Contig Data
morexGenes
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Map Locations of contig_2547909 (4869 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2547909

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37172 1 820 bp MLOC_37172.1 Available Available None
MLOC_37173 2 1797 bp MLOC_37173.2 Available Available LOC_Os03g45270.1, FRAME:-2, EVALUE:4e-70, 13103.m04875 protein CS domain containing protein, putative, expressed
MLOC_37171 2 522 bp MLOC_37171.1 Available Available None





CDS Structure of MLOC_37172






CDS Structure of MLOC_37173






CDS Structure of MLOC_37171






Contig Sequence (4869 bp)

>contig_2547909 4869 assembly3_WGSMorex_rbca.fasta
CTCCCATCCTAGATCCAGATGCTAGACTTGCAACCATGGCCCCGTCGCCGGCATGGGTTT
GGTGCATGTTACACCCATGGCAAGGCAGTTCTACGGCCGGCGTGGTGCGCTCTACGACCA
CAACGTCGCGATGCTACAACCGACAACTGGCCCTGCTGGAACCATATTTGCGGTGTGCTG
GAATCATGGGAAAAAAATGATACATGGAAGGACTACGTGTTGGGGAACTGGCTGCCGAAG
CTGCATCCAGCTACTCTTTTTGCTACATCCGGCATCGATTTTTTGCTGAAACTAGTCAAG
TATCGGCTGTGGAAAAAGCTTCAAGCCAGCATGGGAAAAAAGACTCCATCCGAAAGAAAA
TGCCTCAACCGTTTGTTGAAAAAGCTTCAACCGACTCTGAAAAAGCTTCATCCAGCTAAA
GGAAAAGCTTCAAAGTAGCATGAGGAAAACCAAGCTTCAAAGTAGCATGAGGAAAACCTT
CCACCACAAAAAAGCTTCGATGGTGGAAAATGCTTCAACCGGCGGTGGAAAAGCTTCAAC
CTACGAGAGGAAATGCTTCAAGCGGCAAATGATGAAAAAACTTGCACATGTGAAAAAAAT
TCAACCGGGGAAACACTGATGGTACGAGCGGACGACGACGAGAGCTGCGCCGGCAACACA
GTGGTGCCACGACGGATGTGCTACGACAACGACGGGGCTAGGTGCTGGAACATTTGAGGC
GTGAGCCGTATTTTGCGTTGATTTTGCTACAAGGAGCAACAACGTCCTGCTGGAGCCGGG
CGACGACCGGCGATGAGGCGGGAAGTGACCAACTATGATCTGCTGTGAGGGGCGGAGGGG
GGAGGCGTGACCTGTTACGAGGTCTACAACTAACGGGGCAGACGGCTATGTGGGAAACTA
CTCGTAGAGATGAAGATTTCAAGGGATCTCGTGGTGGTGGAAGACTATGTTGGGCATGGG
CCAGCTGGCTAATTGGGTAGTCATAGACACACTAATCAGGTGGTTACCCTGCGACCGGCC
CAAATTTGGGCTGATCCGCCGGGGCGTATCACTGCCCATTTCTAAATTATGGTTTTCAAT
TCAGGTCCATTGGCACCCGAGACCAAAAGAACCACCGCTGTATTGCGCACCTATCCACAA
ACTGAAAACTCTCTCTAATCATCATCATCATCATCGATATATAACAATACTATTGAAGCT
CTATCGATACACCATGTCAAGAGAAACCACAGGGTACTCAGCATACATGACATCTTGCTG
CATAACAACGATAACTAAGTCGGTAACAAACCACAAACTCATAGCTACTACGTTCAGAAC
CCTAGCTCAGCGACGACCAAAGAGTAATAATCTGGTAGTTAAGAAGACATGGCACCATGT
CACAAGTCTGGTACCACCCTCCCAGGTTTTTTGCGTTAACGATAACTTGCTAGATTACTT
GCTATATAGCGTTAACGGTTACCTACTTGCTACAGCAGCACAACCTACTTCCTTCATATA
TATCCAGCCCAACAACCCCTGTCTGCTCATTTCCCTCTCAGCTTCTCAAGGTCAGGGAGA
TCTGCAACCAAACATACAAAGCCGCCGAGTTAGTTACATGGAGCAAAAATGTTTGTTCTC
TAATTGCAATTTTTTAAAGCCTCCTTGTTGACTGAATGCTACAACCACTACTTAGTTTAC
GCAATTGATGAAATTTCACTGTCGGCAGAAACTGATCCTTGTCAAGTGTGTGAATGGTCA
ACAGTTCAAGTTAAGTCAACAAAGGAACTCTTTTTTTTTTAAATAGTGTAATGAAAATCC
TTCTACCTTGCAGAATTAGTTTTTTTAATAGTGTAATGAAAATCCTATCATGAATACAGA
ATAGGCAACACTACAAAGAATATACATAGGTCTGTATGCAGAAAGTTGTGTCCATATTTG
TAAATTATAATCAGGTTCAAATTTGATCATCAGAAGCAACATAATGTAAAGGATGGGCCT
AGATGGGCACTCACACAGCATTCCATCATCAGCATCATTTTCGTCATTCTCCTGCGATGG
TGTGAAGATAACAATAAGTAACACTACACTAAGGATTAAACATAAACTGGGTAAGAAAAT
GAGGGGGCACAGAAGCTTGATCATAGTTCATACCACACCATCAAAGTCATCGTCTGAACC
CGAATTCTCTGCAATGGATTATGTGTTAGATTGACCGAAGTACAATGCATAATGAACTAA
AATGCAGATAAAAGTAAAGAAAGTAGAGCTTCATAGCAGCTACATGATGAGATCACATAT
TAAATGGCCAGAGTATGTATGATCATTAAAACAACTTAGAAAGAGTATAAACTTAGTTAG
CATATCAGCAAAATTGCTTGTCACATAATAATACATTGCAATCTGAGGAACTGGGAATGG
GTATACATGTGACCTTCAGGAAGAAAGGTATGTCCCACCCATATGACAAATGTAATGGAC
CCTGATCTTTTGTAAAGCATAATACTTAAGGTAGACAGCAACCGCTTGCAGAATGTAGGG
AAAGGCTGCATACAAAGAACCAAAGTGGTCGGACCCTTCCCCGAGCCTGTGCAAGCGGGA
GCTACATGCACCGGGCTGCCCCATTTTTATATAATATTTAAAGCAGACAACAACCAAATG
TAATGTACTCCCTCCGTCCGGAAATAATTGTCGGAGAAATGGATTACATCTATTTCTCCA
ACAAGTATTTCCGGATGGAGGGAGTACTTAATTACACCTCACTTTCTTTTCAAATCCGTT
TTCCATGATGAAATACACGAGAAAATGTCTATATTATTCAAATATATCATAGTATCATTA
GCACATACCAGACTCTTCATCCTCATCGCACCATTTGTTCCAGTCAACTTTGATGTATGG
ATGTTTTGCCTCTGACTTCAGCAAGCGCTTCCACCAACATTTCTTATCTTTCTGGATCGA
ACAGATTATGTTTCGCGAACCCACCTTTGTCTTTGTTTTGCTTCCCTATAGACAAGTAAA
TAAAACAGGTTACTTCACCAACAGTTCACAAAATAAAGTGACGATCGTCATCATCAAGAT
TGCACAGCAAATTATTCAGCGGCTAGTAGCTCAAAATATGAAGGTCCACTTCAATGATAA
TTTGTTGAGCTTCTTTTAATGTCTTTCATTTGCAATTGCTAACTGATGCCACAGGTGACA
CTTTACAACATGCATCGGTGAGTGCCATGAAACATAGTATGGCATATATATAAATATTAC
GAAGTAGATCATCTATATGTGGATTCAAGTTCCTATGATTGGCTCTGTTAACAAAGACTG
AAAGACGAGTGGCAACATTCCAAGTATTGTATATGTCCATTTGGTAGGCTTTCTAACATG
TATCCAAGCAAGAACCCAGAAGTAAAAAAACTAAACCGAATATAACTTCAACTGAAACCA
GCCCTGTATTACAATGTAGAACTGACAACCACAACCACAACCACAAATACTTACCTCAGG
CAGTATGGAATCAAATAGCTCCAGAGTGAAGCTAAAAGATTCCCCATGAGCAACAGCTGA
GAAACTAAAGATGCCCTGAGGTTCAGTCTTGATCACAACATCTTCTGCGTCTGGGACTGA
GATAGTCAGGTAAACTTTTTCCGAGCGTTGAGCCCATAGCACCTCAGGTTGACGACTGCA
TGCCATAGAAAATGCATCATGTTGTGCCACAGCACCCAAAGAAAAAGTGCGCACCTACTC
ACTTACTTACAGCAGAAAAACAATAAAAAATGCCCTAAAATAAGTAACATGGGATGCATA
CTATCTTCTTTTCTGCATACATCAGTGTGACATATTCTAAAGAGGTGATTTGGCTGAACA
TTTCTTAGTCAGAAATAACAGATTGGCTGTCGCACGAAATTGCATCAGTGTAACAAGAAC
ATAATTGAAAATGTAACTCATACTAGTAACAGGAAAGGCTCAAATAGGGCTGTAGTCAAA
CCATTAAGGTACAAATAGTGCTGAACGTTTCTTAGTCGGAAATAACAGATTGGCTGCCGA
AAGAAATTGCATCAGTGTAACAAGAACATAATTGAAAATGTAACTCATACTAGTAACAGG
AAAGGCTCAAATAGTGATGTAGTCAGATCATTAAGGTACAAATAGTGCTGAACGTTTTTT
AGTCGGAAATAACAGATTGGCTGTCGCAACAAATTGCATCAGTGTAACAAGAACATAACT
GAAAACGTAACTCGTACTAAACAGGTAAGGCTCAAATAGTGCTGTAGTCAAATCATTAAG
GTACGCCATGTGATATAACGCGCGCCTGTTCTAAACATTCCCCCCATCTTACTGGAAAAG
ATGAGGAAAAGCTCTGTCGGAGTGCAATCGAAAGGCGGTCATACTGCTCGACGACAACCA
GATTAATATCCTACTATACCAGGCGCGCCTCCGGCGTGTTCACCAGGCGGCATGCTAGGC
TGAAATTCACAACTATGTCATGCCAATGTAACAAAGTGTGCAGCAATAGACGACAGGCAT
CTTTGTCAACATCAACGAAACGGCTTGTTTTTTTTTTGTATCGAAACAAATAAACAGTGC
AGTAACCAGAGCACAAGAGACACTGGACTAGGCAATGCAGTTCCTATTTAAGCAGCCAGG
AACAAGTCTCAGGCGCTTCCAGGACCAATGTTTGCTTGCTGAATACGACGCCCCCCCGGA
CGACGGCCTCCGGTCCTACGGCCGCCTCGAGCATCCGACCGATCAACCAACCCCGGCCCT
ATCGCCCATGATAACCTCGATAATCCACGGATTCGGCGCGAATTTGACGGACTAGGAGGC
GGTAGGATTCCGCCCCGATTTGGTGCTGGGCGGAAACGAACCGCCCCGCGCCGCGTTGTG
CGGAGACGA