Contig Data
morexGenes
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Map Locations of contig_2548394 (4665 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548394

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37433 2 1909 bp MLOC_37433.1 Available Available LOC_Os01g57630.3, FRAME:+3, EVALUE:8e-167, 13101.m06117 protein pentatricopeptide containing protein, putative, expressed





CDS Structure of MLOC_37433






Contig Sequence (4665 bp)

>contig_2548394 4665 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCGCCGCTACCGCCGCCTCCACCCGGGCGAACAGCCTCTCCCGTATCTTCT
CCTCCTCCTCGCCAGTCATAAGCCCACCCAAGCGCAGTCCCAAGACCAAACGCGCGCCGA
CGCCGCCGACGCCGACGCGCCGAAACCGCCGCCCGCCGCCGATGCCGGCTCCATCGCGGA
CGAGAAGCCCCCGAAGCCCGTCGGCGCACAGCCCGCCGCCAAAGCTGAGTCCAACGCCAA
GCACAAGCTCCCGAAGCCCCTTGGCATCATCCTCAAGGCCCTCATCCGGCAGCGCGACCC
TGATAAGCTGGTCTCTGACTTCGTCCAAGCGTCAACCGTGTCGTCGCGCTTCCGCGACCG
GCACCGCGTGTTCGAGGTGGCGGTGAGCCGGCTCAATTCCCTCGGCCGCCAAGACGGCAT
CGAGGCCATCATCGAAGCGCAGATGCCCTTCCTCGAGACCTCAGCCGAGGGATTCGCCGC
GCGCCTCATCCGCCTCTACGGCCGTGCCTCCATGCCATCCCACGCGGCCGCAACCTTCCA
TAAGCTTCCAGCGCAGCATAAATCCACCATGACCTTCAACTCCGTTCTTTCCGCGTACGC
CGATGCCGGAGATTTTGACGGGCTCACTGCTGCATTCCAGGAGATCCCAGCCACCCACCC
CTCGATTGTTCCCACCGTATACTCTTACAACGTACTCATCCACGCATTGTGCCAGAAGCC
CGACATCTCAGCTGCTCTCGACGCTGTCCATCTCATGGAGAAGCACGGTATTCCACCTGA
CATTATTACCTTCAACACGCTATTGAATGGGTTTTGCAACAATGGCCGCGTGCATGAAGC
AGAGACAGTATGGGAGATGATCAAGGAGAGGAATTTAGAGCCAGACGCCAAGTGCTACAA
TGCCAAGCTGCGGGGTTTGGTTGCAGAAGGGAGGATTGATGATGCAGCTGCTGTGCTTGA
GAGGTTGGAGAAGGACGGACCAAAACCTGATACAGTATCCTACAATGAGTTGATTCGAGG
ATATTGCAAAGCCGGGAGGTTACAGGAGGCCAAGAAGCTGTATGATGATTTGGTAAAAAA
TGAGTGCACCCCAAATAAGGGAACATATGAGACTCTCCTGCCACAGCTTCTGCAGGCTGG
AGAGCTGGATTGTGCATTGACGTACTGTTATAAAATCTTTAGTGATAAAAGGAACCTTAG
AGTGGAGTGTGGTGTGCTGCAGGATGTAGTGAATGCTTTGGTAGATGTATCAAGGGTGGA
GGAGGCTGCCAAGATTGTTGTGCTCGGGCGGAAGAAGTACTACCCCCGAAAGGGTTTGAG
GATGCCTGATAGGACAAAAGACAGTGAATTAAGAGCTGAAACTGATGAGGAAGAAGCAAT
ATCAGAAGAAGAGGAGTGTGAAGTGGAGCATGAGACTGAAAAATAAAATTCGTAGGTCAG
GCTTTTACTGATGCATGCCAAATTTCACCATGGCCTGTTTTACTCAGTTCCTCTGTTAGC
ATGATAGAACAAAAAGTGCAAGTTAAAGTAGTGGTTAAACTAGTTTAATAAGGTATTAGT
TAAGCTTGCCCTGTGCTGTGATACTTATTGAAAATCTTTCTATTCGTTTTAGAAGAGATC
CACAGAAGTCTTTATTCTTATCTGCAATGACTTGCTTGTGCTGATTTTCCTCGTTGCATC
AATTTATCTGTATGGATCTAATATTTGTGTTTGGAAACATCCTCCAAAAGTTGTTTACTT
TATGGGTACTTGTACTTTCTGGACATTGATGATTCAACTGTTAGCTCTGCGATGAAGATA
AACACATACCTCCCACTTTTTTCGATTCTTATTGTTTATTTTATTATTTCTCTTTGAAGC
ATGGACAATGCAAATGTTATGACATACATGAAGTTAAAAGGCCTTTGATCAATGATCAGC
TTCGATAGTAGTTTGTCAGGTTACTAGTTTGCCAAACTAGAGGTGAATAGTTGTAGCTCC
ATTCCAGAATGGATTCGTTGCATCGTCATGTACTCCCCTCGGATCCATATTAGTTGTCGC
TGAAATGGATGTATCTAGACGTATTTCAGTGCTAGATACATCCATTCGAGCACAACTATT
ATGAATCGGAAGGAGTCTTTTCCTTTTTTTGACCGATGTTCATATTTGATCATATAATGA
GTTAGTAGAGTTGTAAACCAAACAAGGAAGAACTGTATGAATTAGGATAGTAGGTGAAGC
AGACTAAGGCATTGCCTAGTGGTGGAAAGGGGTTGATGACTTTCCACCCACCCAGGTTCA
AGGCATGTTACTTGCAATTTGGGTTTGTTGCACCAATTGTACTTTAGGGGCCTCCCTTAC
AGTCTTTCTGTCAAAAAAAAAAAAGGGATAGTAGGTGAACTAATGATTTCTCACAATTCA
GATTCTTGCTTCCTAAGAAGATGGTAGGAGCGGACCAGAAGTGCTATTATGAGGTAGTAG
AGTTGTAAACCAAACAAGGAAGAAATGTATGAATTAGGATAGTAGGTGAACTAGTGATTT
GTCACAGTTCAGATTCTTGCTTCCTAAGAAGATGGTAGGAGCCGACCTCCTTTAATTGTT
AGGAAATTGGCTTCAGTATGATACCGCTAGGCTTTGAGACTACCATCAAAATTCTTCCGA
GAGTTCAAACTATGAAATTAAGTATGTACTAGTCAACTAAATAATTGTTTTGTGGTTATA
TCAAAATACACCAGTGTTGTCAAATGTTAGGACTAGACTCATGTATGAAGTACTCCCTCT
GTAAAGGAATATAGAGGGAGTAAGTATTACCTGTACAACTCCGCCAATGTTACTCTTTGT
GCATTTCATCTAATTAGAGGTAGTGAGCCACCCCAGGTTTAAGCCTTGGTGGTTTGACTG
GTCGATGCGGCACCTTATTGACCGACCAGTGCTCGTTACTGTGCTGTCCATTTGCTCGTG
TCAAGCTTAGCATATCTGGCAGCAGATTGTTACTTTCTGTGTGCTGTTCAGGTGGATGAT
CAAGCTTCGCATATCTGGTAGCAGATTCTTACTTTCTGTGTGCTGTCCAGGTGGATGATC
ATCCTTATTAGACAAACTATTTGGCAGTCGCACCTCTCTTTCTATACGAGCAATGGAAGT
ATTTCCACCATTCCTCTGATCCCTAATGAGGCGTATCTTTGTCCCCTGAAACTCCTGGAG
CGCAGGCTATGTTCATTTTTCATTTTTGTCATCTGGCTTTATCAACAATGGAAGACACTA
TGAGAACATATCAGCCGCCTTGTTATTCAGGCCTTCCGCAGGTCAGTTTCCTGATGTTGA
TGTACAAAGCTTGCTTCTTACTGAAGCTATGAGAGCATATCGAACATTAAGGCCATTTAT
TGGTCAGTTTCCTGATGTACTGCTCTTCTGCTCTTACAGTTTGTTATCTTTGATAGTTAA
TCATTTCTAATTGGTGTCATATATAAACTGTACCTTGTTCCCTGGTTTATTCTGTGAGCT
CATTGCTCTCGTATTACCATTTTTCAAATAAAGGGTCTCCCCCCAGTTTTCATTTCTGAA
AATTGATAAGGCGATTTATTGGTCATATGGTACGGTTTTCTTTAGATAAACTGTCATCTG
GTAGGTTGATTGCATATCTGCATGCAGGAACCCTTGGGTTTTCTCTTGCTTAGTGCAGTG
CTGAACAGCTACACTGTTGTTCTGGCATGCATGTTAATGAACATCTGAGGGGGGTGCAGT
TTACAAGCCAATGGAGGCCAAAAACACGGTTCTGGCCTTCGTAGCAAACATCAGCACAAA
ATGAATCTGGTTTGAAAAAAAATCACGATATAACCCTTTTTAAAACGCCACAAGCCGTGG
CATTGTTGCCCCATTATAAAACGCCGCTCTATTTTGGCGTTGCCGACCACCACCGACACG
CCAGTCTTGTGTGGCGTTTCTTCTTCCTTGCAACGTCATCATCTCTGGCGTTTTCACTTA
CAGCTGCAACGCCATGGGCCATGGCGGCATTGCTGCCCCACTATAAAACGCCGCTCTATT
TTGGCGTTGCCGGCCACCACCGACACGCCAGTCCCATGGGCCATGGCGTTTCTGTCTGAC
ATATTTATTAGGGGGCACCCTCCACTCACCACTCACTCTCTTCTTCCATCACTCTCTTAT
CTCCCGAGCTGCAACCCCTTTTCCCCCACTTCTCCCCTCTCAAATCCTTTCAAANNNNNN
NNNTTGGTCCGTGGATCCGGTATCATTTCCGTTGCTTGAGGTTATCTCCTTCATCTCACA
AATTTTTATTGGTTAGAATTGTCTATTTGGATGGTTTTTTGCTCATGTGTTTCTAGCCCT
AATAATGAGTATAGTTGTTCCAATAATGAGTATAGATGTTCTTAGTTTATCTACTAATGA
GTATAGTTGTTCCAATTATGTTACATTGTATTGGTTGGATTATGCTTATTGTTAAGATTT
AGGGTTAGGGTTAGGGTTTGGGTAATGCTTAATTTGGATTGACATAGATGTTTCTTAGTT
ATTTTGTTACGAATGTGCTATACTTAGCATTGGTAATTTTGTTCCCTTTTTNNNNNGGAC
AAGATTGTGAATATTCATTATGTTGACAAAGAGACATTCATGAATGTTGATATTGTTGAC
AAGTATGAGGAAGTGTGGACATTTCTTGAGAGTCCTACTTATGAA