Contig Data
morexGenes
Links



Map Locations of contig_2548451 (4045 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2548451

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37458 1 1020 bp MLOC_37458.1 Available Available LOC_Os06g14324.1, FRAME:+2, EVALUE:4e-78, 13106.m01580 protein caleosin related protein, putative, expressed





CDS Structure of MLOC_37458






Contig Sequence (4045 bp)

>contig_2548451 4045 assembly3_WGSMorex_rbca.fasta
AGGGCATATTTCCAACACTCCCAACACACAGAGACACGACATCAAGTTCATCACATATCA
TTTCAAGAAGGGTTCTACTTATTCTCCATCTTGGTAAACACCATTCATCATATATATAAC
TTCTAATATTGTCCTTGTGAAGAAATTCAAGTCAATCACTAGCAAACGAGAATATGAGCC
CCACCCTACCACGGGCGGTGCCCTATAAAATATAAGAGAAAATGCAGACTCAGAAAACTT
CAAAGAACCTTAAAGGATCATTGCACCCCTTTATCGAATTCCCTTGAAATTATTCTAAAA
AAATATTCTAAAATCTATGTGAGAAACTATAAGTACTTCAAGAATGTTAGCGATGATGTT
CACAGACAATACAAAAAACTCATGATTACATAGATAAATATTATCATCACAATATTGCAT
GTAGGGAATATTTCCAACAGTAGTCGTGGCCAATAGGTGGATGAGCCTTATGCTTATGGC
TCATCTTGGGTAGGCGCTCATGGCGCAAACATAATAAGGGGCACATGAGAGAGAATACAA
GGTCGGGAAATATATCCAACTTGCTTCGTTGTATTGATCGGCTATGAAGGTCTTATAAAG
CCAATTACAACTTGGAGGAAAAGAAAATAAACTCTAGTTGAATTTGGAGATAGCAGGAAA
ACCTTCTTCGGGACAAACCTTTCCATATCCAAACTCTCACTCTAAACTAGCACCAAGTTC
ATCGCATAGCACTTTGAAAAGGGTGCCATTTCTTTTCCAACTTGATAAACAGGCTTCCAT
CATATATACCTCTAACACTGTCTTTGTGAAGGAACCCAAGCCAATCGCTTGCAAGCGTGA
ATAATAGGCCCCACTCAACCTGTGGTGGTGCCCTGCAAAATATAAGAGAAACTGCAGACT
GAGATAACTTTAAAGAGTCTAAAACGATCATTGTACCCTTTACAGAATCCCTTGGAAGTT
ATTGTGAGGGAAACTATTATCAAATTTCTATGATAAATTCTGCTTCGAGAATGCCATTTC
ACCAACAATTGGCCACACTAAAAACTTACCATGATATAGGGTCTAGATCCCGTTTTGCAA
AGAGCATCACATGCATCTCCGCAAGAGTCAACGCATCTGGTCGGAGTATTGCATATGTTT
TGAATAATTCCTCAAAGTTTTGGGGAAGAAACCTATAACTTGTGACGTTAGAACATATAT
TAACTTGAATCAAGTTCAAAATGCACACATAACCTAGCATCTCATCAATAGAGTAATATA
ATAAAAAAGGGGGAGTATATCATACAGCCAATTGACAAATCCAACTCATGTATATCTAAG
AAACTACAATAGGTATTACTTATACTACTATGCATGTCTATGTATGTTCCTAAGGATTCC
ATGGCTATATAGCCATATAATTCCTTTGATTTGTAATATAAGTAGCTTAAGGCATTGATG
CGGTCTCTAAAGCATCAGTTTGACCATCATTTTTTCTAGAAAAATGTGTTGTTTCGTTTA
AAAATAATTTACACCCGTAAATTGATTTATATAATGAAAACATTTTTTCACAAATTTAAT
ATAATTTTTGCAGAAGCTACGAATATATAATATCAATTTAGTATTGTTAGTGTTGGTAAT
TATTCCTAATTTGATGGTTGGATATATAAATATTTTTCTGCCATAAATTCTAAAGTTTTT
TTTGCGATTACATAAAAAGGTTGCTTAACCGGAGGTCGTATACTATAGCGTGACAAAAGT
ACACATGTTTAATGTGGTGGGGATGTACCGGTTGTATAAAGTTCGACTCTAAATAAACAC
CAAATAGATTAACAGAAACCAAAGAAATTCAAGCTACTGCCACCACTGTTTTTTTCTTTT
ATTTTCAGTACAAGTGGCTGATTTTACTAGTTAAATGAACCCAGACAAGGACTGAGGTAA
GGCAACTGATTTCAACTACCTTCCTTTGGCATCATATACACCTGAATCACTTCCATGCAT
AGCTTTGTGGATATTCTCTACGTATATTGTCAAGTGAGGCAGTGGTGTACCAGCCTGAAA
TGAATAAGACATCATAACACATACGAGTTAGTTATCTGCAGGCCCACATGTTCCTGTATG
TGTAAGAGAGATGGGGTACCGGGGTTGTTTGAGGAGCAAGGGCACCGTGAATGGCGGCAG
AGGCAGCAGTAGCAAATGCATACTCGCAACCGATTGCAACAAACCCTGAAAAACCCAAAG
ATATGTTTAATATATATAATAAAAAAATCTAATACGTAGGACTCCAAGTGAAAATGTAGA
CAGGCTTTATCATTTGTTGCTACTCCAAAAGCTTTCAGAAAATGGTTTTGCATGTGATCT
TGGCATTTGCTGCTTGAGACCAGTTAATCCTTTCGAAAAACATTGACAAATCATAGTTAC
CCCATATATTGAGTGATACTGTGGAAAAAAAAAGGGGCAAGGTTTCTGTTAATTAACAAT
GTAACACAATAAGTATAAAGAAGTTTCAAACACACATAGCAAATCACTACTACTCCCTCC
GCCCCATAAAAAACGTTCTTATATTATGAGACGGAGGGAGTATAACAAAAAGGTGCAGTA
TTATTCACATTTACCTCTAAGTTTGTATTCTCTATATAAGATTAGAACTTCTGCTTGAGC
TTAGCTTTTGCTCATCAAGTTGCAGATGCATCATTTGAAAACCAGTGCATATGCATGAGA
TTCTACTTTTCTACTGAAGTGTAAGATTGTGTAATTCCGTCGCAAAATAAAAATAAATAA
AAATAACGAGCTTGTCTAATTTGTTGAATAAGCAGCCACCTTGGATGGTTTCTGTAGGAG
TGATGAAGCCATCCTTGTTCCGGTCGAAAAAGGAGACATGTTTCTGAAGCTCCGTCATGT
TTGCAGGATCAAACTTGGCCACGGCATGCCCCCCTTATACAAAGATAACAGTAACAGCTA
TCAAGCCTGGAAGTTCTCGTGATAATTCTACTCTACAGGAAACAAATCTAGTTGGCTGCA
GGCTGCAGGTGCATCGGGGACTTACAGTTCCAGCTAAAGATCCACAGAAGCAGAAGAGAT
GGTAGCTTCAGAGAAGCCGCTGCCAGCGATTGTCGATGACCGGGCATTGTCGCCTGTAGC
TATGATCCTGAGTGTACGGCTCTGAGATGCAACGCATGGCCCTGTTTAAATAGACCCGTG
AAGAGCAGGCTGACAACTTGCGGAGCGTGGAACACACCAGCGCCGAGACGCTCCGAAAGA
AAACGAAACAGAGCTTGTCGAGCACCGCAACATGTCTGACGGTGGAATGCAGATGCAGAC
TACTAACTTGTATTGCACCTTGGATTAGTGGGCCAAAGCTGTTCGGGAAATCGAGGGTGC
AAACAAAACTGCTGTAGATTGCGGGCATTCTTGGTGTGAATGGTCATGGCTGCTTAAAGG
TTACAGATTGGTTTCGTGAGTGGCTCTGAATCGCACATTCTGAATCTACAGTATGTGACC
TGTTTATAAGGAAATCGAGAATACTGCTATGATTGGTAATGCTCATCAGCCCGATTGCAA
TCTGAGTCGGGGATTCCGAGGGAGCGGCGGGGTGGGAAGATGCGTGCAGGCGGAGTTAGC
AGCGGCTCTCCGGCTGCCGGTTGCCTCGCCCGGTCGACATGATGGTCGCTGCATCGCGTG
GCCGCCAACCGCTACATCGCGTGGCCTCCTGTGGGCGACGTGGAGATGTGGACAGATGTG
AATTTGACCTCGGATTTGTCGGATAGCACACGCATCCCACATAAATTTGTCGCAATTCGA
CATGTGTCCAAGAACATGGTTTTCTTAGCCTCGTTGTAACGGGTACTGTCATATGGAGTA
TATTACTATCATGCATATCTATGTCTTTCTCTTCTCTAATAATAAAAAGACTATTGTTTC
CGTCGAAAAACCCACTGCGACAATTTTATAAAAAAAACCTATAATTTTTTTATTCAACCA
GCGCTTCATCATTTATCTGCAACGCAAAAGGAAAAACGATTCGCTCTGCAACGCAAAGGG
AAAAACGATTCGCTGCAAAAATTAT