Map Locations of contig_2547947 (6839 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2547947

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37188 2 1113 bp AK372711 Available Available None





CDS Structure of MLOC_37188






Contig Sequence (6839 bp)

>contig_2547947 6839 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCCCCCCCGCGTCCCTGGCACGGGGCAGGCCAATATGGGGTCTCAGCTACG
GCCCAAGCCTTCCGACGATGGGCCTCCGCTCTGCCCCGTCAGAAATTTGCCTTTATCTTT
TATATGAATTTGGATCACGGTTAAAAAAAAGACAAAGCCATAATAGGAGAGTCCTTATTT
TCTTGTTATCTGCATGAGTGAAGAGAGGAAGATGTAGCATGGCATACATATCTCTCTTCA
TAGCAGATGACGAATAAGGCGGCTTCTTCACGTCCTTGAACTCTCGGTCGTCTGATCCGC
TTCTTGCAACGATCTCATCCGTCCGATTTTCAAAGCTCGCATCAAAACCTAGTAAAAGGA
GAATGTCGGTGCTTTGTGTTGCCTATGGTCTAGCACACCTAGCCCTTGAACAACATATGG
TTTCTCCTAGGCCAACAAAAAAAAGGTTTCCCCTAAGCCAACTTTTGATTGTTTTAAGTA
CATCCTCCATCCTGGTTTATTTGGTTCCATCGTATTTATTACCAAAATTGACCATAAATT
TAACTAATAAATTATCATTTGTAAAAGGTAATTAAATATAAACTAGATACCAAGTCAAAA
AGTTATACCCTAGAAAATCATTTTTCGAATACAAATCCAGTACTCCCTCTGTCTCAGTTT
ACAAGTCCGACACATATATCTAGGTCGTCAAGTTGACCAACTTAATGAGAGGCATATATA
ACAAAAAATATATCATTAGAAACTTTAGATGTTCTATTTTCCAATGACATAATTTTTATG
TTAAATAATATATTTTATATAAATCAAATTAACGATCTACGTACAGGGGGCGGACCCACG
TTGGGCTGAGTGGGGGTCCTGGCCCCCAGTCATTTTTTTTTTTACTACTATGAAGCCCAA
TATTTTACTAGTTGGGCCCTCAGTTAGTCAAATATTAGTGCCCCCAGTCACTTGGGCCCC
TGCTGGATCTTTGGGTTGGGTCCGCCCGTGTCTAGATACACGTGCATGTCTTCTAAATTA
TGACGTAGGGAGTAGTATACATAAGATATAACATATTTTATTAGGCATATAGATGACCAA
AATGTGACCCAAAATAACATAATAAACACAGAGGGAGAAAGTAGTGTATATAAGAAAATA
GTGAAAATATTACGCGAGGATAAACGAGCCACGCTCATGCAAACCACAAACCATGCACAT
CCTATATTTCTTTGTGGTGTCTAGGAATTGTTTTGTTGTAGAGTACTCAAATTATTACCC
TCTGGATCAAAGAACAGTCCACGATATACTTTTTGACAATTCCCATAGAATGTCATAGCA
ATTACAAAGTCATCAACAGAATCCCCGCAAAAAAAAATCATCAACAGAATGAACTGAACA
GAACCTAGCTTAGCTTAGCTATTTTTAGCTCAACGAAGAAAAAAAATGAATCATGGGTCC
TAATTGCACGCACGCATGCATTGCACATTTGCACGGATGTGTAGCCAGCCGAGCCTAACT
CATCTCCTTCCTCCCGCCGTCTCCCTGGCCACTGCCTTGGCCCACAGCTTGAGCTTCTCT
TTGACGTCGTCGTCATAGCTCCGCGGCTTCCCGCCACGACGGAGACGCACTTCCTCCTCC
CGCCGGGACGCCATGATCATGCCAACCGGCACCACCTCCTCCAGGAACGCCTCGAAGGCC
CGCAGGTGGTCCGGCGGCATGTCCGCGGCGTCGTTGACGTGATCGGGCTCGGAGCGGCAC
GCCCCCGCGGGCATGCAGCGGCGTCCGCCGGCCATGGCCAGCGCCTCGGCAGACGGCCCG
CCCTTGCTCGGCGCCGCCCCAAGCGTACGGCCTTGCTGCTTCTTGTTCTCCTCCTCGGTG
GCGCACATCGTCGTCCTAGAAGCAACCGGTGCTGCACTCCGTTGCACTGATCGGTTGTTT
ATCGGGATTGTATATGTGCATGCTGAGAATGCAAGCTCTGTATTTATACACGGCTAGCTA
GGTAAGGTACTGCTCGATCACGGCCGGTCAAATCATTTGTTGGTCTGGAGAATTGGAATT
GTATGAGAGGATGTGAGTACGGAGATGGCACACTCTTGTGCGCACCGTATCTGGGTATCA
CGGGTGCGAGCTTGGAACGGATTCGTCGATCCGGCTGACGCACACGTACAGAATGCAAGA
AAGATGCATGGAGCTAGGTAGCTTGCGCGCACGTACGTACGCACACGGTTGTTTCCGTAT
CCGGACGTGGTTCATGTGAGCTCGCCCCATCGACCAAGACCGGCCGGCCGGCCTCGCGCG
CTCTGACCAACATATGCGTCAATTTGTCTGTCCCGTAGTCGTCTTTGGTGCATGGTCACG
CTTGATTTCATGCATGCGTGCGTGCGTGCGTACGTCTCCATATTTCTTTTTGTCGGGCGG
ATGTCAGATGCATACTAGTAGTAGTAGTGGTCTCGAAGCTTGCACGGGTGAGCCTTGACT
TGCACTTGCACGTGTGAGTGCCGATGGAAGGGTCTTTTGGATATCAATGCATGCATCCAC
GCGACGCGACAGCATCGATACGGGTACTCGAGTAGATGATCCTCATGTAGGTAGACGTTG
CAACTTGCGTCCTCCTCGATCGGCTAGCAGCAGCTGCACGTAGGAGCACTAGTGCGACGT
GTGAACGCATCCTCTTTGGGCTTCGGCTAGCAGTCACTGTAGCATCTAGATTTTGACTTT
GACTCGCCGGTGCAAAAAGGTAACCACAAATATCCATTGACCAATCTGCCAGACGAAGGT
TTAATAATTACCCGGATCAGGTTGTATATAAAAGTCATATCGGATGCCGAAAATGCACAT
GCGGATATCGTTCATAGGAATAGTAAAAAATTCGAGCTAGCAAGCCGCATGAAAACACTC
GCGCTTACGGGTTTCTACCAGCATACGCACCCACTTAGATCTTGTTTGATACAGTACTGG
TGTATTTTAGGGAATTAGTGAGGATTATTCTGGTCAAACTCTTAAATCCCCACATATTTC
ATAACACAATTTGGTTCTAGTCTATTTGATATGTTTCATCCCCATATTTTCTCATAAATT
CTCAAATTCTAGTGCATTTTTTTCAATACACAATACACTACCCCTACCTAGTGGATTGGG
GATAAATGGGAATTTGAAGGGATTGTGTGAAGGTTGAGGTTTCATTTAATCTCTGTGGGG
ATTATCTCCATCAATCTCCTCAAAAACCCTAGTACCTAGGCCTTGTTTGATACTAGTGTA
TTTCAGAGAATTAGTGAGAATTATCTCAATCAAACCTCTAAATACCCACATATCCCATAA
CACCATTTGGTTCTAATGCATTTGATATGTTTCATCCCCGCATTTCCCCACAAATCTCCA
AATTCTAGTGTATTTTTTCAATACACAATACACTACCCCTACCTAGTAGATTGGGGATAA
ATAGGGATTTGAAGGGACTGGATGGACCTTGTTTGATACGTGTATTGTGTATTGAGAAAA
ATGCACTAGAATTTAAGGATTTGTGAAAAAATATGGAGATGAAACATGTCAAATACACTA
TAACCAAATGGTGTTATGAAATATGTGAAAATTTAAAGGTTGGACCAAGATAATCCCCAA
CTGCAGGACAAGAATTTACCAAACAAGGCCTTATGGTAAATTCTTGTCCTGCAGCCGATC
GACTACAACAGCCAGCGCTTGGCCTTACGAGTCACCGACTCTTCTCGGTATGTTCCATCT
GATCTTCGCTCGATTTGGTCACGAGCTCGACCACAAACCACAGATACTGTGTCTCCCCAA
TTCTACATGCTTTTTCTAAATGCTGTTAACCCTCCTAATTACTCTAAAAGATCTTATATC
AGTTTACAAAGGGGGTATGTATTAACAAAGAACAATGCATAATTTCCATGTGGGAAACAC
ACACATATATAGAGCAACGAAGAGAAGAGCAAGTGCTCATGGTATATAGCCAAGTGCACA
CCATTCAGAGCTACAAAACCATTTCTTTCAAAGCAACTTCAATCAGGAACAACAAGCGTC
TTGCTTCTATATGAATCCCACAAGTTACAGTGAAGTTCCAATTTCACAAAGGGTGACGTA
TTATAACACATGTTACAGGTTTCTTTCTGCATGAACATGGTGGGCGGCGTAACCAAGTCG
GCAAATGGTTAGAGAAAAACGACAACTCATGACCGAGCAAACGCTCCGTGGATGATCGCA
TGAACTTCAACTAACATCCTACAACCATAAGTAACCAATTCTTTTCCTCGTGATAATTCG
GCCATGAGAGTTGAGATCCAGGGGTGCTCTACAGCTCTACTGCATACTTAAGCTACACCG
CATCAAGAAAACACTGGGGAGTAGAAACCACCTAGCTTGGGGGCGAACTGTTACACCTTG
GCTACTCCTTGACCCCGTCTCCCTCTATTTCTTTGTGCATGCCAGTTTGTTCGCCATGCA
TTTCTGTGTATGTGCCTGATTGTTCGTCGTACGAGTACCTGCACATACGATATAGGACAT
CAGCACAGATACTACCAGAATTCAGAGACCTGCAACAAGCTGCAGCTATATGATATGGAT
GACGACAAGCAACTTTGTGCTATAATGGAAAATTCAGAGCCAGCATATCCATCACTCGGT
TACATGAGATTATGGTAACAGTACAGCTTGGATCTGATACCCGTTTCCACGGACCAGTGT
GTCCTGTTCAAACCGACAAAGCTAGTTTACCCCTTGTGTTCTGAATCTTTCTTGTGTCAA
AAGCTTTGTTTGATGCATTCTGTAGTTCTATGGTCATGCATCAAATTAGAAACTAAAAAC
AACTCAGGCTGATGCTTCACCAGCAGCGGCCAGTGATTACCTGCCTAAAGTCAAGCTATT
TTTCATGTGGGATACAATTCACCCTTAGGCCGTGTTTGGATCAGCGTTTCAGCTTGTTTG
TGGCCGGTTTAGGATACAGACCTCCTCCTGTCATTTTCATTCTAGGCAGAAAACAAGAGG
TGACCGGTAATTTACATCTGTAAAATAAATACAAGTGTAAAAACTTACACCCATTCCAAG
CAGGGCCTTATTATATATGGGGTACATTTTTTATTACAATGGTTAAGTGGGCACATGTTA
TGTGCAATAAATTTATAACAGGCTAGCAATACTCCCTCCGTCTGTAAATAAGATAAGTAT
TACTCCCTCCGTCTGGAAATACTTGTCATAGGAATGGATGTATCTAGATGTATTTTAGTT
CTAGATCACTGAAATCACTGAAATAAAACAATAAGCAATTTCTCTATAACCGAGAATGAC
TGCAATGAACCTCAGATCGTTCCAGGATAACCAGAACTACACTAAGAAAGAGCAAACTCA
CTACTAACATTCAAGGATCCAATCCTACCAACCATGATCTAGTCCCCTATTTGGATAACG
CCCACATGAACATGATAACTTTCATTCACATCACGATTGTTCAACGGTATTGGATTCCTC
TAAGCAGGTCATACAGTAATTACCACAAACGTACTAGCCAAAAGGAAAACATACTAGTAA
GCAAGTTGTTGCATCCACAAAAAAGTGGTCGAACACACAGAAAGAAACAACATCAATTTA
TTGTGAATGAAAGAAAAACGCAAAAGAAATACCATGTTCCTGTAGATGCAGCACAATAAC
ACCCAGATGCAGCATCATAGTAATAGCCTGTGCTGCTGCTGTAATAGTAACTGCATGAAA
ACCAAAAAGGGAGTATAATTGACACAAGTAATGAGTTTAACAGTACGACAGTCAGCTGCT
AACTACATAACTCTTGCTGTAACAAAAAACTAAATTATATATATATAATTGGAGTGTAAC
TGCTGCAAATTTCCATAAAGTAAGATCTATAACCTACCCTGACGATGGATCGTAGACATA
ATCTGAGTCTGCACTTCCATTACCAACCTCTGCAAGCATAATCAAAAGAGTTGCTAATAA
GTACAGAAATGATTCTTGACATAAAAAAATGGAGACAGCATGAAATTGTTCGGGATCACT
AGATAACAGCTTACTTTCAGCACCGGAGGTTCCAGAAGTATCTTGTGGTACTGTCTCGGG
ATTGGAACCTGAATCTATAGTTTTTGCATCAGAATGAGGATTGACATCAGTGTCGTCATT
TTCACCAAACATGTCAAAGTTACTATCATCATCATTTGCTACAGCAATTGTCGCAGAGAT
ATTGGCAGCTGAAGGACCACTGTCCATCTCCAGTAAGGACGTGGTAGTTGGGCCATTCTC
TGTGGTGTCTGCAAATATATCTTCTTCAACTTCTGGTATACCAAGTCGAGCACGCGCTAG
ACGTTCATAACCCTCTGCGGTAGGCAAAATGATGGAAACATGTAATTAGGTGTGATCCCC
GTTGAGACAATATTATGGAATAATTTAAAATAAGCATAAAAAAGCACAATGCTCATACAA
GACTATTCATAAAAGTAGCAAATATCCGCATGGATTTTTAGACCAACAGGGTCTATCTGC
TTATCATTTTCTACCATCGCCTTTTGTAGCTGGATATATTCTTAGTTTCATCTATCAGTG
GGTCGTCTTTTGAATGGGGAAAATATATTGTGTGTTTGTTTAATGAGCCATCATGTAAGC
TTGACTAAGTTATGTCAACACCCATCTTGTATGGACAATTGTGCTAACTCCAGAATAGGT
GATAGCAGTAGCACGAACCATGTAAGTACTTCTATTCATTCAAGCAGGAGAATGGATTCA
AATGGGTGGTAGTCACTTGCTAGTCACTTTCCCCACTCGCGGCAGGTGTGGCATGACACG
CTCTCCTGGCTGCGTTTGACATGCCGGCCGCCAGACCAAGAGGCCTCCCTAAACGACTG