Contig Data
morexGenes
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Map Locations of contig_2548322 (5875 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2548322

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37399 1 2407 bp MLOC_37399.1 Available Available LOC_Os03g44500.1, FRAME:-2, EVALUE:0.0, 13103.m04788 protein serine/threonine protein phosphatase, putative, expressed
MLOC_37398 1 297 bp None Available Available None





CDS Structure of MLOC_37399






CDS Structure of MLOC_37398






Contig Sequence (5875 bp)

>contig_2548322 5875 assembly3_WGSMorex_rbca.fasta
AAAATGGCAGATCTCTGTCATCATTGTATCAAGAATCTCATTTTCTTCAAACAGAATTTA
GCATGGTGGCATGTATGCCAACCGCTGGCAAATGTGCCAGCATGAACTGCATGGTGGTTT
AATATAGGCTGGCAATGTATGTCGACCGCTGGCATAGTGCCGGCGTGAACTCTTGGGCGT
TGACATGTTGGCATGTTTTATCTAAATGCCCGAACATAAAATGTGTCGTGTTGGCATGTT
TTATCTAAATGCCCGGACATAAAATGTGTCGCCAGCGTTGGACGCTTGGCCAACCAAAAA
AGAAAAGCGGGTGGACACGGGGCAGGCGACCGACCCAAACGGATAAAAAACAGACAAAAA
CACCGTCCGTTTGGGTCAACCGGCGGCGCTGAAGCATGCCCTTACTGTTGAGATGATCCA
CAATTAACCATGCAAAAAATCTTAATTTTAAGTGTGCAGCTAGATCTCCAAATCTAATTC
AAAAAGGGATTGGAAAGAAATAGGCTCATGAACAAGTAAATAATAATTCATGGAGAATAA
ACCCCATCATGAGATCTCCATCTCCAAGTACCCTAGTTTTCCTGACCAAAGAGATGCTCA
ATGAACAATAGCTGCAAAGTCTGAAACTAAGATACGGATTTCAGGAATATGTTGGGCTAC
CAAGAGAAAAGTAGTATACTGTGAGAACAGCATTCAGCGCAGCTAAGACCATAGAATGAA
CTTTATAGATCATCCCCATAATCGAAAGACTTTGTGTACTTCAGAACGAGAAAAAAAGAA
CCAGAGAAATCAGAGTACAAAGGACTTAGTAAATGGTATTTCATACACATCCAAAACAAC
GAAGTGACACCCCTTTTGCCTCCAATAAATCAAATCACGACTCCCATTCAACGGCCAAAA
CTTCAAACACAAAAATTGTACACATCAGCGGCAGGCTGAAATTACAGTGGGCATGCCGGG
ACAAAAGTAGCAGGCAGAGCTATTATACACGACTAGAGCAGGATCCAGTCCCTGTGGCAA
CTCAACAACACCTTTGCAAAATGAGAACCCTAGACCCCCACCCCCAAAAGGGAACAGAAA
GAATACCTAGTACAATAACACTATTTCCTTTTTGCCATTCCAATTGGAAGCAAAAAATAA
ACACATACAACCCCATTATATCCACCGGCAAGCTGAGTATATACAAGTGAAGCCTCAGCG
GATCTTCAGAGAATCTCTGAGTTGATATGCCATACTTCTCATGCTAGGGAAACGGCTTGG
AGAGCTCATACTTAGCGCTGTCCTAGATGAAGTTACATTCCTCATCTTTGTAGTGACTTC
CACTTTCTTGTAGACGATTCTATTTTGGCATGGCTGTGGGCTAAACGCCAGTCTCTCGAA
CATAAATCATTTTCATGTGCAGAGAAGGGGCAAGATTCCGCTGAGTAAGACTTCAGATGG
ATCATATCAACCAATGTCTGATGAAAGCTACTATATCCACGCAAGAGCACCTCGATCATT
TGCCGCTGCTTGGGGACGCCCCCTGGTTGGAGTTGCTGGCCTGTTTGCATTCAGCTCCTG
AATGCCATTTAACATAGTCAGCACATGGGCCAAAACAATATGGCTAGTTATAATAAAGAA
ATGCCTTTCCAACAAAATAGTATTTTACCTGCATCCATGTATCTTCAATCTGATCTGGTG
AGGTCTCAGGTGATGTGATTGCAGGAGGCAAAGGATGTATTAGTTTTGGAACAACGACAA
GATCTCTACCCAAAACTAAGATTGCACCAGCATTGTTTGCAGTACCTGTGTGTGTACCAT
GCAAATCTATCACAAACTGAGCCAAGAGAATAAGACTAAATATTGTTAAATCATATTTCT
CACCGCAATAATTTGTTGCTGAGAAAAGAGTGATCAGGTGGCCTTGAGCAAAGCGCTCAA
AGCCATCCATCACGCACTCATGCGCTCGTACAATTAACTGAAGGTCATTGTTGTTGCAGA
ACTCCATAACACGATCAGGCTGTGTGAACAACACGTGTTAGCTTCAGAAATCGAAGGGGA
CAAAGGAAAGGGAAGATGAATTCATCAATATAGGGAATAGGGAGTACTAACCCCAAATGT
AACAAGACCAGGCCCCCGAGCATTTGGTCTTAACCCCTCAACGCTATCATTTTCTGTTGG
ATCAGACCTGTACGCATCAAGCAAGATCATGGATCAACAAAACACCCCAGCAAAGAGTAA
ATATAAGTGTGAGTTGTTGTAATGCTGACCATAGAAGATCCATGAGGACAACCGAGCCTG
CTTCCATAGTAATTGGTCTTTGAAGATTCTCGATCTGCTCTACATGGTTGATTGAGCGAC
CGATGCCACCATGCATACAGATAATTTTCTTTTCTATGAGTGCAGCCAAAGGAAGCCAGT
TAAATAACCTATTCATACGATGCCATGTCCAGATGCCATCTCTCTCGCCCTATATTTTTA
ACAAAGAATACCCGTGTTAAAAAAGATGAAAGGTGATATTGAACGAAATACATACAGTAT
ACAAAGAAAAGGTTACCATTCGCTCTATACACTCTATTCGAAAGCCAAATAAAGCGTTAA
TGTCAGCAGCCTCATGATTTCCACGAATTAAATGTACGTTTTGCGGATATTCAACCTGAA
ATGTACAATTATTCAGATATTTCTATTTACAAAAATACTCCCTCCATTCGGAAATAATGA
ACTAAAACAGCGTCACGTATTTCCGAACGGAGGGAGTAGCATAGAAGAAACAAGTCTAAA
ATCACATGCAATAAGGTGCCGGTTACTACCTTCAAAGCAAGAAGAAGGGACATAGTTTCT
AAACTGTGCTGCCCACGATCCACATAATCACCCAAGAAGAGATAATCAATGTACCTACAG
GTTAAGACAAGACAATAAGCGAGCTGAAGATGACTAAAGTACCCCCTCTAAACTACATGT
CCAACACACTTAGGGACAATGATATTTGTTACAGACAGAGCCACAGCAAACAAAACTAAT
TCTGGATCGGGGTAAAAATTCAACGGATGAAGTATCTAGAGATTAGTATACTGACGAAAT
ATATTAGATATGGTATTTCCCCCAACAAAAAGATATGGCATCAAAATTTCTCATGCAGTT
TCAGCATATCAAAAGGCACCATAACTACTGGCAAAAAAAAAATGAGAAGTGACATCTTTA
TCACTCAAAAGCAAGAACTTACGCGATGTCTCCAGCCGTTGAAGGAGAACCATACTCATC
AAACAATCGCATAAGGTCACCAAATTGACCATGTAAATCACCAAATATTTTAATCGGAGC
TTTAAGTTGCAAAACACTTGGTTCACTTGAAAATATTCTCTCGGCACTGTCACACAGATC
TGCAATCTCATTGCAGTCCAAGAAGAACTGCCTTCGCACTGGAGGCTTCCAGCCGCGAGG
TTTCAACAGAGCTGCGATCACCTGGATATGTATAGCAGCAGACAGAACAAAAAGTGAATA
TACAGATGACAGCAAGAACAGTAAGTATCACAGCCAATGCCCATAATGAGAATTGATACT
TCTACATCACTAAGGCTCATTACCATAGCGAATAAGCTACCAGATATTTATTTATTTTTG
TGCATAGATGCCTAGCTTTAGATTTAACACACATTAGTTTTGTTTCAATTGTGACCATAT
TTTGGATATGAACGGTACCTTTTTAGGAATACTATTAATGGACATCTGGCGGTCAAGCAA
CTTCCTTGCAGCAGTTGCATTCTCAGGGGTGCCATAGCTGACCCTTCTTCCTTCATTTTC
AAACTGGTCAATTGAAAGCTGTCTGACCATGCCACCTAAGGCACCTCCAGTTTCTGCAGC
CACTACCACCTGTAATAAGAAAAAAGAGCATGTCACCTGATGTAATGCAAAAACAGCTTT
AGCTATGCAGCTAACAAGGTGAGGACTCCCAAATATATTAGTGCACTGGCATGATATAAA
ATAAACTGCCAAATAAACAAATGGACTACAAATGATACAACAAAATGCAACACATGGTCT
ATTCAGTACTCACAGCTCTATGGTGCAACCGAACACCAGGTGGAGGCGTCATGTTTGAAA
GAGCAGTGTCTGGTTTGATGAGGCTTGAATGTTTGTTGCTTGATGAAGAATCTGGAGACT
GCTCCTTGTCAGACAACTCTTCTGCCTCACCATTAACTTGCCTAGCCTTTACAGCAGCTA
AAGTAGCACTAATTGCCTCTGCCTCTGCTGCTGATGCTTCAACTAAGTAATCAACACCTT
TGCTTGATCTCCTGTGAAGTAATTAATTTCAAAACAAAAAAAATCACTGTAAAATAACAA
TAAGGAAACAGATGCCAACTTGCTACTGAAAGATCACAGAACACACTTATGAAACAAATG
GAGTGTACCTCTGTCCCTGCAGCACGGCGTTCTCAGGGCTAATATCAGTATACATGTCCC
CATTAAGAGGAGGAGCAACTGGTGTTCCAAGAACTACAGATCCATCTGGAGCTGATTCTG
AAGCTGCCTGTTTAGTACGTTCATCACTGTAAGCATATCTTCCAGATGCCTTTCCAGCTT
GTGTGTCAGTGGCTGCTGCACTTGCCGCTGCGTGATTAGCAGCAGTTGTCGTTTCTGCGG
CAGCAAGATCTTCAGCCACAAGAAGATCATCTAGCAATACACCTACATTGGTAATCCCAC
ATTGTTAGCAATAAAATAGGTAAAGGCGATAGCATTAAACTGTTTCTAAATATAAAACGG
TTTGGCAGTTTAAATTGAACGACCAAAATGTCTTGTATTTAGGAACAGAGGGTGCACAAA
ATAATAGAAGTATAAAATGCGGTCAATTATTCTCAACAGGCAAATATAATACTTTATACA
ACTGAAACCATATAAATTATTGTACATATTAAAGTTTTTTTTTAGGGCTCAGACAAAGGA
ATAAGGAGTATGACAATGCTACTAATGTGAACTGCCAACAAAATTCACCTCAGACCCCAA
AGAATATGTACGACAGACAGAATTAGTGGCCAGTCATTCCTAATGTACTCTCAGGACAGA
ACTAATGGACTAGTGGTGTATATCCCATTAAGGGAAAGCAAATGAGACAAAATGACATAG
CAAGATGAATCAAAATGAATGACACCTTTTTGGACATTGCATACTGGGGACAACCAGTCC
ACGGCATCTATTAACCATACAATGAATTTGATAACTCACAGGGATGAACGATAATATTGT
AAGTATCATTCACATAGAACATACAACCATCGTAGAAGTATCAAATGACTAAGATGTAAA
CAATATGCATTTGTAAGTTAAGCCATTGTCCATCATGGAGTACCACACGATGGACCTTTA
GTAAGCTCATTCATGTCAGAGACCACTCATTTTATTTGATCTGGATGAATTGGAAATAGT
ATATCGCATTTCATCTAAGCAAAAACATAGGTCGTGAGGTTGCATGATCATAAATCAAAT
AGAAGTACAAAACAACTAGACTCTGAATGTGTGAAGTGATGGCACCAGCAAAGTCAAAGC
TCAGCACACATGCACGAAATGTGATTTCGAGGTAAATGGATAGGTCTTGGTTGATTTGCG
ATATATCTCTGAATATGATGATCTACGAGATAGAGTTGGGGTAGCACCGATTGAGGAGAA
GCTTGTCCAACATCGTCTTAGATGATTTGGGGATATTCAGCGCAAGACTCCAGAAGCTCC
AGTGCATAGCGGACGGCTGAAGCGTGTTGATAGTGTCAAGAGAAGTCGAGGTAAACCGAA
CTTGACATGGGAGGAGTCCGTAAAGAGAGATCTGAAGAACTGGAGTATCACCAAAGAACT
AACCATGGACAGGGGTGCGTGGAAGCTTGATATCCATGTGCCAGAACCATGAGTT