| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_2548304
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37392 |
1 |
747 bp |
MLOC_37392.1 |
Available |
Available |
LOC_Os02g41580.1, FRAME:-2, EVALUE:1e-34, 13102.m04589 protein CAMK_CAMK_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
CDS Structure of MLOC_37392
Contig Sequence (4238 bp)
>contig_2548304 4238 assembly3_WGSMorex_rbca.fasta
GAATTTTCGCATGGACCGAGGAGAAAGGCGCGCGCGCATGCATGCGTCGGCTGAAAGCCG
CTCGTTTCGTGCTGACTCGGCAGGCGCCTGCGCTGCAAGGTCACTGCCTCACGCCTGTCG
CGTCGGAGAGCGGGAGAGGGAGAGGGGCCTGGCATCCTCGCCGAGCTTTCGCCGAGCTCG
TTGTCAGCACGTCGTGGCAGCGGAAGAGTTCACGTGCATGCTCTATTTGTAGCATGTACG
AGTATGTGTGGATTAGTCATGTTTTATAAGCATTGACTCACAGCCCTCACGGGTTGGGGG
ATCTGCCGTCGATGCGGCACCCAGCCCCGCATCACAGCCGAGAGCACATCCTTCGCCGTC
TCGCCGCCGAAGGGGAGCGCGCCGCCGGAGAGCAGCACATACATGACAACGCCCGCGCTC
CACACGTCCGTCTTCTCGCCGTAGTCGCCGCCGGACACAACCTCGGGCGCGACGTAGTGG
TGGTTGCCCACGAGGCCCTCGGCGCGGCCACCGTCGGCGCCGATCCATGCGACCGACCCG
AAATCCGCGTCTCAATCTCTCTCCGGCGACGAGGCGGGGCTTGAGCCGCCGCATCGCCCT
CAGCCGCTCCAGCCGCCGCGTTGACCCGATCCAGATACTGCGCGGGTAGGTAAATAAAGG
TAATCCCTCCTGTCTTTTAGGATGCGTGCATTAGTTTTATAAGATGAGCCGCCATATTTG
AAGACCGTGAGTCATATGGGCATATGACACGACCAGGATGATGCGCGGCTAGGAAACATG
GTTCAGCGAGATTGCCTGGAATCAGATGGCTGTCTATAGTGCATGTTGTTTATTGCTGAA
CTGACATACATAATTGTTTCAAAAGTCTGTTGATGTGGTATTAGTGCTGAGATGGAATAA
TTGCATGTCGAGATAAGTCTGCTGATGTGGCATTAGTAGTGAGATGGAATAATTGCACGT
GGAGCTGAGGTGGATAGCCTGCATGTCAAGAGAATTGGGATCAACTTTTTAAGAATGTAA
GATTTGTAAATAATTAACTCAAAAAGTATCCTAAAATAATAACACAATAGCATGGAACAA
TAAAAAATTATATATATGTTGTAGACGTATCACCCTTCTTCTGAGATGCCTTGGTTTTCA
AAGGGACGGCCATCACAACTTCGACAAGACATTATCATTTTTTCACGGGGTATCATCATT
CCAGGGTGACACACCCATTTTCCTGATTTTCGAAGTACATCTGTATTTCCTCCAATTAAA
TAACAAACAAGCCTTGTCTTGGTGAAAAGATGCCTTAAAATTAGCAACAGAGTCATGAAA
TGCGACAGAAAATCAATACATGTGTTAAAAGGAGAGTGTGTACCGATGAAAATAATTCGG
GGCAAAATGATGAAGTCACGTATTCATTTGAAATGAAAATATGATTGTCGTTCATAAACA
AATAGCACATTGTTTCTTCCCAAACCGTGGCTGATGACACCTAATGTGCGCAAAGTGAGT
AGTGCGTTCTGATTGGCCAAACCCAAACCACATAGATCGTATGTCTGCAACGTAGGTTGC
ACCGAGATCGAACGATAGTCCTTATACCTCTCATCAACACACGTAGTTGTAGTTGGTATT
TGATTTATATGCACTAAATGCCCCATGAAAGCTAAAAATGACTTAAATACAACGAACGAG
CCCAGAAATGCGCCAGAAAATCAAACCTGGCATATAATGATGATTGCCTACCGTAGGAAA
AATGGGAGGAGAGGTGATGAAGACAAGATTGATTGGAATTCAATTTGCCAATTCTTCCTT
TGGAACTATGATCCTTCTAGTGATATGTTATGGTTTTCATAGAGCGATCATCGTAACTTA
TGCCAAAGTTTACCAAAAACACGGGGTCTCGAGATCACGCCATGATGACACACCGATTTT
CGTGATTTTCTGAATCCATCTACATTTCGTGTAATTAAATTACCAACATGCCTTATGTAG
GTAGACATATCTCACAGCTGGAAGTTTTGAAAATTCTTTTCGTTCCTTGGACAATGAATG
AAAACACACAAAGTGACACAAAAATGATTTTAATGCCTTCTTTGCGAGCGCCCACTTGTA
GTTGCAGTTGGGATTTGATTTATATGCACTAAACATTCAATAAATAGGAAATTGGTTGAA
ACATATCAAACGATACATGAAACGTGGCACAAACTCAATACTAGGAAACAACGGTAGGTG
CGTACCGTTGGAAAAAATTCGAGACAAAACGGTGATGTCAGGCCTACATTTTAAAGTTGT
CACGTTTTAGTTTCAAAAGAATTTATGTTGCTTGTGCACACGGGTTATTATATGAAACAG
TTTGCATAGGCCTTTCCGCAAAGCGCCTGATGCTCTTTCTTAACCCTCCCCGCCCCACTC
GCGCCCTCCTCCATTTTTGAGCAACATTTCACATATTCAACCCAAACTCCATCGACAGCT
GCCACTCTATAAAAATCCCAATGCAATACCTTCCCCCCTCTTGTAATATCTTTCCTTGTA
TGGAAACCTTCCAATTTGGCATGTTGTGTTTGAAACAACATAGGTTTTGCTTCCATCCTT
TGTTGCATCATGGCATCATAAGCATCATGTCGTTTGTGTTGCATAATGTGTGTTCAAGTG
CCATGTGAGTGGTTGTGGTGAGATGTGTGCCATTGTTGAGTAAGCACTAGCCGGTGGTTT
TTCAAACATGCAAAACCTTGGTTTCTCCAACTAAGGAAAACCCTCATCTTATTTTATTTT
GGTGCAGTGTTAAAAGTTATTGTTTTTGGCCAAATAAAAATGTTGCATCTTCCCCAAATA
TTCTGGTTGGATTGTGGTGAAGTTAATTCTGATGTGAATTGCTTTTGTGCCTTCAAAACC
TTGCAAAACAGTTTCAAGTAAATGGATTGGGTGATATTTTGTTGCTATAGAAAAATGCCA
AGTCTTTTTTTCTAAAATAGTGTATAATATTGTGAGGCCACAGTATTTTTATTTTTGCAA
AACCCCTTTGTATTTTCTGTGTGTGCATTTTAGGTCGCGCTTGGAATAGATGTAAATAAT
TACCGGTGTATTTTTCTTCCGCATGTAAGTTATTGGCTGATAGTGATTTGCAGGTGAAAA
CAAAAACGACGACACTTGATCTGTATTTTTTACAAGCGAATTTAAGGTTGAAACGACGTT
CCAAATAGGGCCTTAGATGTTTGTGAGGTTGGAAATAAAACACAGGGTGTTCTTTCTTTA
AGAGAGAGAGAGAGGCTTACTCGGACCTGCTCCCTCCTCAGCGCGACCCATCAACATAGC
TCAGCTGCCTCGCAGCCTAGTAGAGGTCGAGCGCTCATATGCTTCTTCTTCCTCTGTACG
AACGACAATCCGCCAGAGCCATGTGTCCCTCTCGGTGATTTGACGGCCACCAGGGTGCCC
CAGCCCCTATAAATCGTGCTCCGGTGCCCTAGCCCTCGCCCAAATCCATTTATGCCCCTA
CCTCCCTCTCACGCCGTCGAGGAGAAGCCTTGTCGCCGTCGCCATGGTCGGCCCATGCAA
GTGATTCCTGACGGCCTAGCATCACCGATCGTCGTCCTCGTAGCCACCACAGCTTTGCCG
ACCCCGTCCGGCTCCGTTTCCACGGAGAAGGGACGCCAAGGCCGAGTGTAGCGCTTTATC
ATCGTCGTCCCCTCCTTCGGTCTTGTTGACTTTTGACCCCTCCTTCGGTCTTGTTGACTT
TTGAACCGTAGATCAAATCACCACCAAAGTTGTACACGCAGTGTAGCTAGCAAGCTAGCA
AGATAGTAGGTTGATGGATGATTGATGCATGGTCTAGCCAGTACATGCACGCGTACTTAC
GTCGGCAGCTCGAAACGTATCGATGAAACTCACCGAAGCAAACGAATCGGTGGCCGCACG
TTCGTATCGAGCCTGTTTACTTTGTATTGCTTTTCTTTTTTTGGTGTTACAAGCACCACT
CCTAGGATGCCTTTTATACACATCCATAAAGGACTATGAATATAGACTAGGACTAGGTAT
CCTAATACTACTAAGACTCGGTTTGGCTTTTTCCTAATCCTATGTGTACAGGGCAACGTG
ATTAACTCACATTCATCCCCTAATCACGATGTCTTTATTTTCGACCTCGGTCCCAAACAC
GATTGCTGCTTCTCATAACTGTTATCATCGACATGGCCTTTGTCGTCCCTTGCAGCATTT
CATGGACCGTCTTTACTGTCGTCGGCTCGTCCGTAGCT
