morexGenes - Barley RNA-seq Database

Contig contig_2547592
Source Contig contig_2547592
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_2547592 (8197 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_2547592

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_36977	1	638 bp	MLOC_36977.1	Available	Available	LOC_Os01g33030.1, FRAME:+1, EVALUE:1e-16, 13101.m03334 protein Brix domain containing protein, putative, expressed
MLOC_36976	1	1638 bp	MLOC_36976.1	Available	Available	LOC_Os11g26950.1, FRAME:+1, EVALUE:0.0, 13111.m02582 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
CDS Structure of MLOC_36977

CDS Structure of MLOC_36976

Contig Sequence (8197 bp)

>contig_2547592 8197 assembly3_WGSMorex_rbca.fasta
TCCTTCTCCCACCCCTCTCCCACGTTAGCCATCGTGGGCCGAAACTCGTCGGCGACGCCG
TTCCCCTCTCCTCCTACCCCCCACCCCATCCCCGCGGTCACCTCCGCCCACGCCGACACC
AACCGCGCTCAGCCCGCTCCAACTACGGAATGGATTTGCTCCGACGGGGGTTATTAGAAA
CAAACATTGTGGAAGACTTAATTATAATTTAGGCTGAATTTGAAGGTTTGGATGACAATT
TGTGTTGTCTATTATTTAGTTCCTATAATAAATATTATTGTGAAAATAGCCATAAAAGTT
ATCATCTATTATTTAGTTTTTATGTTCATGGTCTATTATATGTAGCCAATGCACATGAAG
TTAAATTATGGTTTACAAGATTTTGATAAAGATATACATGCCTTGTTGCACAAATTTCTC
ATAACATGCATTTTGTTGCAGAATTTTCTGTAACATACATCTCGTTGTAGTTTCTTTTTG
CAACAAAAATCTTGTCGTATTTTTTTTTAAATCTATAATAACGCCTTGTTATAGATTTTA
TTTTTGCAATTGAAGACTTGTTAGATGATTATTCTAAAAACCAAAGCCGCGTCGCATCAC
GATAGTCGTTCGCCGTTAAGATTTGCAATTATACGGTTGTTGCTGAAACAGATGCTGAGA
CCTATCTTTACGACGAGGAAGCGTGGTACGCAATAGAGACGACGAATGCATCATAATTAT
CAGTCGGCTGATGGCAATCATTTTTCATATTTTAGAGGGGCTGAGAAAATTTTGTGCAAG
GTTATAACCTCTGTTGCACGTATCAAGGTAGTTGAACAATCCCCTAAAAAAAATACTACC
TCCGTCACGGTTTAGAAGGCACGGTTAAGTTTGCTTGCATTTCCACAACACATAAGGTTT
AAGGCGCATTGCATTTACTTCTAGCGGCTAATTAGTATTATGTTGTACAGTACTATTTCT
ATATGCATGCGTAGTGTGAATGTTATTTTTCAACTCATTTCACAGCCAATTAATAACCAC
ATAGGTTCTAGAGAATTTTCATGCACGTCTTCTAAACCGGAGGGAGTAGTCGGTGGTTGC
AATTACTACACGAGGCACGTGGCAGCCGCTGCAATCTTGTCAACAAAACCTCCAGCGAAA
GCTGCTCCATATTCCAGAATCACAAAGCAAACCAGATCCACACACGGCTGACTGACACCA
ACTCATCGATCCAGTGTTCGACCGAGAGGATGGCAGCCGACGGCATGCACGTCGTGATGT
TCCCCTTCCTCGCCTTCGGACACATCAGCCCGTTCGTGCAGCTGGCGCGCAAGCTCGTCG
CCGGCGGCGGGGTAAGGGTCACGCTGCTGTCGGCTGCGGCCAACGTGCCCCGCGTCGAGG
CCATGCTGGGGCCGGCGGCCGCCGCGGTGGCGGTGGCCCCGCTGCGCCTACAACGCGTGC
CGGGGCTCCCCGAGGGCGCCGAGAGCACGGCCGAGGTCTCCGCGGACGGCGCCGAGCTGC
TCAAGGTCGCCGTCGACGGGACCAGGCCGCAGGTGGCGGCCCTGCTCGCGGAGCTCCGCC
CCGACGCCCTGCTGTTCGACTTCGCCACCCCGTGGGTCACCGAGCTCGCGGCGCCGCTCG
GCATCAAGGCGCTGCACTTCTCGGTCTTCTCCGCCGTGTCAGGCGCCTACCTGATGGTCC
CCTCCCGCCGCCTCAGCGACGGTGACCATGACCTCAAGTCGGCGCCCGCAGGCTTCCCGC
CGTCTTCTTCGCTCGCGACCGTGCCGGCCTACCAGGCCGCCAACTTCAGCTACGTGTTCA
CCAGCTTCCACGGTGAGCCGTGCGTGTACGACCGCGTCCTCGCCGGCATCCAGGCCAGTG
ACGCCATCGTCATCAAGACGTGCTTCGAGATGGAAGGACCCTACATCGACTACCTTGCCG
CCCAGCACGGCAAGCCGGTGCTCGTCACGGGCCCGGTCGTGCCGGAGCCGCCGCAGGGCG
AGCTCGAGGAGCGGTGGGCCAAGTGGCTCTCCTCCTTCCCGGACAAGGCCGTCGTGTTCG
CCTCCTTCGGTAGCGAGACATTCCTCCCGGCCGACGCCGCGACGGAGCTACTCCTCGGCC
TGGAGGCCACCAACCGGCCGTTCCTCGTCGTGCTCAACTTCCCCAAGGGCACGGACACCA
CGGCGGAGCTGGCGGAGCGCACGCCGCCGGGGTTCGAGGAGAGGACCAAGGGCAGGGGCG
TGGTGCACACGGGGTGGGTGCAGCAGCAGCACATCCTGCGGCACCGCAGCGTGGGGTGCT
TCGTGAACCACGCCGGGCTGAGCTCCGTCGTCGAGGGGCTCGTGGCCGGCTGCCGGCTGG
TGCTGCTGCCGATGAAGGGCGACCAGTACCTCAACGCGGCGCTGTTCGCGCGTGACCTCC
GCGTCGGGACGGAGGTGGCGCGGCGCGACGGCGACGGGTGGTTCGGGCGCCGGGACGTGA
GCGACGCCGTGGAAACGGCAATGGCGGACGGATGGGAGGGTCAAGGGACTAATAAATGGA
GGGACTTCTTGGTGGACGACGCCGTGCAGAAGAGGTTGGCCGATGACTTCGTCACCGACT
TTAAGAAATTCGTGAGGGCTTGAAAAGATGATGTATGCTTCGTTCGTACATGAAGTCAAA
TCAAATAAATGAAATGTGTGGTTATGTCTCAGTCAACTGAGACCGTGACTTAACCAAGTC
TCAGTCAAGTACTGTAGTGTATAAAAAAATATTTTTACAAATCTTTATATAAATTCAACG
GAATACAACATCGACGGAGACATAACAAAGTCTGAAACGACTGAGACTTAGCAAAACAGA
TAAATGAAATATTCAAAATAAAATAATGATTTTGCTATTCATCGGTTTGCTGTTTCATTC
CTTAATTCTTCCAAGGTTTTTTTTATTTAAAAAAAATGAATTCTACTTTTACTCTATGTT
ATTTTATTTTCTGTTTCAAAGCTATGGCAACATACTCCTAAAGTCCATTTATCTCTGCGC
ATGAAGCACTTAGCTATTTTTGTATATTTCGCACGAGTTTTGTGTAGTATATACCACACA
AGTATCGAATATTGTTTAGAAATAATTCGATTCACAATGGAATGAGTGGTGAGACTTTTG
CTCATATTTACCAAAAACTTCATAAAGCTTTTCACGAGCCGTATTGAAGTCATCGGTATA
ATTTAAACTTAGGGATGCAGATAGTAAATTGAGTGCACTACGATATCCTTTAAGTTTAGC
TCTAGGATCCAAGATAAATGCAAGTGCATACAACAGAGCAATTTGTTTTCAATATTTTAG
ATACTTGGTTTTCATGTCAGCAACAACATTAAGTAATAATCTATCTGATTCATATGCTTT
AACATGACTAGCAATTTCTAATATAGTATGCACCATCAAAGGAGATGTAGGATAATAAAC
TCCGAACAAAGTAATTGTTGCATCATAGAGCAACTCAAGAAATGAAGTCAATATTGTAAT
AACATGCCAAGTATTAAGAGTGATCAAAGGTTCAACCCCATAATTTGCATTAATAAAAGA
TAACTGCCTTAAGCATTATATATGTAGAGTTCCATCCAACAACCATGTGTGAATTAAACT
TATGAGGAGTTGTGCCTAGAGCAATGCAATATCTCCTATAGTTTGCAAGTCGTAGATTAG
AATGCGAAAGATAAGAAATGGCAGTGCGTATGACTTCAATGTGTGGTTCACATATATCTG
GAGCACCTTTAGCAATAAGATTAATGATATGGCAAGCACAACGTTGATGCATTAAAAAGG
ATGCAACATATATGGAGAATATAGGAGCCAGGGTATTCATTACTGAAGTGCTTGCTGAAG
CATTATCCAAAGTTATCGAGGAAACATTGTTGGCAAGATTGAAACCATTCACAACTTTGA
GTATAGTTTCAACAATGTTTACAACACTATGTGATACATCAATTAATTCAAATCCCACGA
CTCTTTTTTGTAGATGCCAAAGTTACTTAACATAATGAACTACCACAATAATGTAGTCTT
GATTTGCCCTACCACTCCAGATAGCAGATGTTAATGACACTGAAAAAGTGCATGTAGAAA
ATTCTTCTTTTATTTGCACTTTAGTAGTTAGGTAGGAATTTTTAATATCCCTACTTGTAG
TTTGTCTCGAAAATGATCTATAATTAGGATTATGACAAGTTTGAATATATTGTACGAAAC
CCCCAGATTCACCATGCCTAGTGGTAGATCATTAGAAGCAATAAGATGACATAGACCTTC
TCTCTGGACATTAGCATCGTATGTGAAATTATCTACCGTACCATCAGGGTTGAACTTGAG
TTCAGTTTGCACTGCTGCTATCGAGCTTGATCTCGTCTCTACTTCCTTCCTGACGTGGGA
ATGCACGTGTCTCTTCAGGTGGACGGTTCATGCCTTGGCTTCTCCGATATATAATTTTCC
GCTGCACCTTGCCTTCACCTCCTAGACACTAGCCAACGCGGATATTTCTTCACCGAAACG
ATCCCACACCGCGGAGGTTCTACGACGAACTTTTCCTTGACCCCATGGTGGTGGAGGAAC
CGGTCACACTACTAGAATGTGTACGAGCTTCGGTTTCGGTAGTTGGATCGGTATGGGGTT
CGAGAGTGGGATGATCGATATATGCATGTTGCTCGGGTGGAGGATTGGAAGAAGAGGGTA
GAGGCTATAATCCATATCCCCACGACAGAAATTGGAGAGGGTGAATCTAAGATCATTATT
CTTATCCATCTTTGAGTGTGAGAAGTATGTGGGGTAGGCAGCCCTATTTACGACAAAAAA
TTGTCATTTTTGGAAAAATTTCTCCCTCCAGCGATAAAAAATTCAAACACAGGGATTTTT
TCAAACAAACCAAACCCTAATCCCTACCAAACCCCACCCCACCTGGTCCCAACGGATCTC
TCCCAGGCTCCTAGCTCCGCTCCCCGCTGGGGCCCACTCCCGTGCAGGGCGCAATGGTCG
ACCGCACGCGCCAGACCGCCAGACCCCCGCTCCCCCATCGATCGAGGCGAGGCGAGCCAA
CCGTGTCATGCCACGCGCCGTGTCGTGCCACCTGCGGGCACGTGAGTTGGTGTGGCGTGT
CGGGCTAGCCCGCGTGCTGAAATGGCCCAAAGCGTGTTGCGTGGCTGGCAAGACACAATT
AGCCCATGCCGGGTCTGGCCCATCGCGTGCCGTCTCGTCGTGCTCGTGTGCCGGTCCGCC
AAACATGGCCCGTTTGGCCAGTTTTGAAACCCACATCTTATATTTTATAACAATGTGACT
CTACATATATTACTCCAAAGACACGACTGTGAGTCTCTGACACGTTAGCATAAACTCCTT
CCCCTAAGAACATTTCTACAACCATCTAAATGGTACTTTCTGTGTAAACTAATTTAAGAC
CGCTTAGATCACTCATCCCATGTCAAAAAATGGTTAAGACCGGAATCGTTATCGCTTCTA
AAAGGAGAGAAGTACATAATGACAGCTCATGTCAATAAGCTACTAGTAAATATACTTCCT
TCGTTCCTAAATATAAAACCTTTTAGAGATTGCACTATAAANNNNNNNNNNNNNTATATA
GATATATTTTAGAGTATACATTCACTCATTTTGCTNNGTATGTAGTCTCCTAGTGAAATA
TTTAAAATGTCTTATATTTTGGAACGGAGGGAGTAGCTTTCAACATCCCATAATTAATGG
CTCAAGTGCATCATGTTTTTAGATCATGGCAAGTGCAACTTTGTGTAGAAGTATGGTGAC
AAAAAAAATACAAAAGAAAAGATATGTGAAGTGACTAAACATATACGGAGTAAACGGCAA
ACTTGTATCAATCTTCGCATAATGAAAAAAAAAACATTTTTATGGCTTTTAAGGAAACAT
TTTTAGGTGCAACAATGGAAACACCCCCACTCAGGCCTAGTTTGGCAGGCCGGGCCGGGC
CAGGACAGAAATTTCAGATATCATCCTTTCCGGGTACACCGGGACCGGGTTGCCCCGGGC
CAGCCCGCCCCGATCCGACATTACGTCCCGATTGAGCCCTCGAGGGACGCGCGGCTTATT
TTCCTGCGACCGACGCGCCGCAGCCGCCTCCAGGACGCCGGCGTGCCCTTCTTCCCCCGT
GCCTTCTCCCCGGAGGTATTTTCTCCCCTCCCCTCCCCTCCCTTCCCCCAGCCGTTTCTC
GCCACCGTCCCGCCATGGATGCCACCACAGATCCAGGCGCCGGCGCGTTGGTCGGCTTCG
ACGCCGCCCTGGCGTACGCACCGCAACCGCCGAGCTCCGCCACGCCTTTTCTTTTGCGCG
GCCGTGTGTTGCGGCGGCGCCCTGGCGTACGCACTGGAATCCTTTCACGACGACTGTTTC
CTCAGCTGCGCTTGGTTCCCAAATTTCATTTTTTTACTAGGGATCGGCAACCATGAGAAC
TTACTGACTGTTCCTAATAGTTTCACCCTTCTTTTCTGCCAAGCCCTCTCCCATCCTACA
GTCCAATTCCATCAGCAGTGGTACTGCATTACAAAGAGCAGATACCAACACTGAAAATTA
CCGAACATCAGTTGAAAGGAATTCCTTGTTTGGCTGTTCGATAGCTGCTACGCTTGCATC
ATCAGTTACCTTTCCAGTATCTCATACACTCTGAACTAGTGAAGACTATGCCCCCTGTGA
AGACCATGTTCAGCACACTGTTTTACCATCCTCCTGCAAGAACAAGTGCTACTGCCGTAA
ATAGGAACAGCGCAGCTGCACCTGGAGACTTAATGTAGAGACGACACCATGTTTGCACTG
TTTTACTCTGTATTTTCGTGTGAAATAAGATATGTATTCAGAATTCTGTTTCTCTTATAC
CATGGTCCATGGATGCTGGAGCTTGCCATGGAAGCACTCATAGCATAATTTTTTACAGGC
TAATATTCATCTTGAGCCCCTCAAACACTAACTTCTGAATTCTTGGGTGTATGGTTTTGA
CCTGAAAATTACTTTGCCGCTCTTATAGTTGACTGTGGATTGAAAAAAGAACTTTAACAT
CTGATCACAATACTTCAGTTAATTTACCTAGTGCTACACTGCTACTTTATCAAACAAAAT
TAGCTAAGTTTAGGTGATTTGGCCCCCTCTATCATTATATGACATGTTTTGGCCCCCTCT
ATATTCAGTTTCTGGCTCCGCCACTGCTACTTGCTATTATTTTTTATCCATATATCTAAT
CCAGGGCCGGCTTTAATTTTTCTTATATGTCTGGTAAGATAACCCAGTGAAGTCTAAATC
CATAATTAATGCTAGAGAAAAACCATTATAAGTATATACAAATGCATATCTGTTTGGCTA
TAAAGTAGTTGCATGCTTTTACCATCCCGACCCAGCTTATAAATGGTTAATCCTTGGATT
TTTTACATTGTCCAGCTAAAAGTCTACAGAAAGAAGCTAGCTATGAGGACTCCTGGTCAT
GCTAAGAAGGTAATTACAATGGAACAACTGCCTTTTGTTCATCAGATATTCTTATCCTGA
TGGTTAAGTTGCAGACTGGTGTCATTGGCCGTAAACAACTATAGGTCCTGCTCTAATTTT
GTGACTGAGAACTTGTATGTCAGTATATGTTCTGAACTACATTAACATTTTTGCAGGTGA
AAAATGTGACGAATGATGTAATTGATGGCAAGCGGGGCATGATCTACATTCCAGACCAGA
AGGTTTGTGTCTATTTTTTTTTGTAAATACCTGTGAATTTTAAATTTAACCTATTGGTAT
ACTAATCCGCTTCATACTTTTTTTACTGAAAGATTTCAAAATTGACCTTAACAAAAGACA
TAAAGGGTCTGAAGCGAGAGCGCCATGAAGCCAAGAAGAAAAAGGGGCATCAGAAGAAGC
AAAAGGTCAATGCTGAGTGAATAACACAGTCATCATATAGTCTCGTGCATATTTTGTTTT
CCAGCATCAACATCATTAATGCTTGTTCCAGAGTTATTGTAAGTCTGCATTGTGGTATTG
AGTTAGCTGGTAGTTTTGTATCAATTTTAGATATACTAGACGATGCCCCGCGTGTTGCAG
CGGGAACCTTGTTAAAAATGTATGGGTAAGTGGTAGAAGACCAAAATTAAAACAAAAACA
AATATAAAACTTTCTTACATGATTTAATTCCCTGGAAAAATAATAATGCATGAGGTGGTA
TGTTTTGCATTAAGAGATTAATGGAAAAAATAACTTA