morexGenes - Barley RNA-seq Database

Contig contig_2547728

Source Contig contig_2547728

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2547728 (2299 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2547728

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_37070	1	815 bp	AK374683	Available	Available	None

CDS Structure of MLOC_37070

Contig Sequence (2299 bp)

>contig_2547728 2299 assembly3_WGSMorex_rbca.fasta
CACGGCGTCCGAGTCCACCCACCAGAACCACTCCGCCTCCGGGTGCGCCACCATGGCGGC
CCGGACCACCGGGATCTTGGCCCAGTACCGGTCCATGGACGGCCGGAGCAGCGCCGTGTT
GTACAGCAGCTGCACGCCGTTGAGGCGGCAGTAGTCCGCCTTGTTCTTGAGGAGCCGCGT
CAGCAGGTGGTCGCCGGTAGGGGAGCGGCACGGCGCCGGCTGCGAGCCGGACACCATCAG
GACGCGTCCCTCGCCGGCGCCGGCCAGCTCCGGGTGCGCGCGGAGCCATTGGGCGCGCTT
CTCGTCCCACCCGGTGATGGGACGGTCCACGGTGTACGTCACCTCCGGGTCGTCGTAGAA
GGTCCGCCGATCACCACCACCAGCAGCAGCGGACGACGACGACCGTCGTCCCAGCAGGAC
GGCGGGCGGAGTGAAGGGCGAGGACAGCGTCAGCAGCAGCACGGCGGCCACCGCGGCGCC
GGCGGAGAAGAGGAGCGCGTCGCCGAGGAGGGAGCGCGCCATGCCGGTGCCAATGCCAAG
CAGAGCAGCCCGGTGCGGTGCCGTTGGCCGTGCCGGGGCGCCGTACTTCTAGCGCACCGC
AGGCGCGGCGGTGGCATGCATGGCGCGTACTGGCTGGCTGACTGGCATCGTGAGGCGAGC
GCGGGGTGAAGGCCGTGAACATATAAAGTCGCGCCCGCGAGTCGTTTAGCCGGTGGCACG
TACAGCGTGCGTGCCTGGGGCTGGCATGCATGCGTCCAAAACTCCAAACGCGATCAACTC
CAATCGATGGAGGCGCATGCGTCGTTGTGTCCGAGTGAGGTGTACCGTGTACTGGGATGG
GTAGCAGATGGAAGAGGGCACCGCCGCAACCGCAAGCAGGCGCCGCTTTGGATCGTAGGT
TAGGACCCTTTTTTTCCTGAGAGGGGATGGAAATGACAGCCGCATTTTGGTTTGTTTCAT
TGCATAATAACAAACCGAAACTAACAGCCAAAAGGTGACGGCCGGCACCCGGCGGTGACC
TGCCTGCCTGGCTCCACGGCCCGCACACAACAAGATCGCTTGACTTGTTGCCTCTTCTTC
CTTCTTTCTTTCTTCCGTGATCAACTGTCGGCACCAGATAGATAGAAAGGTACTTCCATG
TTCCTCGATCAACTTTTCACTTTTGCAACGTTTTTTGTACTCCGGTTCTGAATTTGAACT
GAAGGAAGCAATCGATCTTGCACACGGAGAAGAACGGGGCATGGGAAGGGAAAGAGCGGC
ATGGTAAATCGTAGTGTGTGTGTGTGGCAGTAATCAACTGAGCGAGCGCACGAGGCTGGC
TTGTCAAGCGTTGCGCTGCATGAGCCGTCGCCAGTGCACGACGAGATTCCGGCTTTCTGC
AGCCGCTGTGAGCCTGTGACTGCCTGCCGAGCAGCCAGTGGCCATGGAGGGCTGCATCTG
CGTGCGCGCTCAGAGGGAATACATGAGAGCAGAATTTTGCGTGTGCATGCATCATTCATG
CTCATGCATGCCATCGCTGTCGAAAAGCCCAAAAGCCCGCGACTTGAGCATCGACGACCC
ACTAGTCTGCTACACCCCCAGTGATTCCTTCCGACCACACGAACCTGTGAACAATATCAA
CTAAGAGCATCTTTAGTTAGATTGGGCTATAATTTGACCCCTCATACTGTCCGGACGTCC
CCCTTTTCCAAAAAAACTACGGCCCGAACGTGTCTGCGCGCGAACATGCGCAACGAAATC
TCATTTATCCGTGCAACCGAACATCTCAAATTGTTTGGACACATACGTGTGACTGATGGG
GTTGGTTCCGCCGAGCGGACAAAATCGGAGGCCCTATACAAAATCCTAAACTGGGCCTTA
TCTCATTAAATAAAAAACTACATAGGCATAGGTATAATAACATAATTCTTAAAAGAAACC
CATAATAATATGAAGTTCATAATAACTTAGATACCAATTGAATTATAAAAAATGTACCCA
TTCTTGGTTGTATTCTCTTTACTTAAACTACATCATTCTTTTAATATTCTTAAATCTTCA
ATAATATCCTCATAAGAAATCTTCTTCAATAGATCATTTTCTAGTGCTATTGTGGCCAAA
TTAGCGAGTCTTTATTGTGTCATGGTAGTGCACATATAAAACTTCAATAGCTTCAGTTTT
AGAAGAATAATAAAATAACTATACAATTTTAGAAGAACTAAATAGCTGGTGGAAATCGAA
ATCTGAAGTAAAGGGCTCACATGATCACTGGTTATTGACGCGATGAAGCTTAAAAAATCG
GAGATTGGGAGATTGGCCC