Contig Data
morexGenes
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Map Locations of contig_2548122 (2779 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2548122

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37293 1 451 bp MLOC_37293.1 Available Available LOC_Os11g05730.1, FRAME:-1, EVALUE:1e-13, 13111.m00557 protein histone H3, putative, expressed
MLOC_37292 4 1214 bp AK249326.1 Available Available None





CDS Structure of MLOC_37293






CDS Structure of MLOC_37292






Contig Sequence (2779 bp)

>contig_2548122 2779 assembly3_WGSMorex_rbca.fasta
CCAACAGCTGAAAGACCGCCTCACCTTCCAATATATCTCAAGGATTTGGGCGATGAGCCG
TCTTGGGGGAACTTGCATCTCTCTACGTACCTGCAATGTTGGGTGGAGAATTCAGCTCAA
GTTCTTAAGAGAATGCGATGTTTGTTTACTTGAAATGAGATCTGCTGTACATACTTTGCT
GTCGGCCCGTCCCAGTTTCTGGCATTCCCTTCGTTGACAGAATAGATCTTCCCCTTGCTT
GGTATCTGCACAACCAAGAAGCGTCAAACCAAACACACAGATAACGAATCTTTTTTCGCT
AAGCTTTCGTTGCAGATCAGTGAATAAATTGTAGACAGAAGTGTGCTGTTGTAAGCTGTA
TCACAAACCTTTATGTTGGGATGGGTAAGTATGAACTCCCCAAGGGAAGGATCAAGAGTG
AAGCCATTCACACCATTCCCAGTGCTTAACACAAGCTGCGAGAAACCAGACCAAGGTTCA
ACCTAGGGTGGAGGGTTGGGGTAAAGTAACGGGACTGAAAATACATGTAGGGGGGCATAA
CATAGTTTACCGTGCATGAACTCCCGTACATGCAGTAGCCAGCAGCGATCATGTCGGTCC
CGGGCTGCAGCACGTCCTCCAGAGTCGCGTTGTCCTTGTCTTTGATCATGTAGATCCCAA
AGATCTGCAGAGCAGAGAAACGCCGATCAGAATGATAGCGGTGAGTAAACCAGTGCACAT
GGCGCCTTCGTTTCTGAACGGTGTCACTGAACCGGTCATCAACAGGTAGCAGCTCTGCTC
GGAGAAGCAGGGTGGCAGGGAGCGCATACGGTCCCGATGGAGACGCCGCAGTCGATGTTG
GAGGAGCCGTCCAAGGGGTCGAAGCATACGCAGTACTTCCCGCGGAGCGGGGCGTCCACG
AATATGGCCGCCTCGTTCTCCTCAGACACGAGAAGGCACTGCGCAGAGAGGAGACGAAGT
CAGCGGATCCTTGGCTCTGGATTGCTTACTTTGCCGGGAAGATTGTCTGCTCAAGGAGTC
GGAAGAGAGGAGTGCATTACGGTGCGGCCGCTGCTGATGAGCGCCTTGACAAAGACCTCG
TTGGAGAGCACGTCCAGCTTCTTCTGCTCCTCCCCCTGCTCTCCCGTTCCCGTCAACGCG
CGCGCAAACATTAATTAATAAAGAGAGGCGGGAAAGGGACTCGACTCGAGGACTTGGATC
ATGGATCATGTAGGCTGGGATCGGTTGCTTGCCTGGATGTTGGTGTCGCCGGCGAGGCCG
ATGAGCTTGGCGAGGCCGGCCTTGTTGACGGCGGAGGCGACGAACTTGCAGCCGAGGACG
ATGTGGGAGAGGAGGATGGTGAAGTCGCCCCGGGACTCCGGGTGCCGGCCCTGCTCGTTC
AGCGCGTGCCGCGTGATCGTCATCAGGTCCGTCCGCTGCGCCTCCGCCGCGTGGTCCATC
CTCTCTTCTCTGCTCTGCTCTGCTCTGGACCGCCGCCGATTCTCCGCCGAGCAACTGCGC
TAGCGAGCGAGGGCGGCTGAGGGGTGGGAAGGACGGATGCAAACAGATTGCACCGCCCGC
GGATGGTTGTTAGAGATGGGGAGAGGGAATCCGATGCGCGGCCCGGGGATTGATGATATA
GGCGGCGGAACGGAAGCCGGTGGCCGGTGGGAGGCGTGCCGGATGAGGTGCGGTGCGGGC
TTCCACGTCGGCGTGGATATGCTCGGCAGCGCGGCCAGACGTGTCCGGGAAAGAAGGGAG
GAGCAGCCTGTGCCCATTTGACCAGGACACTACTCGGGTGATAGTGTTTACTGCTACTCC
TATATGTTCGCCCTGATCCTCTGCTCCTCGTGTGTTTACATGTAGACAGTAATTAAGAAG
GAGAAGAAAAAGGCCTAAGCATCCCTGTCAGCATGTTGCATTCAGTTGACTAACGTGTTC
ATGGGAGGATAATGCAGGAGCTTCACAAGGAAGTGGCATTAAAGTATATAGAACGGATAG
CTTTAGCCTTGGCCTTGGGGCAAGAAGAAGTCCAACGGCAGATTTATTTTTTTTAGAAAA
GAAGGCCGACCTCCGGCCTCTGTATTAGAGAGATGCATACGGCAGATGTCACAGGCTGTT
AGCCATCGCTCGTCAGCCTCAAGCCCTCAACCATACATGATGCAACTGCTGCTGTGTGCT
AGGAGTAGGAGTACCAAATGCCGGCAAGACATTCAGGAAAAATGTTTGACAGGTTGGCCA
GGCTTGAGGATTATCACACTCCAGTTTCCAATCCCGGGAAAAAATGAATCAGCCTTTATT
TGTTCACCTGAAGAAAATGGGCTAGGATTGGATGTCAAAAGCATGCACAGTGACGAGATG
GTAAGATTCAGAAGCACAGTGGGGTACACAATTGGTTTGGGGCTTTCAGTTGACAATCCA
AAATATCAGTAATCCAATTTTTTGTTTAAATTTGGGGCAAGATCAGACTGACAAACAATT
GATCATATAGAGCACACAGACAAGATCCGATAGCCAACTTTCCATTGCTGATGGTAACAA
GATGGTTACATCAGGCACAGCACCAGAACACAACGAGGAACCTTCCTACCACAAACTAGA
TTTCCATCAAACGACACAGGTTCAGAAGCTAACATTCGCTACACGTCCAACGAAGCTAGA
AGTTCGAAGCAGCCTAGGCCCTCTCGCCACGGATGCGGCGGGCGAGCTGGATGTCCTTGG
GCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGCCCGA
CGAGGTAGGACTCGGCGGC