| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2547972
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37205 |
5 |
2672 bp |
MLOC_37205.1 |
Available |
Available |
LOC_Os02g16000.2, FRAME:-1, EVALUE:2e-167, 13102.m01793 protein E1-BTB1 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed |
CDS Structure of MLOC_37205
Contig Sequence (6715 bp)
>contig_2547972 6715 assembly3_WGSMorex_rbca.fasta
ACGCGCTGTGGAGCCCAGAAGCCAGAGAGCATGTGGGGGGGGGGGGCAGGGGGATGGGAG
CGCTCAAATCAGCATCCACGCTCAAACACTTCGCAAATCCGTCCACATCGAGAAGGACAA
TCGAAAAAAGGGTGATCCGTGTGATTATTGGGACGGATTAGCTCACACCTTTTGTGAGAA
GAGGAAATCAAATATTACCAACAATCCAAAGTTGACTTCATTTTGAAGTGAGATAGTAAT
ACACAATACTTTCAATTGGTTGCCAATGGGCGGCATAGGAAGATGTGTGTCTTCTCTCTT
CAACAAGATGAGGGTCAGATCGAAGGACATGCAGAGCTCAAAATTTATATCACTAAATAC
TACAAGTCTCTGTTCAGGCTGCCAGATGAAGGGAATTTTACACTTGATGAGACCCGAACA
TATGATATTCCACAAGTCTCGGCAGAAGAAAGGAATATCCTCATGTCATCATTCTCGGAG
GAGGAGGTGAAAGTTGCGGTGTTCCAAATGGAACATAACAAAGCTCCAGGCCCCGATGGC
TTCCTCGCAGAATGCTATCAGAATTTCTAGGAAGACATCAAGACTGACCTTTTGGAGTTG
TTCAATTGTCTCCATGCCGGCCGACTTGAGCTATTTAGGCTTAATTTTGGCATTATCGTA
TTGTTGCCAAAAATTAAGGAGGTTAGCGGATTCAGCAATTTCGACCCATATGTGTCCTTA
ATGTGAGCTTCAAGATTTTCACCAAAGTGACCATTAATCGGCTCAACACGGTTGCATGCC
ATGTTGTCCGACCATCTCAAGCTGCCTTCGTGCAAGGAAGAAACATACTCGATGGAATAA
TGATCCTACATGAGACCGTTCACGGGATGCACCGGAGAAACATGAGTGGAGTAGTTCTCA
AGATTGATTTTGACAAGTCCTATGATAAGGTCAAATGGGTTTTCCTTCAACAGGCCCTAA
GAATGAAAGGATTCTATGATAAATGGCGTGAGTGGATCAAAAAGTTGTTACTAGAGGTAG
TGTGGCCATCAAAGTAAATGATGACATAGGCCATTACTTTCAAAGGAAAAAGGGATTACG
TTAGGGTGACTCCATGTCTCCAATGTTATTTAACATTGTTGCCGGTATGTTGGCGGTTCT
GATTGAGCGTGCTAAGCAGGACGGTCAGATTGCAGGAGTAGTGCCACACCTCATGGATGG
TTGCCTCTCCATTTTGCAATATGCCGATGATACAATTCTTTTAATGGAACATGACCTAGA
CAAGGCTCGAAACCTGGAACTCTTGCTTTCGGCTTTTGAGAAAATGTGAGGCCTTCAAAT
TAACTTCCATAACAGTGAATTGTTTTGCTTTGGAGAAGATGGTTAGGCGGCAGGTGATTA
TGCTGACCTGTTTGGTTGTGCGCAAGGCCATTTCCCGATTAAATATTAGGGAATTCCGAT
TCATTATCGCCGTCTCACTAATGTGCAGTGGAGACATATAGAGGAGCGTTTAGAGAAATG
ACTAAGTAGTTGGAAAGGCAAGTTGCTCTTTATTGGAGGACCCCTGGTCTTGACCAACTC
GGTTCTCACAGTCATGATTCTCTATATGCTTTCTTTTTTCCAGCTCCCAAGAGGGGTCTT
GCAAAGACTGGATTATTTTATATCCAGATTGTTTTGGCAAGGAGACAATGAAAAGAAAAA
ATAGAGACTGGCAAAATGGAGCGCGGTTTGTAGGCCTAAAGATCAAGGGGGTCTTGGCAT
TCATGACGTGCAGGTCAAAAATTATGCCTTACTTAATAAATGGTTGTTCAAACTTCTTCA
CAGTTTTGGGCAAGTCTAATGGCGGCAAATAAACATCTTTTCTGCTTTGGATCTTTCGCG
ATAAAAGATGGGTCTGAGATTCGTTTGTAGGAAGACAACTGGTTAGGCAATGCGAGTCTC
CGAGAACAATATCCAGCTTTGTGCCGGATTGTCCGTGATAAAAATGAAACTCTTGCGCTT
GTGCTAAGTTCCTTTCCACCGGATATTTCTTTCAGGCGGGATTTGATTGGGCCCTGTCTT
GTGTCATGGCAAAATCTTTTGTCCCAATTGAATACAACTAACATGACACAAGGACGAGAT
GTGTTTTGCTGGAACCTCACTACATATGGGCCCTTCACAGTTGACTCTATGTATCATGCG
CTCACACGGTCAGAGATCCTAGTAGATAATAACAAGTAAATTTGGAGATCAAAGATTCCA
CTAAAAATTAAGATCTTCTTGTGGCACCTTCGGAAGGGAGTGGTTCTAACCAAAGATAAC
CTCGCCCGTCGCAACCGGCAAGGAAGCAAGAAGTATAGTTTTTGTACTCATAATGAGACA
ACCATACACCTCTTTTTCCAGTGTAAATTTGCGCGTTCTACGTGGTCAATCATTCAAATA
GCGTCTAATCTTTATCCGCACTCAGTGTTGCCAATATTTTTAGTCATTCGGTTGAACCAT
ATTACCTATAATTTCAAAACGCTGATAAGGGTGGAAGCGTATGTCTTATTATGGTCGCTT
TGGCTATGTAGAAATGATCTGATTTTTAATAACAAAGACTCTTCTCCTTTGCATGTTATT
TTTTGTTGTACGCAATTGCTTCGTACGTGGTCTATACTTCACCGTACGGAGTTCCAACCA
TTGTTCAAGACGGTGTGTACGCAATTGGAGCGAGTGGCTATGAAGGTTTTCCTCAACACG
GATGACAGCATAACCTCTGTATTGGCCCATCACCTCCTCCGACATTTGCATAGTGATGAT
CGTCCTATTTGACTCTACTAGTGCCAATATGTCAACTTTGTATTTCCTTTCAGATTGTTT
CTGTTTGACTATGTGCATCCTAACTATGCAGAGGCTACTAGTGCCAATATGTCAACTTTG
TATTTCCTTTCAGATTGTTTGTGTTTGATTGTGTGCATCCTAACTATGCAGAAGCGGGGT
GTTGCTCATCACGACTTGTATCTTCTCGATGCTATGTTTTGAGTTAATGAAAACGCCCTG
TATCGAAAAAGTAGCAATGCAAGCGCTGAAGGCCTGAACCGCCGAAACACAGACTGTCAT
CGAAGATTCAAGATTCAGCAAGTGTGTGGACACTAACATTTAGAAAAGAAAAACACTATA
GTAAGTCAGATGAAAGCAGTTGAAGCACCAAATAGGAATCTCCTTACATCATTCAGGCAA
CAAACTCACTTTCCCAGCAGAGAGACCATTCGCACAAGCATAACATTCAAAACCATGATA
CCAACATACAAAAGTCAGCTGTCATCACACGCACACACACACACACACATGTTACTACTG
ACTTGCAGTAGCAACCGATCAACAACAACACATGATTCAGGGTACCCGTACAATGCCAAT
ACATCAAACTTCCTGGCTGCAGCGGCAGCTCACAGTATCACATGCAGGGCTCAACACACA
GTATCACAGCAGGTCACAGTATCACATGCAGGTCTGTAATTCAGGCTGCTCCACCACAGT
CAGATCTACTCTCAGATGCAGCACACCGTCGATGAAGAGGTTGTCGTCTGCAATGAACGT
CGACCATGGAACTCCAAAAAGATCATCGCATCCCTCCAATATAGGACCGATGAATGTGTG
CCTACCGCCGTACTTGCTCAAGAATTTTCCTGACGATCTTGTCCTTGCAGCAAACTCAAT
ATCGAAACACAACGAGCCTGAAATAGAATTTCCATATATCCCTAACCAGAGGCAAAAGCT
GTACAAGTGTGTCTGCTCATCCATTACACAGTTTGCCATGACATAGAATTTCTGACCTGC
GAGATGGAACCAGTCCGACAATATAACTCCTGATGGGAAGAATCGGGAGCACTCGTCGCG
CTTTAGATCCATGTAAACTATAACCTGTGGGTAAGGTCGGTCAAACGTAACTGTTTTCAC
ATGCTTGTACCCGTAAGTTCGCTCAGCAGATTGCCAATCGAGAGTTGATGCATCTGCTAC
AAGAGCATCTTCCATCTGGGTTGGGTAAGCTTTGTGGAGAAGTACCTCAGTGATGTGCTT
ACTTACTTGCTCATGGTCTATGTCATTATCAGTGCATGCTAGGATGTCCTGAAGTGCCGC
ACATGTCATATGACTGAAGCGTACCAGTGGAAGTAAACGACAGCTCAAGATCTCGCGCCT
TTCCTCCGGTTCTAGGTATCGTGCACGGGCCCACTTGAGGAAGAAGTTATATACCTCATC
TTCAGATGCTACTTGTAGATCAGTGCTCGAAAAGATGGCCTCGATTCCTGAAAGAGAGAT
GTTCATCACTACTTCAAACCTGAAATGAGACAAACCATGCCATTAGTACACTTCATGCAC
ATACAATGGCCAATGCCTACATTTTCTTCGAAATGAAAAAAAAAAAGCTCCATGAAATGG
GGATCACTCACTTTTCTAAAATCTTGTATTTCTCAGCAAGGAATTCCTTGGCTGCATCTA
CCACACGCTGAACTTCAGCAGCCATTGAAAGCGAACATGGGTGGTCTAGGTATAGCAGTG
CAGATTCTGTGGTCATAGGCAGGCTTGTGAGCAACTGACTGCAATACCACATGCAAGAAA
GAACCTCAAATTTGTCGGCCGCCATTAAGATGTCGAGCAGAAGAGTGGGCTCAATTGTTG
TCAACTTTCCACTGTACATGAATCTTAAAAGCTCCATAAAGGCATTTTCCTCTGTTCCAA
GTAGAATGAAAACAGAAAAATCATAAGAGAACAGTTCAATAAAGAAGCAAACAGAAAGAG
GAAACTTGTTTTGCACCCCAAATAATTATCTAAGTTGACTATTGACTTACAGTACTGAGA
AAACCTCCATGGGAGATTAACTTTTTTCCAATGCAGAAATTCTACATCTATACTAAAATA
GAATACATAGAAACGATCTCAACCATTCAATACAATCGAATCCAGTGGGTCATAAATTAC
GTTTGGCCTTGCAAATTACCTCATAATTGCTTATCAAAAAGAGACTTAAGAAAGAGATCC
CTGCTTAAGAGGGAGTTAATTAATCCACAGACTGCCCACATCGAGGACTAAAAGAGATGA
CAGGCATCAGTGGATATTTAGATAGTGTATGGTACATGCAATATATACAGTGTGCATGCT
GAATTACCAGTAAAATTAAGTGCAGAAACTATAAAAAAAGATAATCGTTTATTTACCATA
AATAATCTTATGACAAAAAATAGCAACACAACCACAGTAGCAAATAAGAATAAAATATAA
GAGGAAGAGTGTTACAGTTAAGCTATTACATTACCTGAATCAGCAATCCTGATTCTTGGA
TGCGTCTGGTCAGATTCATTCATGCCATTTGAGAAAAGCTAAGAAACATGAAGCTTATTA
GAAAATTGAACTGATTATACAAATGCATTTCACATGGTTATAAAATTACCTTTAGAAAGA
AACGACTTCTTGCAGCAAGAATTACTGAATTGATATGAAGTGCCTTTACTGTTAAAATTG
GTGTATCTGCCATGGTTGAGGAACAGTCTATCTCTCCATTATCAGCTGCAAAATACCAAG
ATCAGTAAAATACAAGAAACTAGGAGAAGTAAAAGGTACGCAGTTACACAATTGGACATA
TTTTCTTCTTTGAAAATACTTGAAACACTCTGTTCAATGGTGCAGATTCATTTAATCACT
CTTCAGATATGTGGCAAATGTTTCAAATAATATCACAAAAATTGAATGGCAATTTAGCTG
CAGCCAGCAATATAAGCATGCTTGTAGCTCAGTGAGCAAAGAGATCATAGATGTTATCTC
AAGGATCCTACTGGAATATCATATAACTTCATCAGATAACTATTTGTCACAAGCCGAACT
TAGGCAATGCCTCTTGAAAAGCTTCACCGCAAACTTGACCAGGAACTGTAACATGAATAT
TAGAATTCCAAAACCCACAATTCAATAAAGGACATCAAGTAGTAGAGCTCTAGGTGTCAG
CCGGAATAACATCTTTTCAAGTTTTCTGAGTCGCAAGGTTCGCATCCATTGTCCAGTGGC
TAGTCCCAGTTGCAGACTTGCAGCGGATCGACTGTATTCTACTTTTGCAGGGACAGGGGA
TTGATATGTTTGAACACCACAGCTAAATCCAAATACTTGACTAAATATCTGTTGCATCAT
CATCAACCATGCCCTCCCGTGGATCCCAGGCACAGCGGCGACAGCGGGCTTCGCAGCCAG
CACGCTGGGAACCACTCTGCATGGGACATCGTTGCGGCTCAGCCAGTCTTCAAACGGCAG
GGGGGCTCAGCTCCCCCCCGGCCCGGCGCTGGCGAGGCCACCAAGGTCCAAGGTGGAAAT
CGCCGTGGCTCCAGGAAATCACCGGGCAGGTGGAAATTGCTCGCCAACGCCCAACACCGG
GGAAGCCCTTCCCCTTGGGTCACCGGGGGGGAGTTGCCACCACCGCGGCAGGGGAGCCCC
GCGTCTGGCGGAACAGGTGGGTATCGCGCAGGGCCCAGAGTGCCGCCCGGTCTCTCCGAG
CCCGCCGCCGCCCGCGACGACGACCTCCGTGATGTCCTCGTCGTAAGGGTCTGACCAGAT
CCCGTAAATCCAGTCTGATCCGTATTTTTTTTCACGGGAGGCCTGTAAATTGCCCGTGAC
TCCGGAATATGCTGGCTCCGGTCAATTTAGGTTTTCCCTCCGCTTTCTCCCCTTTCATCC
TCCACCGCAAATCGCCCCCCCCCCCCCCCCACAAACAAACCCCCCCCCCCCCCCC
