTAAACCTTGTTAAATGTTGGGTCATGGTGAGGTAAACCTTGTTAAATGTTGAG
CATATGACATGGTGATGTGTGTTTCCGTTTTTTTTATAAAAAAAAAAGGAATACCGTGTG
CACGCCATAGTAAGCAACATATGCTAATTTTTGAAGTGTTTCTTATCCCTGTAAGAAGGC
CCACCAATCCTGAATTTCAATTTTTGACGAATGAATTAGTAGTAGCATCACCTTTTGCTG
GGCACTTCTTTGAGATAAAACCTTCTTGGCATTCCGAAGCTATGTTCCTTCTGATGATAT
TGCCTTAAAACTCCAATCACCGTTCTGTAGTTGGAAATGTTGCAAATTGCATTCTCTCGG
AAGGGGAATAATACAAGACCAAAGAATGAAAGAATTTGTATTGATCTCTGTATTTGTGTC
CAATTTGAACATCACGTATACACACATCACTACAAGATCTACACAAGGAGTACTTCGTTT
TGCTCCCAATAACTTTATTCCCCTACCATATGCACAACTGATGAACAAGAATAGCTCGTT
CATCATAAACTGATCAGTAGTCCCTGCTGCAGATGCGTGGCATGGAACGCCTCTCTCGGC
GTCAGCGGCTCACAGCCTCTCGACATCGGGCTGCCACCCCTCTGTGGCGACGAGAACCGC
GACGTCGCCCTGCCGCCCCTCCTCGGCGACAGGTGCACCTCCTCCAGCGCCCGGTGCTGG
AGCTCCGGCGGGTAGTCCCTGACGCACACGATCCGGGGTCCGGCGCCGGTGGTCCACTTG
AAGGACACTTGCTTCCCCAGCTGATATGAGTTGACCCTCCCAATGACCTTCTCCCTTGAC
ACCACGGAATGATCATCATCACTGTCCCCCTGATCATCTTCAGGCATGGAAGTTATTGAT
TTTTCGATGTTTACTGCGCCCTTCGATGAATCTAGCCTTGCCAATATCTCCGGTTGGCTA
CGATCGTTGCCTGTTTCTTGGAGTTGGAAGACTTCTTCAGGTGTGGTTTCAGTGACCTCA
GCCAGGCAAGGGATGGTTTCTTCAGCAGGAACCATTTCATCTTCGGGTTTGTCGCCATCG
ACGCACCGCTCAGTAGGGATGCTTCTGAGCCTGCTCCAGAACTCCTCATCCTCTTCAGCT
GGGCTCATCTGCAATCATGCAAAGAGAACAACTGAGAAAATGCAAATTGGATAATTTTAT
TGTCACCGCATTTTGGGAACTTTCTCATTCTACCCCAATCATCTGTCACAGGCATGGTTG
CTCACCTTAACATCGCTGAGATCGACCTTGTTCTCTCTGAGGAAGGCCTGGAATTCCTGG
AAGTTCTCTTCGGTGGGGCGGTAGTGCCCGCTGTGAGGCCAGATAGCCTTCAGAACTCCA
TCTTCGACAACCAGTCGCCCGGCAGCAGATGTGGCGCCTCCAGCGAGAAAGCTAGAATGC
TGAAACGTGCCCTTTTTCTTCTGCAGAAAGTAGAGTTTTGGACAATGTTAGATTACTATG
ATTCAGTACACATAGGTGATAGGTCCAATGCAGTGTTGGGTATTGATAGTACTCTAGTAT
GAAGCCTGAACATTACCTGCCCGACATACATATTCCTGGATGTGCTCAGCACAAAGATCC
ATTTTGCGTCCCTCGGACCGCCGGAGGTGTCGAGGATTTGCCTGCTGTTCTTGTACATGA
ACTTGCCATCCTCAATCACAACCTCATAGTCCTCTCTCTCTTTCTGCAGGCACAACGAAA
ATTCAGTTTGAATCATCAGTACCGCTGACCTCACATGGGCTTGCATTTCTACTCCAGCTA
TACTATACATTTATCCCATGTACGTAAAATGTTTGCAAAAACTTACCGGTCCAAGATACT
TGATGCACTGGCTGAGAAGCTTGGACCGCGGGCACCGGTCCTCGAGGTTGATCTCCTTGC
CCTCTCCAATGTCGAGCCTAAAGAACCAAACATGGTGATGAGTCTATAAGGTACTTCAGC
ATAAAGATTCAGAAATTCCAACAACCATCATCAGTTGAGCCGTGACACTCACCAGTAGAA
GAAAGGCTCCCTGCTTTCGCACCTCAGCCAGCAGTCGTAGTAGTAGTGAAGGTTGTGGCC
GTACCGGTGACGCGGGTCAATCTGCTCGTCAGAAATTGCAGGGCTCGCATTAGCACATAC
AGTACTTTTACAAAAAAGAGAACACATCAACCTAACTGAACATTTGGCAGTTTCTCTGAG
GAAAGTACTCACAGCTTCAAGCCAGTGCTGCAATGCGAGCTTCCGAGCTTTCTCATCCTT
GGAGAGCCCCTTTCCGACCTGAAATCGCACGAAGCGTTAGCCGAATTTCACGAATGGATA
TGGCAATCATCAGAGAGATTTCTTGAAGAAGGACCGGTTAATTTCGGGAGAAGAACGTAC
TTTGGCGGCTCTGGTTCTGGCGCGCGCCCACTTGGACACGGCGGTCTCCTGCCGCTCGAT
GTCGAAGAAGGAGACGGAGCTCCGCTTGAGCAGCGCGAAGTCCAGCAGCTCCCACCAGTT
CTGCTCCACGAGCACGGCGCAGTCGGCGAGCCGGCGCCGCGTCCGGAAGCTCTTGTACAC
CTTCTGCAGCGTCACCGCCGCCGCCTCGTGCTTGGGGCTCTCCGGCGCCGGCACTCCCGC
CGCGTCCGCGAACCGCGTCCGGAGGAGCTCCCTCGGCATCGGCACCGGCACCGGCACCGG
CGCGGTGACCGCGTCGACGGCGTCGGACGTGGTGATGGGGATCTTGGGCTCCACCAGCTG
GAGCCGCTTGAAGCTGAGGGAGCCCTCGATGCGGAGCTTGCCGGAGCCAAGCGAGGCCTT
GAGGAACGTCGCCTGCTCCTCCGCCGCGACGAGGCCGCATTCGCCCGCGCCGCCGTCCTC
CTCCACGGGGCACGAGAAGAGCACGCCCATCGCGCCGCGCAAGCTCAAAGCAGAGCAAAA
CCAACCGAAGCTCGCGATTTCTCCTCGTGCCGATCCTGTTTGACCCCGCTGGATCCCACC
TCGAGGCCGGTCGTCGACGAACAAGAGCGAGTGCAGTAGAGCTGTGGTATGTCTGTATGT
ATGTATTTCTTGGTGCGAGCGAGCGAACTACCGGGCTGGCTGCAGGAGCCACTGGGCGAA
TATATAGCGGGAGGAGACCGAGCAGACCGGGCTGGCCAGTGGAGGGACGCGCGGTGAGGG
TGGGCCACCGTCGGATGCGGAAAAGCGTCGGGGGCCCCGCTCCGGAGTACCACGTGTTCA
TGGGCGGATGTCACGCGGGACGCCGGAGGTGCTGACCTGTCTCGGCTGACGGGAAGCGTG
TCCCCGGGCTGCCTTGGAGAGTTGTGCCTGACTGACTGACTGCGTGTGGTTTCACCACCG
CGTAGATCAAAAATTGAATTTCACACTGGAGAGTGCACTACTATCGCCGTGCACACGGCA
ACGCATGGAAAGGCTAAGGAGAAATTTGCGGGGAAATGTTGACGGCATCGAGACGAAAAT
TTTAGTTTTAAATTCGACCATGGACTAAGACACACGATCAATATGCACACGGTCGATTAT
CGCCAACGAAGTGGTCGTCGCCAAGTCCATGTTGCTCCGTTTCTTACGTGTATGGAAGCA
CTCACATCAAATGTGATCACAATCCAAGGCCTAGCGCAACCCTCTATCTTGATGATGACA
AAAAATACGACAAGATAGGAGAGGAATATAGACATAAATCCTAGTCACAATTAATGTTGT
ATGTAACCTCTCGTTCTTAGGTTCCCCTCTTCTCTCAGGGCCTCACCTCTAGGCATCGAG
AGGTGAGGAAAACAAAGAACTAATGTTGAAGGTTGGGTTTAGTGTTATTTTATCATGACA
TGTCTGTGTGTTCTTAACGTCAACACCTTATAGGTGATTGCAACGACACATAATAAAAAA
GTTATATGACATTCTTTCTGTCCTGGTGCAATCATTGTGGCCGACGCATCTGAAATCAAA
GAGAGAGTAGTATTCTGGCCCCGTGGATCAACAACCTTCCATTTTGTGGACCATTACGCG
ACGATTTTGGATTGTCTTGGTGATATATACAAGGTGGCCCGATCTTTCGATGAGATAGTA
CAAATTTTGTTTGTGGGGACTTTGGTGACATGTCTAAGAAGACTTTGATGATCATATTTG
ACCAAACACTTGACAATGTGTCTAAGCTAAACCAACTCTCTTATGGTTATTCATGGTGTT
GAATACGCAATCAACCTGGTAAAGAAGGTACTCCCTCCGTGCAACGAAAGGACAAGCAAT
AGTTTAATACATACAATTTGAGCTCAGACATAAATCGAAGTACTCGATTAACATGGTGGG
GCAATCACGACGAGTGTACATGAGGTCTCGCCGATTCTCGTGTCTATGGCAAACGGTAGC
AAACGCTAAAACTCAAAGTAAACTCTACATGGTGATCTATCTATGTAGGACAAAGGGGTG
GACGCATGTTCGAGGTAGCAAAAACACAATCCTAGGTCGTACCGTTGGGGAACGTCGCAT
GGGANACAAAAATTTTCCTACGCGCACGACAACCTATCATGGTGATGTCCATCGAC