Contig Data
morexGenes
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Map Locations of contig_2548155 (4086 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2548155

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37313 1 145 bp None Available Available None
MLOC_37312 3 1098 bp MLOC_37312.1 Available Available LOC_Os04g51792.1, FRAME:+3, EVALUE:2e-113, 13104.m05290 protein PAP fibrillin family domain containing protein, expressed





CDS Structure of MLOC_37313






CDS Structure of MLOC_37312






Contig Sequence (4086 bp)

>contig_2548155 4086 assembly3_WGSMorex_rbca.fasta
GGCGGCGACCGACGGTGAGGACGACCAGCGATGAGGAGGCAAGGCGAGGCGGTCAGCGCG
TACTGAGGCGTCGGCGCGTGCAAGGCGGGCATCTCCCTTTTCCCGTGCGCGTGCTGGAGG
TTGGGGACGACGGGATCCGATGGTTTGAAAGGGACAAATCTAACGACTGCAGGTCGATCG
ACCCAATAGTTGGGCCGGCGCGCCAGCGCAGCTGGCCGAAAGAAAAAGAGTTTTGTACCA
TACCCAATGTCTAGTGGATCAGATGTGTAGGTTACTCCCTTTTTTAAGTCACGCGATACC
CAGGCACATATCTCAGCGCCCGCCGCACGGGAGGACAGAGGTGCGCAGTCTACTCGTTAG
ATTTTCCCAATATTTAACTCCGTTCGGAAATAACTTTGAACTAAAACTAGGTCAGGTATT
TTCGAAGGACAGAGATAACAGCGACCGGACACCCAGTGGAACTGTTTTTTGAAAGGAAAA
ATGAAATACAAAATGGTAGAAATGGGCTTGAGCCTATCGCCTCGCCACACAAACCCGATA
AGAAAATGGCGGCTTGTGCTGCGCCCCCCTACGTCCGCATCTCCTGCTCCACACCTTCAC
CGACCGCTCTCCGCCGGCCACGCCGCCGGCGCGTCCCCTCCGCCCGATGCTCCCTCGCCG
CGGCCCCCGGCCTCCGGGCGCCGCCGGAGCTCGTCGACTCCATCCTCTCCAAGGTGACGC
TCACACCTAAGTAGCTCCTTTGCCCCACTCCAAGATTCGTCCTAGCTTCTGCAATCCTGA
TAAGCAATTTCAACATGAGTAACATGCCAAGAAACAACCAAACGTTAGTGCTTGGCGCTA
AACTTGGTCCCAGTTATAGTTTGCTTCGATTTTCGCCGTGGTTTCTTAGCATGTTGCCGT
CGACAGGTGAGGGGGACTGACCGGGGCGTGCTGCTGCCGGAGGAAGGCCACCAGGAGGTC
GCCGACGTCGCGCAGCAGCTCGGCAAGTACTGCATCGACGAGCCCGTCAAGTCCCCGCTT
ATATTCGGAGGTGAATCCTGCTACACCACTGTCCCCAACCAAACCGTAGTTGAATCTTAT
CCGGCATTGTTGTGGTGTCGTTGCGCCACTTGCTGACAGACATGCCAAGCCTTGCAACCA
TAAAAAAAATGTGAGACCTTGTTCGGTTCATGCTTCACGCCGTCTTGATTGAATTGTTGA
GTTGCGCCGCGCGTGACCAGACTGGGAGGTGGTGTATTGCTCGGTGGCGACGTCCCCAGG
AGGTATTTACCGGACCCCTCTCGGCCGGCTGGTGTTCAAGACCGACGACATGGTTCAGGT
GGTGGAAGCCCCCGACATCGTCAGGAACAAGGTCTCCTTCTCCATCTTTGGCCTTGATGG
CGCCGTGTCTTTGAAAGGTAGACCACATGTTCGTTCTTCACTCATTCAGTTTAGATTGTT
CATATTGTTGGGAGTTGAAGTTCAGGCTGGCTTCAAGCCCTACATTGTTTCGACAAATAT
CAGGAATATAAGATTGCGGGTAATGTGTCAATGATCTTTTAACTCTGTGGCTGTCTGCAG
GCAAGCTGAATGTATTAGACAGTAAGTGGATTCAGGTCATATTTGAGCCCCCGGAACTGA
AGGTAGGCTCCTTGGGTTTCCGATACGGGGGCGAGAGCGAAGTCAAGCTGGAAATCACCT
ATGTCGACGAGAAGATCAGGCTCGGGAAAGGATCCCGAGGCTCGCTTTTCGTCTTCCTAA
GACAAGATTAGAAGGTTAGGCACGTATGGCACCATGCCACCATTGCATACTTTCATGTGC
TCGACGCCACAAGGGATATCAGACATATGGGTGTCTGCACAACTGCTTGCACATGTAAAT
TCAGAGATAAAGCCCACAAAGTAGTTTTTTATGATATTAATTTCTACCTGAAGCAGACTG
CCTTGTTGTGAGCGAAAATGTTTGCGGTACTCATGCTGTTTCTGATGGTTGAGGAGCCGT
TTTGAGTTGAGGGTGATGTGGTTCAAATCTGAAAGTTTATGGGGGTATATACACTTCGAA
TACATATTGCCGTCTGTTCATATAATTTGTCGTCTATCACGATCACTCCTTATGGTTCGT
GGACTGGAAGGAAGTCCCAGTATGGGGTTAGAATGTTCAATTACTACAATGTACACCAGG
ATTTTTATTGGGGATCCTAGCAGACCAAAGTGTGTTATTTTTGTATCTGAAAAAAATGAA
AACCGGCGGTAAATAGGGACCTATTGTGTTCCTATATTTTAAATGACAATAGGTAGAACT
ATTGGGGTAATGTATTATTAACCCCAATGCAAACACAAGTGAAACTCCGGACATTAACAG
TCTTGGATAAGTTGGACTAAAATACCAGGATAGTTGTTAGAAACAATTCCTTACTTAACA
CTATTTTAAATTTTGTTTCCTTATTTGACACTGAAAAACATTTACTTTTCTATCTAAATT
GTATGCCCTTTATGATACTTCCGTCCATTTTAAGCATAAATGACACCTGAAAAGACTCTT
TTGCCCCTCATATGATATGTGTGTGTGCGAAACAGTAGAAAACACAACAACAGCAGCATC
ATACACGCTAACACGCACACAACACAGATGTGTAACAGCACACACGCACACAGCAGCACA
CGTACATACGCAGCAGCACATGCATTAGCACACACGCGAGCACCCATACACACACGCAAA
ATCAGTAGCACATGTGTGTGCGCACACTCGCAGCAGCATGCACAGGTGTGCACACAAACA
TACCGTATGAAGGACAAAAGGGTCTTTTTAGGTTCCATTCAGGCTTTAAAATGCACAAAA
ATATCATAAAAGACATAAAATTTAGATCCATTGTTAGATAGAGAAGAAATTATTTGTCGA
TATTAAATAGGACATAAAATTTTAGCACAATGTTAAATAAGAAATTCTTTCTAGTTGTTT
CTTCCTCTGTAAATTAATATAAGGCGTCTTGGGAGCATATGCTCCTTGATGAATAGTAAC
TTAAAAATAAATAGTGAATAAATTTTAAAAAATCAGATTTTTTGTATGGGTGTTCATTTT
AGTGTAACAAGCGTTCTTGACAACTTTTATGCGAAACGGAAGAGCGATACTTTGTCGGTG
AAAAAACAAAATTAAGTGTAACATTTGTAGGTAACATTTGGCTTTTGATTTATTTTTTCG
TACAGCTCAAAATGCTTAAGATTTTTGACTAAAAAATTGCATGCAACATTTGGGTGTGAT
AAAGAACACATTTAATTTTTTTAATTTTTTTTACATTTGCAAAATACATTTTTGGTGTAC
AAGAGCATGCTCCCAAGAACCAAATTGGATTTCCCATTTTGTTTTCTAGAATGTCTTATA
TTAGTTTACAGAGGTAGTATTTTCCTTTGGGCAAAGACACCCTAAATTTAGAGGAAGAAC
TAGAGTCATATAAATTGGTTGGATTTTCTTGGCATGTGCCTCCAGACCATGGCTGGAGTT
ATCAACATCTTCAGCCGTCACATCATCCTCCCCCAACACAAAATCATCATAAGCCCACTA
TAAGATTCGGAGAATGCAACATGCAATAAAAAGCTTAACTTGGATGGGAAAGGATGGAAT
GTCTTCTGATTTGGGATCTTAAATCTATTCTTCGAAACATCAAATTCCCTCTCAACCGCT
ACTCTAAGATTAGAGCAGAACAATTTGATAGCAGTCCTAGGATAGTTTCTAGAATAGAAT
TCGTTGAGATGGATACTTGGTTTTCGTGAAGTGTGGAAGAACACTCGGTCAACATGCAAA
TCTAGCATCTCCTACGTAGAACTCAGTATCCCTAGCATCAGGGATACTGATTCCATCATA
TCGAGTCATGCATTCAACAAGAATGTTAGCATCATGAGCTGACCCTTTCCAGCTAGCTGA
CACATATGTGAATTTCAGATTGAAATCAACAACAACAAGCATATTCTGGCTTGTAGTGCT
TCCTACCCATGTATGCTCTGTTGGGGAAAGTTGCATGGGAATAAAAAATTCCTACGCACA
TGCAAGACCTATCATGATGATGATCATCTACAAGAGGGGAGATCGGATCAACATACCCTT
GGAGAT