Contig Data
morexGenes
Links



Map Locations of contig_2547775 (5426 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547775

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_37098 2 4076 bp MLOC_37098.1 Available Available LOC_Os04g48760.1, FRAME:+1, EVALUE:0.0, 13104.m04968 protein leucine-rich repeat family protein, putative, expressed





CDS Structure of MLOC_37098






Contig Sequence (5426 bp)

>contig_2547775 5426 assembly3_WGSMorex_rbca.fasta
CATGGCCGGCTGGGACGCGTCCTCGCCCTCCGCGCCCTGCTCCTGGCGCGGCGTGGCGTG
CAACGCCGCCTCCGGCCGCGTCGTCGAGCTGCAGCTCCCGCGCCTCCGCCTTGCGGGCCC
CGTCTCCCCCGCGCTCGCCTCGCTCCGCCACCTCCAGAAGCTCAGCCTCCGCTCCAACGC
GCTCACGGGCGCCATCCCGCCGGCGCTCGCCCGCCTCGCCTCGCTCCGCGCCGTCTTCCT
CCAGGACAACGCGCTCTCGGGCCCCATCCCGCCCTCCTTCCTCGCCAACCTCACCGGCCT
CGAGACCTTCGACGTCTCCGCCAACCTCCTCTCCGGCCCCGTCCCGCCCGCGCTCCCGCC
CGGCCTCAAGTACCTCGACCTCTCCTCCAACGCCTTCTCCGGTACCATCCCGGCCGGCGC
CGGCGCCTCGGCGGCCAAGCTCCAGCATTTCAACCTCTCCTTCAACCGCCTCCGGGGGAC
CGTGCCGGCGTCGCTGGGGGCCTTGCAGGACCTGCATTACCTCTGGCTGGATGGCAACCT
TCTTGAAGGGACCATCCCGTCCGCGCTCGCCAACTGCTCGGCGCTGCTCCACCTCAGCCT
GCGGGGGAACGCGCTCCGCGGCATCCTTCCGGCCGCGGTCGCGTCCATACCGTCGCTGCA
GATTCTCTCGGTGTCGCGCAACCTGCTCTCCGGCGCCATCCCGGCCGCGGCGTTCGGCGG
CGAGAGGAACTCCTCGCTGCGCATCCTGCAGCTGGGCGACAACCAGTTCTCCATGGTGGA
TGTGCCGGGTGGGCTCGGCAAGGGTCTCCAGGTCGTGGACCTGGGGGGCAATAAGCTTGG
CGGTCCGTTCCCCACATGGCTCGTCGAGGCCCAGGGGTTGACGGTGCTCAACCTTTCTGG
CAATGCATTCACCGGCGACGTGCCGGCGGCGGTCGGGCAACTGACTGCGCTGCAAGAGCT
TCGCCTTGGAGGCAATGCTCTCACTGGCACAGTGCCTCCAGAGATTGGCAGATGCGGTGC
TCTCCAGGTGCTTGCTCTGGAGGACAACCTCTTCTCCGGCGAGGTTCCTGCAGCTCTCGG
CGGCCTCCGGCGGCTCAGAGAGGTCTATCTTGGTGGGAACTCGTTTGAAGGCCAGATTCC
GGCTGATTTGGGGAATCTCTCCTGGCTGGAAACACTGTCAATACCGAACAACCGGCTCAC
TGGTGGCTTGCCCAATGAGCTCTTCTTGTTGGGCAACCTGACAGTCCTTGACCTCTCTGA
TAACAAGCTTGCCGGTGAGATTCCTCCTGCAGTTGGCAGCCTGCCTGCTCTCCAGAGTTT
GAATTTGAGCGGCAATGCTTTCTCAGGCCGCATTCCGTCGACAATTGGCAACCTGCTGAA
CCTGCGAGCTCTTGATCTCTCTGGTCAGAAGAACCTCTCGGGCAATCTCCCTACAGAGCT
TTTCGGTTTGCCACAGCTGCAGCATGTGTCGCTCGCCGACAACTCGTTCTCCGGCGATGT
TCCAGAAGGGTTCAGCAGTCTGTGGAGTCTGCGGCACCTCAACATTTCTGTCAATTCTTT
CGCGGGGTCAATCCCGGCTACATATGGGTACATGGCATCGCTCCAGGTGCTCTCGGCCTC
CCACAACCGCATCTCCGGCGAGGTGCCAGCAGAGCTCGCCAATTGTTCCAACCTCACTGT
GCTTGACCTCAGTGGCAACCATCTCACTGGCCCAATACCGAGTGACCTCTCCAGGCTTGA
CGAACTCGAAGAGCTTGACCTCAGCCACAATCAGCTGTCCAGCAAGATACCACCAGAGAT
CTCCAACATTTCCTCACTAGCCACTCTCAAGCTTGATGACAACCATCTTGTCGGGGAGAT
ACCGGCCTCTCTCGCCAACCTCTCGAAGCTGCAGGCACTTGATCTGTCATCCAACAGCAT
TACAGGCAGCATCCCTGTTTCATTGGCTCAGATTCCAAGCCTTGTGTCATTCAATGTGTC
ACACAATGACCTTGCCGGAGAGATACCGCCAGTGCTCGGCTCCCGCTTTGGCACGCCCTC
GGCATTTGCTTCCAACCGAGACTTGTGTGGTCCGCCATTGGAGAGCGAATGCGGTGAGTA
CCGGCGGCGCCGCAAGCGACAGAGACTGCAGCGCCTGGCTCTGCTGATTGGCGCCTTGGC
TGCTGCATCACTGCTCCTCCTGTTGCTGTGCTGCTGCTGCGTGTTCAGCTTGCTGCGGTG
GAGGCGCCGGTTTGTTGAGCGGCGTGATGGCGTCAAGAAGAGGCGACGCAGCCCTGGACG
GGGCAGTGGGTCGAGCGGCACAAGCACGGAGAGCCAGACGAAGCTGGTCATGTTCAATTC
CAGGATCACCTATGCAGACACGGTGGAGGCGACACGGCAGTTCGATGAGGAGAATGTGCT
TAGCCGTGGCCGCCATGGCCTCATGTTCAAGGCTTGTTACAGCGAAGGGACCGTGCTGGC
CATCTTACGGCTTCCTTCAACCTCAGCTGATGGCGCCGTGGTGGTCGAGGAGGGCTCGTT
CAGGAAAGAGGCCGAGTCTCTAGGCAGGGTGAAGCACAGAAACCTCACCGTTCTCCGTGG
CTACTACGCCGGGCCGCCGCCGGATGTTCGTCTGCTGGTATATGACTACATGCCCAATGG
CAACCTCGCCACATTGCTCCAGGAAGCATCTCACCAAGACGGGCACATCCTCAACTGGCC
AATGAGGCACCTCATCGCCCTCGGTGTCTCCCGCGGCCTCGCGTTCCTCCACCAGTCCGG
CGTGATCCACGGAGATGTCAAGCCACAGAACATACTCTTTGATGCCGACTTTGAGCCACA
CCTGTCTGATTTTGGGCTTGAGCCGATGGTGGTGACTGCGGGTGCCGCAGCCGCCGCCGC
CGCTGCATCAACGTCGGCTACGACACCGGTTGGTTCTCTTGGCTATGTCGCCCCAGACGC
GGCGACTGCCGGACAGGCTACAAGGGAGGGCGATGTCTACAGCTTTGGCATCGTGTTACT
GGAACTGCTCACCGGCCGGCGCCCCGGCATGTTCGCCGGCGAGGACGAGGACATCGTGAA
GTGGGTGAAGCGGCAGCTGCAGTGCGGGGCAGTGGCCGAGCTGCTGGAGCCGGGCCTGCT
GGAGCTCGACCCGGAGTCGTCGGAGTGGGAGGAGTTCCTGCTGGGGATCAAGGTCGGCCT
GCTCTGCACCGCATCCGACCCGCTGGACCGTCCAGCGATGGGCGACGTGGTGTTCATGCT
CGAGGGCTGCCGCGTCGGCCCGGACATCCCCTCCTCCGCCGACCCGACCACCCAGCCATC
CCCGGCGTAGCCTCCTCCGGCATCCCCTCAGCCGGCATTGTCAGATTCAGTTCAGTAGCT
TGTACTCTAGTACCATTTTTTCCCGTAATTCTTTTCTTAGTTGTTCAGGTTAGCGTTTGG
CGCCTCGGCTGCATGTGCCCGCCAAGCGAAGCAAGTGGGGGGAGAAGTAGCCGTTGGGGG
TCGTTTCTAATCTCGTCTCGTGGTTAGGGGCAGGTCGTCAGATGGCCATGTGGGTGGTGC
TTGGCATGATGCTCCTGCCATGGCAATGTCGCTGAGCTTAGTGGGCGCGCATGTGGGGTT
CACGCCGCAGCAACGGCTACTGATTCAGGATACGGTCGTGTCTCCTTGCCATCTAGGAGG
AGTAGTATTTGTTGCCTGCTCTGTACTCTCTGTGTACTCTCTGTTAGGAAATTGATTCGT
GTAGGGGCCTGCTTGGCTTCTTGGGATCTTGTCTTAATACCATTTTTACAAATGCATGTC
TGCGGGCCAGATCTTTGTAACGTCGCGCTGTGCATTTTGTCTGAATCTTGTTATCTATCT
CAATTGGCAAGGGGAATGATAATGATGATGATGCTTCATGACCGTTAACTTGTTGTTTTC
CTCTGCACAAATTAAATGATTAGTAGTCCAGATCTTTGCCCTCGTGCCCTGGATAATCAG
AACGGGGCCTGCTTATCCGTTGTCCGGCTGGATGGATATGCTTTCTCTTAGTGCACCTTG
TTTATTTACTATGGCAACTTGGGGGGAAGAAGTGAATTGGAACAGTGTACTGGCTTGGAA
GATGGCCACCGCCGCTGTACGTTTATTTGGCGATTAGCGGGAGATCTTTGTATAACGGCA
CCCCACCGTCGTACTTGCCTCGAGCATCTAATTAGGTTGGCGCACGGTCGTATGGTCACT
GTTGCCGCGTATTTAGGACCTGCATTATGTCAGTTAATGAACTGTATGTGAACTTTAATG
TGCATTCAAGGGCGCATGGCATTCGTGTCCACTGTCGAGGACAGCCAGTTTTCCAGTTTT
GAAAGAGCGGATGCACCATTAGGCCATCAACAGTTTGTTGGTTAGCTTGTTGGTAAAATA
TGTCATGTCATCAACCAACACTTTAACATACAACTATTTCAATAGATTGTATCTAGTTTA
ATTAATAGGGTGTGAGATAATAAATAAGGTGCTCTCTTATTCTACATTGGATCTTGTGTA
AGGGTGTTGGTTAATTTACATACAACCTTTCTCTCTTTTTATTTATTGCATGACCCATCA
TAAAAAATCTTAGGTGTCAAAATCCAGCAACAACCATCTTACAACGGCCCTGTTTGGATA
CTCTAANNNNNNNNNNNNNTAGAGTTAGATTCTAACTCTAGACTAACCCTGAACTAACCC
TAACCAAAGAGGTGTTTGGATGGAAGGGTTAGATTGCCAATAAATACAGTTTTTCCAATC
ATTTGACTCCTTTATCTAGGATTTTATGTGGTGGAGGGAGAGAAAAGTAACTTTTTCTGG
GTCCACCTAACTCTAACCCCAAAAAGCACCTCTTGGGTGGGTTAGATTTTTTGGGTGGGT
TAGGCTGGTTGTAATGGTTAGTATCATATACTAGTATCATGCATATGATACTAGTGTATG
ATACCACACCTGTAATGCATAGTATCATATGTTAGTATCATAGATTAGTTCATTTATTGC
CATGCAAGACACACAGTAGCACAACATTTAATATGATACGGTATCATGCTATGATACTCA
ACCCTCTCTTTCTTCATTTAATTTTATGACACCTCATCAAAATTGCCTAGTTGGTATGCA
TGATACTACCTACGATACTACCATTACGAACAACCTTAGATGCATCTAACCAACTCTAAC
CCACTTGTTTGGATTTTTAAGGATTAGATGAGTTCCAATCTAACCAACTCTAACTTTAAC
CTTAGGATCCAAACAAGACCCTAAGAGCAAGTACAATAAGATACAGTCAGCAGGTTTTTA
GGGTGCGGGGAGCTTCGCCGCATTGCAGTCGTCTCCCTCGTCGCCGGCAGCCTTCCCCGT
GGCATCCAAGATGTCCATGGACTCGAGGGTGCCTCCCTCGTTCCATTCCCATCGCTAGGG
TGACCGGTGGGCCACCACAGCGACGG