Contig Data
morexGenes
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Map Locations of contig_2547611 (6151 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2547611

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36991 3 2209 bp AK368252 Available Available None
MLOC_36992 1 983 bp MLOC_36992.1 Available Available LOC_Os05g41200.1, FRAME:+1, EVALUE:8e-67, 13105.m04369 protein OsCML9 - Calmodulin-related calcium sensor protein, expressed





CDS Structure of MLOC_36991






CDS Structure of MLOC_36992






Contig Sequence (6151 bp)

>contig_2547611 6151 assembly3_WGSMorex_rbca.fasta
CTCTCCCGCGCCCGGCCGGATCGTGCTCGGGCGGCCCCCGATCCGGCCGAATTGGGTTTT
TGTCCCGGAGCGCTGTGGCTAGGGCTCTAGATCCGGGCGGCCATGCCTGGGCTGTGTGGT
CGTTTTAGGACTTTCGCGTTGTTCTGGCCCTGCGCGGGATGGATGCTTGCATCCGGTGGG
ATCGTTCGTTTGCTCTGGCTAGCTGTTTGTTCTGTGCCCGACTGCAGGCCGTTTGTCTTG
TTGAGGCGATTCGGTTCATGGCTGTAGGATTTGGGGCTGCTCCTGTGCGAGGAGCAGCGA
CTGGCTGCATTTAGGAGCTAGGGTTTAGAGCTGTCGAGTGTTTCGGAATTTGCAGTGATA
CAGATGCGAATCAGGTTGTTCTTCGTGTACTACCACAAACAACAAAGGTTAAATGCTCTA
GCAGGGTAGCACGAGTAGCTCTTAGGCATTCCCGTTGCTGGTAGTTGGGCCAGTTGAGGG
TTCTGTGTGGTTTTTAATGATAGGGTCGAATGCACCAACGGTTGGACCTGATGGACAATT
TGATGCGTTGATCTGGTTGTGATCTACAGTACTAGTGGCTGCTTGATGTCAAGGATTAGT
AAGGATTCGGGGTTGCGATTAGCTCTCCTTTGTATAACCTGACACTCAAGAGACTTTGTG
GTTACAGTATGATCTAGCTTCTGACAGCGTATAACTCGGAGATCTAGTGTTAACCGTCTA
GTCTAAGACCAACATTTGATTTGTCGATTCCTCTTTTCTAGTAGTGTCAAAGCTCATTTC
TGCAATATTTAATACTACTCTAGTTATTTCCTTGCTTGGTAGTAGTATGCATGATGACTT
GTTGAATTGTATGTTGACTTCTGATTTCATCATTTGTTAATGAGCAGCAAGAACTACATC
ATTATTTACTTGATGGGATACAACCTGATTAATGCTAAAACCTAAGCATTGCCTTCTTAA
GGCTTCTGCGTGTACGCCGTCCATCATTTCTTCAGATGATCCATAAATTGATTTCTAGAA
TTCAATATGTTGGAATGAACATCAGTGACACATTAGGAATGCGTCTGGCAAGTTGGACCT
ATCTTTTTGTTCCCTCATGTTACCCTGTCGGACTATAATATTTAAACTGTACTGCTTATA
CTGCAAGACAGACACATAGTACTTGTTTAGATCCATGTTTGTTTAAGAACCCCGCCCGTT
GCAACTTGCAGCTCCTTGTGGTTACATTATGTAAGTGGCCAACATGCTGATTAGTGGTAC
TATCATTATGCCATATCCTGTGTTGTTAGGACATTAACAAAGATAGTCCCACATTGCCTA
AACAGACCAATTCTTAAATCCCTGGTAGTTAACTTATTCTTGTTTTATTTCGTAGTGCTG
AGCAAATGCTTATCGATATTTGATTTTGTGCAGGTTGCATCACCACCAAGGAGCTCGGAA
CCGTGATGCGATCCCTTGGGCAGAACCCCACGGAGGCGGAGCTGCAGGACATGATCAACG
AGGTTGATGCGGACGGCAACGGCACCATCGACTTCCCAGAGTTCCTGAACCTGATGGCGA
GGAAGATGAAGGACACGGACTCGGAGGAGGAGCTCAAGGAGGCCTTCCGCGTGTTCGACA
AGGACCAGAACGGCTTCATCTCGGCTGCAGAGCTGCGCCATGTGATGACCAACCTCGGGG
AGAAGCTGACGGACGAGGAGGTGGACGAGATGATCCGGGAGGCGGACGTGGACGGCGACG
GCCAGATCAACTACGAGGAGTTCGTCAAGGTCATGATGGCCAAGTGAGGGGGGCGGGGCG
GGCCCTCCCACGGAAAATAAGCTTTAGTTTGCTCTCAAGTGGATTGGAAATTTGGAAATG
CCAGACAGACTCGAAAGTTGTATTTTGTGCTGTGTGATCGTTTTTTAAGCACTGTTGGGT
AGCTGGTGGGGTTATCTCTGTGTAGCGGTGTAGTCGTGTGGAGCAACATTGGATTACCTG
GTTTCTTTTGGTTTGTGGCACTCATCCTGCGCCTGTTTGGTCTCTGTCTTGTCATGGGAT
TTAGGGTCTCTGCACCAGGTTGTGCGGGATGCTTGCTTTATTTGAATGGGGGCGTTTGAC
AACTCGGGTCATAGTTTTCGCTGAACTTCTCTGCGCTCGCGCTTGTTCCTAACAAGTTCG
GATTTCTTTAGGAGTTCCTGTAGTCTTTTACGAACAAAACTAATAAAATGGGAAAAATAA
TAATGACAAATGGTGGAATGGATGGCGTTTAAGAACTTAGTTTTCGCTGAACTGCTCTGC
GCTCACACTTGTTCCCAACAGGTTTAAATTCGATATATTTTTTGAAGAAAACACAAATGC
AGAATACAGGTTGGTATGATTGAAATCAATAATTATGGGAAATGGTGGCCACGACAGCGA
AACCAAGAGTTGCATTGTTTGAATCTCGACAGGGTAATGGTGCCAGGCTGCATGATCGGG
GCTGGGTTGGCTGCTGCCTGGCTCAGCGATTCCCCGCTGTATTATTTCCACGGGCGACCG
GAATCACTGGTCACTACTTGTATGTTTTGTATGAACCAGTCCGAAGGTGCGTGCCAGCTC
CTTGAAATTATTCCTTTGTCCCTTCGAAGCTGGCCGTCATTTTCGCTTTTAAATATAAGT
TTTTAAAAAAAAAATCCTAGGACACTACGTAAGGATGTATACAGATACATTTTAAGGTGT
AAATCTATTTATTTTGCTTCGTTTTAGTAAAATCTTGAAAAAATGTATATTTAAAAACGA
AGAAATTATGTACTCCCTTCGTTCCTAAATACTATAAGTCTTTCTACAAGTTTTACGAGT
GAACTACATACGGATGTATATAGACATACTTTAAACTATAGATTCACTCATTTTGCTTCG
TATGTGGACCACTAGCGAAATCTGGAGTAGTATTTAGGAACGGAGGGAGTAGTAAAGTTT
CTCATTTTTAAGATAATAAAAAGGAAATCTTCATGTCAAAAGAAAAGCTTCATCATTACG
AGCAGCCCGGACATGAATTAGGCCAATCAATCAGGCCACTTCCTACCCAACTCCCCTCCA
GCAGCTTTGCTCTGGCTCTGCCATGGCGGCCAAGCTGACCCGGGAGCAGGCGGACGAGTG
CAAGGAGGTGTTCGACCTGTTCGACGGCGACGAGGACGGCCGCATCGCCGCGGGCGAGCT
GGTCACGGCGCTCCGCTCGCTGGGCCAGAACGTGGACGAGGCCGAGGCGCGGGGCTTCCT
CGAGGACGCGGGCGCGGGCGCGGGCGCCGCCGCCGTCGACCTCCCCACGTTCCTGGCCGT
GGCGGCGCGCAAGGCCAACGCCGGCGTGTCGGCCAAGCGCCTGGTCGAGTGCCTCGACGC
CTTCGACGACGACGGGAGCGGCGTCATCCCCGCGGAGCAGCTGCGGCAGGTGATGCTGAC
CCACGGCGACCGGCTGACGGAGGAGGAGGCCGACGAGCTTGTCCGCAAGGCCGACCCCCG
CGGCGAGGGCCGCGTCCAGTGCAAGGAGCTCGTCAAGGTGCTCATGAACAACAAGTGATC
CTCCCGTCGGTCGACGGGCCGAGCGGAGCCATCTTCCCCGCTTCTTCCCTTCTCTGATCG
ATCGATCTGGGGAGTGATGGATTGCTCTTGGGTGATGAAAATGGCGCCATGTTTCTGAAT
CTTGTGCCGTGACGGTGTTACTGTGATGCTGGATCGATGTGAATGCTCTGCGCATGCAAA
GTTCTGGCTGCAATGTGTATGTGTACTGCATTTCTTTCGTTTGTATGTATAATAGTTGTA
CGTATACACGAATCGCATATGTGATGAAGATTCTGCACATGTATCAAAGGCATTGGCAGT
GCAGATCCAGTGCGCTGCTTCCTTGGTTTCGTTAGTGGAATCGGAAGGACTCGAAAATGA
GTATTTACATTCTCCACCGTTTCAATTTACTTCGAATGTTTGTTTCTTGACGGGATTTGC
TTCGCATATCAGTACTGTCTTGAGTTAAACTTCACAAATTTTGAGCAAATTTACAGAAAA
ATTATCACCATCTTTAGTATCAAATCAATACCATTAGATTCATCATTGAATATAGTATCA
CATCATATATATTTGTCGTTGTACGCATATGGAGAAAGAGGTGATATACTACATGCACAG
AGGATGTGTAGATGGAGGGATGTGGCATACATTTAACAAGAGGGAGGAAGAATCCTCCAT
GAAGAGCTTTACTTCTTCTGTTTTGGAAAATTACGAACTTCGTTTGGCAGGCCTTCGCTC
ATATTGAGGTTAGACTAGAAGTGGTGAATCGCCGGCTTCTTCATTTGCCGGTGAATGCGT
AGGGTACGTGTTGGAGCCGGTTGATCCCCTCCCATTTGCTCCGGTAGGGATGTTAGGATT
TGAAGGTAGCAGTTGCATCAATAAATCTCTCACTCTTTCGATGTGTGGACGACGGTGACG
ATCTGGGTTGACACACATGAGCCCGATCTCCAGCACACTTTTGAGTTCACCGTCAAACTG
GCCTCTCAGCCCTTTGTCAGCCGCACAAAGAATTGTATTGTTCTCCTGACATTTCAAGAC
CTTCTCGATAAGGCTGTTCTTGTCATCGGTCTCTATGGTTGGTTTTTCACCGCAGACAAT
CTCGAGCAACATCACGCCTAAGCTGTAGACATCAGATTGCCCACATGTCTTTCCGGGCTC
AATATTTTTCTTTTTAGAAAAGGAGGTTAAACCTTCCGGTCTCAATATATGCCGGGTCGA
TGTATGTTCGAGTCCCAATTATATTCATTGTCGCGCGCGAGGTTTGGGTATGGTTGGCTT
CCGTCACCAGCCCAAAGTCAGACAGTTTGGCATTGAAGTCCATGTCTAGCATTACATTAC
CTGGCTTGATATCTCTATGCACGATGGACTTGGGACACTCGGTGTGGAGGTATGCAAGAC
CGGAGGCAATTCCAATTAGTACGTTGCGCCTGAAACACATAACACATATACTCTGTGTCA
GTCTGTGAGACAAGAATAAGATACCTTGAAGTCGAGCTATATTCACTAGGAGATTCATCT
GTTTAACATGTCCCCAAAAGAGATTCATAGTTTGTGCGTACCTCCTCGGCCAACCTAGTT
GTGAACATGTGTCATCAACCATTACACCGTAGACTTGAGAATCCGAGGCACCAATCTGAG
GGTAAAGATGGTCCTCAAGATTACGTTTCTTCATTATTTCATAGATAAGCAGTAGATGCT
TGTCTTCCTTGCACCAACCCATAAGGCCCTGATCGGCATACCGTTTTGTGCACAATACAT
CTGTAAAATAAATACAGATCTTTATCCATCGGTTTAATTTTCAGCCCAAAAACATCTATG
CTCAGTAAAATACACCTGTAAATTTTATACCCCTGTATTAAATTACACCTATACCAAGCG
CACCCTACGTAAAATGTTCCGATGGTGCAGCTGGCTCATGATGCTAATCTCGTTGTCAAA
GTCCCTTTTGGTATGATCTGCAGATGTGTCTAGGATCTTTTTTACTGCCACATTCTCTTT
GATGCCCGGAAGTCCACTACCTTCATGGACTGCACCAAAATAAACTTTTTCCTTAGAAAA
GGAGGGTTACCTCCGGCCTCTACATCAGTATGATGCATACAGTCCTTTTATTAAAATAAA
CAAACTGATCTCGATCCAACGTAGTCTCGAACAAAGTAGTAAAGAAGCAAAAGTAGATCA
AAAAGTGCCACAACCGGCAAAACAGGCCTAGATGCCTAACCATCTATCCTATTACTCGAT
CGCCATCCAAACCGGTTGAAGATATCCCGCGCTACCATCTCCCATCGGATAGATCCAGTA
ACCAAAGGCTCTCTGGTTTCCGCAGGAGTGAGTAATGACCACATACGGATCAATGCAGCA
GCTCTGTGAAGTACCTGCAAAAAATGTATATTCATATATCTGTTAAAAACCACATCATTC
CTACAGTTTCATATAGCCCAAAGAAGTGCACAAACTCCAATTCGATGTGTCTAGCAATAA
ACATATCAACTCCATCTAGCCACGCTCCAAATAACGTGTCAATGCTATCCGGAGGTACAA
TGTTAAAGGCTATACGCACTGTGTGCCAAAGAACTCTCGCAAGCGGGCATTGGAGAAAGA
GGTGTGTAATGTTCTCTTCGTTATCACAAAA