Contig Data
morexGenes
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Map Locations of contig_2548376 (2307 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548376

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37426 2 863 bp MLOC_37426.1 Available Available LOC_Os02g27769.1, FRAME:+3, EVALUE:9e-32, 13102.m03030 protein 40S ribosomal protein S27, putative, expressed





CDS Structure of MLOC_37426






Contig Sequence (2307 bp)

>contig_2548376 2307 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCGCCGCCGCCTAGGATTGTCGCTGCCGGACACCAGAGAGCGCGGTTCCCGA
GCAAGCCCTAGCCTCCCACGATGGTGCTGCAGAACGACATCGACCTGCTGAACCCGCCGG
CGGAGCTCGAGAAGCTCAAGCACAAGAAGAAGCGCCTCGTCCAGTCCCCCAACTCCTTCT
TCATGGTAAAACAGTCCCCTTGGAATCTTCTCTTGTGCGTCTTCTTTTAGGCACCATTCT
CATCGGTGTTCGTACAGCGTGTAGTGTACAGTAGAAAACATGTCGCCTTTTCGTTGCCTA
GATTTTTCATCTGATTTGGAAGAATTCTGCTTCGGCAGGCTGTTGGTGTAGCCTGTCATT
AGTCTTGGCTGAGCGTGTTTTTCTGTGATCAGTCTTGAATCATGCCTTAGTTCTGTCAAA
TATATGTACCCTTGCATATATGTCAACCAATCTTCTAGGTATCCGAAAATCTCTAGGCTA
GTAGCGAACAGTATATTGCTGTTCTGATCTGAGTTGTTTTTGTGGATCCAGCGAATCATG
TCTCCTACTGCACATTCCCGTGTAACTTAGTTCCCCCACTTATCATGTAAACTGCTTATT
ATCTTTTTGTTATTATGCTTAAGTTTGACATTTTTGTTTTTGTTTTGTTTGGATTATAGT
GGTTCTAACTAATGGTCATGTGTTGACTTTTTCAGGACGTCAAGTGCCAGGGCTGCTTCA
ACATGTAATTCTTCTTCACATTTTGTGTTATTTGCAAGTGCATAGTTCAGTAGGTTCGTT
TGCTACTGATTAGCCTTGGATGTTCATTTGATAACAAGGCATCATCATTCTCTAAAAACG
TTCTTGCTATTTTTTTTGTAAGTAAATTGGTAATGTGACTGGGCTGCCATGTACACATGT
GCATAGTCTGTTGTACAGCTTTGTGTTTTTGTGATTTGGTACTGTTTTCTGTCACAGCAT
ATGCTCTATAGGTTAATATAGAAAGGATGAAGATGCATTTTCCAAACATGATTTTGTGTG
TTTTGGTAAACAAGCCATGTAACACGCTAGTTCAAATATAATCCTTTTAAGTCACTGTGT
TCCTACTGCTGTAATTGTTCGACAACTGTATGTTGAATCATCAGTCTCCCCTGCCATTTT
ACAAAGTTATCTCAAGTACTTAAATAGGCAATAGGTTTATACACCACATACATATCATTT
TTCATCTCATTTGGACCATAGTCTGCTTGCACTGATTTACTTTGTTTTGATGTTTGTAGA
TCATGCTTTTACTTTAACATGCTCTTTGGTTACGCCCCATATTTTTTGTGTGTGGTGTAT
CGCTGAACTGTTCTTTTCTGTGATTGCAGCACTACTGTGTTCAGCCATTCCCAGACTGTT
GTGGTGTGCCCAGGCTGCCAGACGGTGCTCTGCCAGCCAACGGGTGGCAAGGCCAGGCTA
ACCGAGGGTTGCTCCTTCCGTCGCAAGGGCGACTAAACCTGAGGCCAACTGGAAAAGCAA
GCCGTTATTGAACTGAGGTTTTTTCAAGGGTGTTGGTCTGAAAATTTTGCAATGTCGGCA
AAGTGAACCCATCTTTGGTAATTTGATATCTAGCTGAAGCAATATTATGACACTGTACTA
TGTTCAGTTTGGGTTGTGAGATCAGACTAGTAGTACCTGGCAATATATGTGGTTGTCTTT
GATGAGTTTTTATTCCTTCTCATGTTGCTTGTCCTCTCTGGTATGACTTTGAATCATTTG
TTGCTTGCATTTTCTATTTCTGTGTGTTGCATTATTTCTTGCCTCTTTGATGGTAAGTTG
AACTCCAATGATAACATCAAAACACCCCTAAAGCGGAGGCTGGAAGCGGAATGGAAGTAC
AACCCTGTGGCATGTATTTGGTTGGAGGCGGTATAATACAGGTGTAAAATGTTACAGGGT
GACAGAAAAACAACATTTCAAATGGGGCCAAGTGCCTCGATGTAACGCCTGTAAATGTCA
TATGTTTGTCTGCTGAGACTGGTGATGCAGGAATGCAGATTATATACCCAACAATGTTCA
GGAAAAGGGCAAAACCCCGATACAAGGGTAACCAGCCCAATAACGTGCAAAACATGTAGG
CTATGACCATGCATACCCAAAAACAAAAGAGCTCTGAATTTTAAGATGTACTCCCTCCGT
TCCTNNNNNNAAGTCTTTTTAGAGGTTCAACTAATGGACTACATNNNNNNNNNNNNAGAC
ATACTTTAGAGTATATATTCATTTATTTTGCTCCGTATGTAGACATCTAGTGAAATATTT
TAAAAGACTTGTATTTAGGTACGGAGG