Map Locations of contig_2548000 (3678 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2548000

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37223 1 2727 bp AK369690 Available Available None
MLOC_37222 1 1374 bp AK372159 Available Available None





CDS Structure of MLOC_37223






CDS Structure of MLOC_37222






Contig Sequence (3678 bp)

>contig_2548000 3678 assembly3_WGSMorex_rbca.fasta
GCCCCTGGCTCAACTCGCTCCTCGCCGCGCTCAACACGGTGAGCGCACTCCCCCTGCCTA
CTTCCCACTGCCTTAGATCCCATCGATGAACCCACCTGCTGCCGATCTACCCTTCTGCTC
CAGTAGTAATTCCCAGCGTTTTTCCCCCTTTCGCTTTTTCACCTCCGGATGCCACCCTCT
CAATCTCATCCACCAAACGTGAAAGCAACCTGCGCTTTCGGTTGAGCACAAGGAGCTACA
TTGTAGCAAGTTAGTCACCAACCGCTACTACTATACAACACCTACAACTCACAAATTTCA
CATGGTCGTAGCATGTCTTCTCGTGCAGACTTTGGTTACATCTTCATATTTTTCTAGACG
GAATTTGTTTCACATTTGTGTTCATCTGTCTACATTTTTCTCGAGAACTTTCACGCGCGC
TGTCCACGCAGCAGTTTAATCCCAGTTCGAGCGCTACTGCCTACTCGTAGTATAGTGGTA
GTATACTGCCCATATTTACAATTGATTAGAAAATTAATACGCACCGGTGGCAGTTGCGCA
TCAACATCTATCGCTTTAATTATAGGAATGATGATGCATAGGCTCTGGTACTGTGACAAC
AAGTGAATCTTTGTGAATTGTCGCTCCTGCTGATGTGAGGGAAGCAAAACTAGCTGGTAT
CCACAAATGCAAGAAACCGACGAACGATGTTTTTTTTTTCAGATGACCGACGAACGGTGT
TGGGTGACTTGGCTCACCCAAAACCGATAAGATCAGGAATATCATCGTCATGCATTCTTC
ACATATCCATGGATTTCCTGATAAGATACTGCATCTGGCTAGATAGCTACCCGGTCCCCG
CTGCAATTGCTAGTTGCTAGTGTTGCCATGACGGAATCCATCCTGAATGTGACGTGCGAT
CTTGTCATGTGCAGGTGTTCGTCGCGATGCAGGCCGCATACATCCTGTGGGCCGTCCTCG
CCGAGCAGCGGCCGCGTGCTGCCATTGCCACGCTGATGATGTTCACCTGCCGCGGCCTGC
TCGGCTGCTCCACGCAGCTGCCCCTGCCGGCGGAGTTCCTGGGGTCCGGGATGGACTTCC
CCGTGGGGAACGTGTCCTTCTTCCTCTTCTACTCCGGGCATGTCGCCGGCGCGGTGATCG
CGTCCATCGACATGCGCCGCGTGGGACGACGCAGGCTGGCGGCGCTCTACGACGCGCTCA
ACCTGGCGCAGGGCGTCAGGCTGCTCGCGTGCAGAGGGCATTACACCATTGACCTGGCCG
TCGGCGTCGGCGCGGGCCTCCTCTTCGACATGCTCGCCGGCTGGTACCTGGACAGCAAGA
ATGTCGACAGCGGCGACAGCCGTTGCTGCAGCAGCTGCCAAAAGGCTCTCGTCTCAGAGA
AGCTTACATCATAGGCCCATCAAAAGGCCGTGGAATTGCAGTGGACTGGACATGATCCAA
GTCATTTTTTTAAATGCTACTTACTGATATGTAATCTTGTAACTGTGTTTGTCCTACGTA
AGTTGCAACATCTTCTGAATACAAGCATCAGAAGTTTAAAGTACATCACAAGACAGTAAA
GAAGCACAGGAACCAAGCTGGGAAGCGGCAACAGATGGCAAAGATCAAGATGCACCATTT
ATTTCTGATTGAAGGATGATACACTCAAGATTATTTTAGCATCCATGTTACAGGATGATT
TAGTCCTAGCTTACAGGATGATTTACTCATAGCTTACAGGACATACATATGACAGTACAT
TGCCAAAGTATACATCAGGTGAATAGGTGGTTATTTCTATCTAGTATACATCCGTTGTTT
CTTCTACCTCAGTCTTGCACCATGGAACTGGTCACCCCACAAACATCAGCAGGCCGGTCA
AGCAAACGTCGCAAATACCGAAATGGATCATCAATTTCATCACAGCAACACACATTTGTC
ATGCCACGTCGCTGACATCTTACACGGACACCGTTATTTATGGTCGCCATTGGCAGACCC
ATCCTGCTCACTGAGCTTGTGAAACTCGGCCTGGATGACCTCCACAATCATGGCGTCCTC
GGGGTCTTGTTCGGGGATGTCTACATGCAAAGAACCCTGCTTGATGAGTTCCTGGTTCAA
CGCCTGCTGCTCGATGTAATGGTAGAGCTCTTGGTGGAAGGGGTGGTCGAGCGAGAAGCA
ATCATCGACGCCGCTCAACGAAGCTTTTGATGAACCCTCGCGTCGACAGAAATGGGGGAT
GGAGGAATGGTCCATGATCTGCACAGTTCAGATAAATGGTCCACGGAGGTCTTATTCTCT
TATCTCTCTTGCTTAATTAGAGTGCAGCTATGTCTTGATGAGCAACAAGTGATGAAAATA
GCACTAGCAATAGCAAGTAGTCTTACCTTTAGGAGCTCATCTTTCCCACGGCCACTCAAA
ACATGAACCTTCTTTCTCGTCCTCTCTTGCAGTAGAGGTTTCACAACCTAGTAACATAAT
TAATTGACTATTGGGTCTTCGAAATAAAAATTACAAAATTAACAGTACAATGAGAAATCT
TAGGCATCATTACCTTCCAACACGCTGAGAATATGTATGGAGCATTTACAATATAATAGG
TCTCGGCCTTTTCAGGGTAATTCAGTTCATCGACAGCAGATATTGCAGTTAAAATCTGTA
CTCCAACAATAGGTAACATCATAAATATGGACTAGCGTACACAGAAGCAACAACAGGTAG
CATCATAAATATGAACTAGCATACACAGAAGCAAATATTTAGCTATCTTATAAAAACGGT
TCTTGTCCCCGTTACCACTGGATGTCATAAAGACCCATGTATTTTCCACTCTTGTATGTG
GCCAGAAAAGTGTACAAATATGAGATGCCCATGTAGGCTGTACCTTCAATAGGCTGAGTG
CTGACAACTTCAAACCAGTCATATCAAGAACCTTTATACAGCTGGTTATAGGTCGCCTAA
ACTTCTTCGTCGCCATAGGCTTGATGGACCAGAAGCAAGGAAAACAGGAGTTATTAAATC
TCAAATGAACTGGGTGATCTAAATGGCCATGTAAGATTAGTTGCGCACTCACCAGAATGA
TACGATCACGGTATTCATTGATCTGAATATGAGATTGCACATAGTAATGGACCTGAAAAC
GCAACATACTCTTTTATTTTAAAGCTCGTAAAGAATGGCAGGTTGAATCTTCATGCCTAT
AAATTCAGTAGAATACATTTCAATTACATTAATATTGCAATTTGGTAATTATCTCTAATT
GACATGGATGCAACCTGACAAACTAAACACTCATCAGAAGTGTATTTGCAGAGGAGAAAG
TGAAAACAACCAATTTGCACAAGAAGTATATGGTCAATTACCGAAGCTTTGTCGTATGTG
CTCTGTCCAACACCAAAGGCAAATACTGGGACGCCCTGGAAAAGGCAAGAGGAAAGTTTG
GGTATTAAATAACTTTAAGGTTATCTATACAATTAATTATGGTCTGGACATGATTATTTA
TGTCTCATAAAGACCCACATTGATCAAGGTAATAGTCTTTTCATAGAGATCTATAGAGGG
TGCTTGGATCCAAGGGACTTATTTTAGTCTGACTAAAAATAGTCTCTTTAAGAGGCTAAA
GTTNCAAGCACCCCTGACTAAAGAGGGGCTAAAACTAGTCTTGAGACTAAATTTTTTTAG
TCAGGGGTACCCTTACTA