Contig Data
morexGenes
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Map Locations of contig_2548366 (3312 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2548366

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37421 1 860 bp AK251381.1 Available Available None
MLOC_37420 3 1136 bp MLOC_37420.1 Available Available LOC_Os05g51690.3, FRAME:+3, EVALUE:2e-40, 13105.m05586 protein CCT motif family protein, expressed





CDS Structure of MLOC_37421






CDS Structure of MLOC_37420






Contig Sequence (3312 bp)

>contig_2548366 3312 assembly3_WGSMorex_rbca.fasta
AGGTATGAATCATCAGTTCCTTTCTCTCCCTCTCTGTTGCACTGCACAACACAACACAAC
ATTGAAATGGAATTATTGTGACAAGCACCACTGACCTTTTCGTGAGCACAGCTGTCGACA
AAAGACACGATAAGTACAGAAAAACAAACCTAAAAGGCGTCGCTTTCTCATGGCATTCGA
CAAAACCTCACTGTACATGTGCTAAAATGGTCTAGTGCTTTGCTCAACATGAAAAGGCCA
TTCCGTTCCGTTATACCATTCCTAGATAAAAGCTATGATATGAAGGAGAAGCACTAGCTT
AGCTAGCTGGTGATGTGATTTCAGAGGTTACTAATTCTGCCCAAAGTCACCTTTCCCTTA
ACGGCCTCCTCGATGCTTTAGCTGATATCACAGGGCATATATACCTACCTTGCACACTCA
GCACTTTTCAAGTTGCTTAGATTTTTCGACACGCAAGATACATACTAGCAAACACACGCA
AAGTATAGATAAATGACATGTTATCCTTTTAGGTAGGATCATCATGTAAAGTCCAATTTT
TGTATGAGGTACTGCAATTTGCAAGGCTAATAACATGTTTACCTCTTTTCTGACAGAACC
TTGGTGCCAATAATACCCCTCGGCCTGGGATCGCAGGGAACATGCACGCATCTGGTGAGA
GGCTTGTGACCATCAGTGACCTGAAAAGTGAGGAGAGGAAGCAGAAGCTCTCCAGGTACA
GGAAGAAGAAGATCAAGAGGAACTTTGGCAGGAAGATCAAGGTACATAAACAAATCTCTT
CTTCTACTAGCACACAAGTAATTCAGCAAGAACATGGAAGACTGATACATGTTTTCGATT
CTGTTTTTTTGCAGTATGCTTGCAGGAAGGCTCTAGCAGACAGCCAGCCGAGGGTGCGAG
GGAGGTTCGCCAAGATGGACGATGGCGACATGCTCAAGCCGAGGAAGTAGGACGGCCATG
GAAGACCGCCTGCTGCCAAACTCATGAGGAAGACAAGGTTGTTGCAAGGAAGGAATTGAG
CTACTGCTGAGCTGCCAGTGGCTTGTCTGCGTCTAGAAGCTTCTAGGGCAATGGCCGCTG
TGCTGCGCCGCGCCGCCCATTGGAATTCGTTTTCGCTCGCTCCATCAAATCCGTTCCTTT
GGGTGACATTTTCTATTTTCCGTGTTCGTTTGTAATAATATGATGGTCCTCCCAGTGGTG
GTGCAAGAGAGTGGAGAGCCCTAGCTAGGCAGCCAGGCTCCTCTGTGTACAAAGGCTTGA
ACTTGAACTTGGACTTGGTACTAATAAATAAATAAAACCCAGGCTCCTCTCTTGCTTGCC
ATGTAATAATGTGTTGTCATTGCTATTTTAATCTTGCTACTTATTGCTAGTTGCTGAAAT
AGAAATAGATGTAGTATCTAGACAGACATATTTCAGTGCTAGATACATCTGTTTGAAGTA
GTAGTACTCTTTCTTTTGATGGTTGGTTTATCAGGTGTTTGCTGTCAAGAAGAAGAGAGT
TTTCTCTGCTGTCTCCACCCAAAACAAATTGACCTATCACTTTCAAAGCAAAACTAGCAT
TACAAAACTCTTTCCTTTTTTTGTCGACAAGCTTTCTCAAGTTTCTAAGGTCCACTTTAC
GACATCGCTACTTGTCTATTACGAAACTTCTATAGAAAATTAGCGAAAATGCATAAAAGT
AGGTCCAAACTCAGCCTAGAACTGTCTACATTTCCTGTCATTATTGCAAGCACAAGTTAA
TGTAAAATTCCACCAAACAACATGACAATCAAGTCTTTCAAGACTTTGAAAGGTGAAAGC
GTCGGCTAAACCTCGTCTGGCCCCTCAAAAAGCATCTCGCAATCAATCACACACCACAAA
AGAACGAAAACAAAATTAAAATGGACATCCAGCTACAATGACGATGAAGAGTGCGGAGAA
TGCAGGCCTGAATTGGAGAACACATCAAAACAAACAAACAAACATCCATCAAAATCAAGT
GCCTGAAGGCGACGGTTTGATTTAAACATCCACGGTTGCTCGGTGCACGCTCTATAACAC
TCAACGGTACAAACTCTTTAAATTTCTGCGGTCCTTATTGCATCAGAATGAGACAAGGGC
AAGCGACACCGACTGAAAGGTCGCCCGAGCTGTGGTGTTATTACACTGTGCCATGGTCTA
GAGGCGATTATGGAAAGGGACTGGAGCTTCTTTGGCTCTTCTGAAGACAATCGATGCAGC
AGTTAGTTCACACCATAGATCCACTTCTCCTCATTGCTGGTGTAAGAGACGAGCTCCTTG
GGTTGGAACCAGAGTGCGATCTCGTCCTTGGCCGTCTCCGGGCCATCGCTCCCGTGGATG
ATGTTTCTGATGTTCAGAGGACGGAACGGAATGAATGTGAGCACAAAGGAATTATTCTGG
GAGTGCATCATGGCATTCAAGAAATGCGGAACCAAACCTACATCAGGTCTTTCTTTTTTT
TGTTTCAATCTGTCTATTCTAAAACACTGAAGCTAAGCAGTAATGAGCGCAAATAATGGA
TGATTAGATGTATGGGCAGACAAGGTTGATGTGGCGGCGGACTTTTCTAAATGAGGGCAA
ATAATGAATGGATCATCGCTATCTGGGCCTACTGAAGATAGAACGAGGCATACCTTCCAA
CAACAACAGCAAGGTCTCCCCTGATGGTTCCTGGCTCAGATTTCTGTGGGTCCGTGGCAC
CAATCAGCTTCCTACCGTACTTGATAACACCTTCTCCTTCCCAGACCTTCAGAATATGGA
ACGGATTAATAAACTGCAACTTGGCAGCAAACACAGGGTTATTTGTCTACGGACAAAAGA
TGGGAGGATTTGATTACCATGGCAAGCACGGGACCGGAGCTGAGGAAGTCACACAGTCCA
CTGAAGAAAGGTCTTTCCTTCAGATCATGGTAGTGCTTCTCGGCGAACTGCTTGGATGGA
ACCACCAGCTTGATGGCAACAAGCTTGTATCCTTTTCTCTCAAATCGGGACACTATCTCA
GAAATCTGTTGCCAGAGAGAAAAGATACAGACACATCCATCATTTTTTTTTTTCAAAACT
GAGAGACATCCATCATGATACAGTAGGGAATTAAAGAACATGCATATGGAGAGAACACTT
TTTGTATCTAAAAAATCAGGGGTATTTCCCTGGCCCTGTTCATAGGATGAAACCAGATGT
CACAGCTCTTGTTGGTTAACAGCCCTATGGCAAAGGATAAAAGAGGTTTGAAACAAACTG
TGACCCCCACTGCATAACAGCAATATCTGGGTACTGAACATCTAACATGGGCCCGGGGGG
GGGGGGGGGGGG