| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2547732
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_37076 |
2 |
1527 bp |
AK366066 |
Not available |
Available |
None |
CDS Structure of MLOC_37076
Contig Sequence (6639 bp)
>contig_2547732 6639 assembly3_WGSMorex_rbca.fasta
AAGCCATAATAAGAATGGGTGTGGGCAAAATCCTACTCATTGAGGAACCCCTTATGATGG
AACGAGAAGGACAATGTTCTACGCAAGTGGAACAATCAACGACACTAGATCCACGCGCTT
CCGACAAAAAAAGTGAAGGCCCTCAACCAAGTGAACAAGATCAAGGGCAAGATCAACTCA
TGATGATGGTGGCGCACCAAGTGATGCCCAAGATCAAGATCATGACCTCGAGCAAGCTCA
AGATGATGCTCAAAGTGATCAAGATGATGCTCCTCAAGGATTGCTTGAAGAACAACTAGA
GCATCGTGCCGCCAAGATTGATTTCCACCTTAAAAAAAAGTGGCACATTATGGAGAATTT
CATAGGAAGCTTGATAAAAGGGGTAACCACTCATAAACAATTAACAAACTTCATGAGCAT
TATGTGTTTGTTTATTAAGTTGAACCCCAAAAGGTCTATGAGGCGCTCAAAGACCTGGAT
TGGATAGAATCCATGCATGAAGTGCTAAACAACTTTGAGCGCAACAAAGTGTGGTAAAGG
ATGGAAAGATCCAGGAAGAATCATAATGTCATTGGAACCAAATGGGTCTCCAAGAACAAG
AAAGATGCTCATGGTATTATGATTCGCAACAAGGCTAGATTTGTGGCTTGATGCTACTCC
AAGTTGATGGAGTCGACTAGGGGGGAAGTTTCGCTCCCACTACTCGTCTTGAATCTATTC
GCACATTGCTTGCACATGCTTCTCATCATAATTTTTTATTCCAAAAAATAGATGTGAAGA
GTGCATTATTAATTTTCCTCTTATTGAGTTGGTATATGTCAAACAACCCCCAGGTTCAAG
GATCCCAAGTTCCCCAATCATCTATATAAATTCGATAAGGCGCTCTATGGCCTTAAACAA
GCTCCACGTGTGTGTTATGAGCACCTCACCAAGTTGTTAGAAGATCGTGGTTTTGAAATT
GGGAAAATCAATCTCACTCTATTTACTAAGAGGTTCAAACGGAATTTGTTCATATGTCAA
CTATATGTTGATGGCATTATCTTTGATTCTCCTAACAAAGCTTTCAATGATGAGTGTGTC
GCACTAATGAACGAAAAGTTTGAGATGTCTATGATGGGTGAGCTGAAGTTCTTTCTTAGT
TTCAAAGTCAAACAACATACAGAAGGAAGTCAAACAATGTATAGAAGGAATATTCATCAA
CCAAGCCAAATATACCACAGACTTCATGCATGGATTCTATCCAATCCAGGTCTTCAAGCT
AGGTCTTGACATATATGCCAACAGGTCTTCAAGCTAGGTCTTGGCATATTTGGCTTGACA
ACGTACAGAAGGAACATTCATCAAAAGGTTCAAGCTAGATGATGTCAAGATGGCTAAGAC
TCATATGCCAACCAAATGCCACCTTGACATTGACCCCAATGGTAAAGCAGTGGATCAAAA
GGTGTATCGTTCCATGATTAGATTCTTGATCTATATTTGTGCATCTATACCGGATATCAT
GTTCACTGTGAGAATGTGTGCACGACTTCAAGCCGCTCCAAAGGAAAACCACTATGTGGC
GGTCAAAAGAATCTTTCAATATTTGACTCATACCCCAAACTTTGATTTATGATACCCTAA
AGGAGCAAGCTTCGATCTCACGGGATATCGGATTCGGGTTGGGCGAGAGACCAAGTGGAG
AAGAAGTCCACTTCTGGAGGGTACCATTTCTTGGTCGCTCTTTGGTAAGTTAGTCTTCCA
AGAAGCAAAATTGTGTGTCTCTCTCCACCACTAAAGCCGAGTACATCGCCCTTGTAAGTT
GTTGTGCACAATTACTATGGATGAGGTAAACTTTAAAGGATTGCGGTGTCATGCGTGACA
AAGTGCTTCTTCTATGTGACAGTAAAAGTGCAGTCAAGATCGCCTACAACCTCGTGCAAC
ATAGCAAGACAAAGCATATTGAGATTTGTCATCACTTCATTCGAGGCCACGTCAAGCATG
GGGATATTAATCTTATATATGTAGGAACCGGAAAACAACTAGCGTATATTATTCACGAAG
CCATTGGATGAAGGAAGATTTCGTGAGTTAAAGACATGAGTTATATCATTGATTTGAGCA
ATGCGGTTTGAGACATTGCACTCATCATTTTATCTTGTTCTAGATGTAGGCATGGACATA
GTGGGAGTATTGTTCATCTTATGAACTCTCACTCCTCTTGTTTTGCATGAAATGAATCAA
TCTTTTACATTGGCCAGTTATGATGGTGCTTGTGCTTTAAAACTGAGTTTTGGTATTGGA
CCCAAGGTTAAAATCTTCACGGTGCCAAATCATTTGGCTCAAACAAACGTGGCCTCGGCC
ACCAACCTGTTTTGATGGGGTTTGGTTTGTGTCTGGATGTCATTTGCTTTTGCTAGACTT
GATAGGTCCTAGTTGTTTGTGAACTTGAAGTATTGGGCTTTATCGTCTGCTTATTGTAAT
CTTGGAGTGCTCGTCACCATATTCGAGTACCTTGTCTCCATCCCAAGCTTGAACCCTGAT
GTCGAATTGTACGAGTTTCTCCTTCATCGTGACGAGATCCTTTGTGAGGAGTTGGATTTC
CAATGCATCATTCTACACAAGTAAAAAAATAAAGAGAGTTCCTGGTAGGGACGCCCTCGA
ACAATATTGGATCATTGGTGAGCCCGGCGGTTTCCTTGGTCGATGTTGTAAAAAACAACG
ACAAAGTTCCAGGAATAAGGCGAGTAGGCTTGAGAGATTGGCTTCGTCATCAGAGCCCAC
GTGCTAGAGTGGGGATGGCATCTACAGACGGGGTCGGGGCTCAAGAGGACGAGCTGGCCA
TATCAACGACCATCGAGTGTTGCGGCCCGCAAAGGAATCGTACTCCCTCCGTCTCGGTGC
ATTAGGCATATTAGAAGGTGCACTGCAACCTAGGCACGTAGAGATTGGGTAGGAGAAGAA
ATTAAATGGTAGAGGAAGTCAATCACACTATTCCTTTCTCAACTAAAAACATGCTATTAA
CTAGAAGACCTCTTTAAATCCAAAAAACATGACGCATAAATTGCATACATTGGTCCTTCA
ATTAATAGATGGGGTCTAATTAATATGCATGCAACTAGTACTACTGTAATGTGCCTTAAT
GTTTTTGGATTATTTGATTTTCATAAGATGCCTAATGCACCGAGACAGAGGGAGTAGTAA
AGATTGAATATAAATTTGAAATGGCAGTGCTTTGCAGTATGGGTGGAAGGCACTTACAAG
GTTACCGTAGGTCTGGCCCAAGGTTTTAGAACTGCGGGCAGTGCCACCGTCGTCTGGCCC
TGCACGGTAGGAGAAGGGGCGGTGGTGGCAGGCACGCCGGCATGTTGTGGTGCCTTGTCT
TGAAGCATCTTCTAAAGCCATGCGTCCTCGGGCGGGACCTGAGTGGCGACATCGAAAGCC
AACGTACTCACACCAGGGGCACGCGTAGCAGCTCGTAGCTCTCACGCCCGGCGTCGTTGC
TATGAATCGTCGACGTCGTTGTGGTTGTCTTCGTCATCATCATCCAGTTCGACCTGGATG
GCGGCACCACGACGACGCTTTGTGGTCCTGGTGGTATCCTCGGCCCGGTGCCGATCCAGA
CCGTAGTCTGGTATGGGGTTAGAGAGTTGACGTTGGTCGCCCATGCACTCCACGGCTGCA
ATTATGAGTAAATTGCGAGAAAATCTGAAGATGGTAATGATTGTCAAAGCGGAAAAAAAA
GACAAGTGCTTACCCCTTGCATAGGTGTGAGGGTGAAAAATCTGGCATTGGTTGGCTCGT
TAGGGAAGGAGGTCGCATTGCCTGAACATCAACGAGAGAATCCTCAAGGGTTTGTGTGAC
CATGGATTACCCAAGTAGCGTCATCCACGCCGTTGTATTCCCACAGCGGATGCACCCAAT
CTTTGAGTGGTTGGATCCCATGGCCAAGGGCCACAAGCATTACATCCACCTTCTCGGCCT
GCCCGATGACCACAGGGGACTCCTGCACCATGCTAATCCTTGGTTTCCAGGAGTGGTGTC
TCTCGACGTGAAGGGGGTGATGTCGTGATGATGCCAACATGAAGAGGGTGACAATGCCCG
CTCAAGGAGGCTCTTTGAAGGGCACACCAAGATTGTAGAACCACTCCTCTTGCCAGTTTT
TGTTTTTGTCCACAAAAACGCCCTTCTTGTACTCGACCTCGGCAATCTTGTTGATGTTGG
CGTCGTCGCACTCACACGTCTCATTGACGTTGGTTTGTAGTTTCTTGCACGACGACAAAA
CATAAACATTCATTCTCCTCCATGGGGGTGGTCTCTTGCACAAACAACGTCGTTGACATA
GTGAGCCCAGGGAAGAGTGGGGGTGGGGGTGTTCTCTTGGGCGACTGCGTCGTAGACATA
GTGAGCCCAGGGCATGAATACGACATAAGGTCCATCGTTGGAAGGTTAGCCAGCTAAGCT
GAACGCACTCCACAGTAAGTCCTTCCAATTGCATGTTGTGGTGGACCTGCCCATATCAGA
CGGGCTGGTTAGCCTTCCATAGCTTCGTTCTCCAGCCAGCCATGGCCTGGGTGGTGGTGC
ACATGAAAGGAGAAAGCTTTGCAGAAAGCAATGGGGCTTTCGCTCAAGATTGGGACTGCA
AGGGAAACAGACACCGGAGATGATGCCAGCATTGCTTCAACAGGCACAAGCAAACTGTTC
TCCAAAATTAAACCAGCAGCATCAACAGACGGAAATCCATGAATGTATCATTTTTTAATC
TCAATATTTAAACAAATATAAGAGTACAATATGTTGAAATCCACAGTTAAATCTATTTGA
ATAAAACTAGAGACTTCCAGAGTCTGAAGCACCAAGCACATACAGTAACCAGGAACAAGC
AAGAAAAGTTCCAATTAAGAAGCAACAAAGCCATCGCTCAACGAAAGAGCAGCCAGCTGA
TCAGCTGGAACATTGGTCTGCTGCTGCTGAGCGCTGCGGAGAACCTCCATAGCTTCAGCG
ACCTTAGACTTCAAAGCATCAGGTGACTCGATTAGATGAAGAACCTCAGTTTGGTCCATC
TCCAAAAGCATACCGGTAACCTTGGCAGCCTGATCATGCTCCAGCTGATCAACAAGTGGA
TACAAGCTTTCACCAAGCATCTGCACAAATTACGAGTTATTTCCAAGTTCTCAACGCCTA
ATCAATTGATGCAGACAAAGGTAATAAACAAAACTAACCAGTCGTTGCTGCTCCGGCGGA
GAGTTGGCAAGTGCAGATGCCAATGCTCCACTAGAAACTTGCTGCGGTGCTCCAGTGTCA
CCAGGAGTCATCCTTCCCATCTCATACAGAGATGGCGCCATACCTCCAACACCACGGAAT
GCAGCCTCAGGCATGCCACGGCCCGACGCATAACGGTAACCACCACGACCGCCCCTTGGA
ACCATCTGCAGTGACAAACGTTTAACTCAGCTGTTCAAGTATGGAGGCAGAAAATAAAGG
TCGTATTCCTTTGGAAGGAAAAGAAGAACTATTGCCTGCTGGTGACCCATTGGCATTGGC
TGCTGCATTCCACCAGCACCTGCACGCCTCCCAGATGGGCGTTGTGGTTGTTGACCTTGC
TGGACCATTGGCATGACAAAATTTGGCATCGGAGCAACACCAGGTCTCATTCCAGGAATC
ATATGTTGCTGGAAACCATATCCAGGCTACAGAAAGAGAGCACATTAAAATTTAACTATC
CAAGTGAGAAAGAAATAACAGAATATTTGCAACATGGATGAAATTTTCTTAAGCAAAAGT
TAATTTGTTCATTTGATCAATGTTCAACCGTATGGCACATCAACCTCCTATGAATCCAAT
CATAAGAACTATTAGACTTGAGGGGAAAAAACAGGCAACTTGTGATAATAAAAGATGATG
TTTTCGTCATTTATAGGAATACAAGGGGCTAGTAACATCCCATTCCATGCTATGAGCAAA
AGGACAAGTGTACAGTAAAATGACGTCAACACTGATCAGTGAACCTATGGAGCAACCAGA
AACCAAAAAATATGTTGCCAATAACAAGCAAAACGACTTCTATTGTAAATATAATATGAA
CAGAAGAAACAAACCAAACTTAGATGATAGAGCAATTTAAGAGGAAGAATGCTCCTGGCT
GGGAACATGGAGATGAAGTTGATCACGAGAAGACAACAAGATGCAAATATTGCCTTATAG
TTAAAGAGGTGTCTACAGACTGAAGCATCATTTGGCTGGACAAGGTTTTAATGTTGAGGC
TTGCAAAAAAGTTACAGTGGTACAATTATGTCTGATGGCTGGACAGATGAAAAGAAAAGG
TCCATATGCAACTTTTTAGTGAACAGCCCAAAAGGTACGATCTTTCTTGCCTCAGTTCAA
GACAGCCGACGAAGTATTTGAAATGTTCAATGATACTGTTGAGGAAGTAGAGCATAATGT
TGTTCAAATTGTAACAGACAATGGCGCTAACTATAAAGCAGCTAGTTAGTTGTTGATGGA
AAAGAGAGACAATATTTTGGACTCCATGTGCAGCTCATTGTATTGTGGTGGGCCTTGGAG
AAACACAAAGTCCCAGCAAAGTACATTACCCTCATCAAGGACATGTACAATAATGTTGTG
ACAAGTGTTCGAGCAAGTGATAGCGACACTGATGACTTT
