Contig Data
morexGenes
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Map Locations of contig_2547899 (4205 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547899

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37167 1 849 bp AK253004.1 Available Available None
MLOC_37168 4 2274 bp AK356104 Available Available None





CDS Structure of MLOC_37167






CDS Structure of MLOC_37168






Contig Sequence (4205 bp)

>contig_2547899 4205 assembly3_WGSMorex_rbca.fasta
TTCCTCTTTACTTAGACCATGATTCAGCCATTGGATTTAATTTATCGTTGCACAACATTG
AGTTCTATTTTTGTGGGGCAGGTGGTTATTGGAATGGATGTTGCTGCTTCTAAATTCTAC
AGTGAGAAGGATCAGACCTATGACCTTAACTTCAAGGAGGACGTAAGATTTCCACCTTGC
TCTCCTGTTCTCCTATGCTCAATCGTCCTTTGCGCAACTGCAGATAGATGAGTTTGTGTG
TTTGTGTGTCACATTCAATGAAAAAACAGGCCTAACATATATTGTCTAACATCAAATGGC
ATAACTGAACAGAACAATGACGGTTCGCACAAAATCTCGGGCGACAGCCTGAAAGATCTG
TACAAGTCCTTCGTCTCCGAGTACCCTATCGTGTCAATCGAGGACCCGTTCGACCAGGAC
GACTGGGCCACCTATGCCAAGATGACCGGTGAGGTTGGGCAGCAGGTGCAGATTGTCGGA
GATGACCTTCTTGTCACTAACCCCACGGTAAAGCCCACATATTCACCGGTATATCTCTGG
GTTTGCCAGAGAAAAAACATTCCTACGAGCTTTATTGATGCCCTGTTTGGATTCTGCAGA
GGGTTGCCAAGGCGATCGGTGAGAAGACCTGCAATGCCCTTCTTCTCAAGGTAGCACCAT
CATTCTCTGCCTGAATCCGTTGATTTGGCTTTTGAAAGGAAAGACACTACTAATAATATC
ACTTGGTTTATATCAAACAGGTGAATCAGATAGGCTCGGTGACGGAGAGCATCGAAGCCG
TCAGTATGTCCAAGCGCGCCGGGTGGGGAGTGATGGCGAGCCACAGGAGGTAAAAGAAGT
GCAAATTTGCAAAGTTTGTCAAACTCACTCTTGGCAAAAGGGTTTTGCATTTGCCATATG
AGCTGTTTGCACTGAACATTCTTCCTGCCCTCTGCAGCGGCGAGACGGAGGACACCTTCA
TTGCCGACCTCTCGGTCGGCCTGGCCACGGTATGACGGCACGGCTTTCGGCCGAACCAGA
GCTTGAAATACTTGCACTTTTCATTGCACTCATTCATGGTTCGGTGGTGGCATCGTACTC
ATCTTTTCTTGACTTGTTTGTTGCAGGGCCAGATCAAGACTGGAGCTCCCTGCAGGTCCG
AGCGTCTGGCCAAATACAACCAGGTATATACTCCGTATATGGCATGAAGTTCAGGGTTAC
AGCGGCGACACCATAGCCATCTTTCCACATGCTATATGTTCTGCGTTCTGAATTCCGAGG
CTTCTTGTTTGTGCTCGCTGCAGCTGCTGAGGATCGAAGAGGAGCTCGGCGATGCCGCGG
TGTACGCCGGAGCAAACTTCAGGGCGCCGGTGGAGCCCTACTGAGAAGAAGCCTGCTTGT
TGCATGAGCATGGGTCTGGAGAGAGATGGTCCATGAGTTCTTATGGTGCTGCTAGTTATA
CTATTATTACTGCTGTATTTTGATCCAAGCCAGGCAAAATAAGAGTAGTTCTTCCCTACC
CGAGAGGCGAGAGCTAATGGTTGTGATTACTCAGATTAGTGGCGTGTTTTCGTTCATCTG
AAATAAAACAGTTTCCGGTCTTCTGACTGAGTTCAGGTAATTATTTATTTATATATGCCG
GGAGGATAACAGGACATACCTTATACTCCCTCTGTTTCTAAATATAAGTCTTTTAAGATA
TTTCAATACACACTATATACGAAGGGCATATAGACATATTTTAGAGTGTAGATTCACTGT
ATCTAGTACATATTGAAATTTCTAGAAAGACTTATTAAGGAACAGACTTTGTACCACTTA
TCAATAAACTGAAACAAAATGCATCCAGAAATGAAAATCTATACCACTTGGTACGTATCA
ATTAATTGAAACATGAAACGAGCCCCCCTGATTGCACTCCAAATTGAAATGCCTACTCTG
CTTGGATACCCATCAATCAACTAGTACAATACAAATCGACAACAACATCAACATAATCAA
CGGTGTTTAAAGGTGCAAGGCAGCACAAAACACGAAAATGGCGTCGGTCGGAGCAAAACA
ATGCACAGTTGGGCGCAGCAATTCCTTTGCCCCATATGAACGGATGCACAATCAAATAAA
TAGGGAGTGGCTCCTAACTTACATGTTATGTTACACGCTACAACAGTAGGAGATTTCACT
AGGAGCAAGCAACAGACAGCACCCCGGACATGTTGTCTTCGCCCTTCTGCTTGCGTAGTA
TCTCCAGACACCCTAAATTTATCCAAAAGGCTTTGATATGAATAATAGCGGCATCGGAGT
AGGTGTTCAGCAGGCCACGAGGACCATGTCGTAAACTCGTAATACCTAACTAATGGCTGC
AGAAACAGGTTGAGCTATCACAGTGTTTTTCTCATTCTACTCTTCCTCCTCCAGTACACT
CCAAATCATCCTGAAGACAAACAAAGAAACAAAAGGCGGTTATTTTCCTTCTTTGCTGGT
TGCAGACTTGCAGCCAATAGCAAATAATGTAGGTATGTGTTATGTTTACCAGAATAAGGA
CAAGAATAGGAGGATGGTAAGAGCAGCTATCTTAAAAAGACGACGCTTCTTCTCCCGTGA
AAGATGGTTAAATATCTCTGTCACATCTACAAGATGCTGCCGCCGCTGGTATCTGCAAAG
ACAACAAAAGGTTCCGCTCATTGGCAGCATATAAGACAAAGAATGGCACATGCAAAAACT
TGCAGTGAGAACCTTCTAACCAAGTAGAGCTAATTATGAGTTCAGAAATGGATATAGTAA
GGTTACATGTGACACCATGTGTTGTGCTAAATAAGTTATTCAGGTAGTACAAACAGTTTG
TGTGGGAATAATCTGACAGCAAGTCAGCACTCTGCAACTCCAAGTCAAATATGAGACAAA
AGCAGAATTTTAAGAGTGCAAGTCCTATTCTTAGCTCCGCTGCAGAACATGTATTGCCAA
TTTCAGATTAGGTAATAATTTGCAACTGTATATGCCTAGCTGCTTGTGATTCCAATCAGT
GACGCCATATTTCCAGGCCCTTTAAATAAGACGAAAGCAAAATTTTAAGGGTGCAACAGA
GCATGTATTGCCAATTTTATGTTAGGCATAATTTGCAACTGTATATGCCTATCTGCTTGT
GATTCCAACCAGTGACGCCATATTTGCAGGCCTTTAAATAAACCTACCTTTCATAGATTT
TCACACTAATTAACATGTCGATATTGTAGCACTTAGGTGCATCAATTATTTTTCCAAGAA
CTTAGATCATGAAAACATCTTCAGAACATTATGTGCAAAGTACAATGACTGAAGCAGGAC
AAGATTTGAGTCCTTATCACTGGATATTACTATCAATAAAGTTTGAGGAGCAACAGTCTA
ACAGCACATGAAACAGATGCATCAGTCCTCAGCACCCATTTCCCCATTTTCTTTTAGTTC
TCAATTCTCGCGTATGATGAGAAATGAAGCATGTTACGATATTTCAACTTTCAGTTATTC
TGTTAAACTAGGCATGGTAGGTTATGTAGCAGCTAGTGTTTAATAAACAATATTCCGACC
ACAGCCTAGAGGAACCATATCAATTGTTTTAAAATTGTAAGGCAGCCAGAGGACAGGAGT
CACTTACAATGTATAATTATAGTACACCATTGGGGCAGAAATCAAGAACATCGCCCAATG
CCCAGTTAAGAGGAATAATGCACTTAGAAGTGCCTGCACTATAAATTCTGGCATAACCAC
TTTATTGATTCGAGAGGATGAATCAAACTGGTTGATATAATCGAACTCCAGGTCTGCCAA
GCACATCAACTGTAAAAGAAACATAAATCATCAGCAAAAGAATGACTTTTGGCTAAGCTT
ACTTAGGAATGTTGTTGATTAAAACATTAAACATGAATAAAGAGCCATGGAGATTCCTCC
TAAAGCAAAATGAGCAAGGATGAACAATCCACTTCAGACAAAGCAAAAACAGCCAGGTTC
TGCATTTAATCAGGAACATCAGGAAATGCTAAATGTCAAATTAAGGGCCTGTTTGGGACT
GCTTCACTTCATCAAAATCAGCTCCGCTTCATCAAATCCACTTTAGAGCAGTTTCATATA
GGACTTGCAACCATTTCAAGAGAATGTTTGGCTCTCATTTAGCTCCAGCTTCACGGATGG
AAAATTTGGTGAAAAGGATCTATTTGATTGGATGAGAGGTAAGAAACGAAGGGGTATCCA
CTTAC