Map Locations of contig_2547568 (4277 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2547568

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36964 4 3433 bp AK359427 Available Available None
MLOC_36965 2 2659 bp AK250247.1 Available Available None





CDS Structure of MLOC_36964






CDS Structure of MLOC_36965






Contig Sequence (4277 bp)

>contig_2547568 4277 assembly3_WGSMorex_rbca.fasta
CCCCCTCCCCTCCCCCTCCCTTCACCGCCGGCGAACTGACTGACGCCATTCTCTTTCTCA
ACTCCGCGCAGGATCTCTCCAACAAAATCCTGCTCAATGCCATCAGAGGTAGGCCACCAT
CCATCCCACACCACTAGAGGTTTCTTGGCCGCCATGCGCGGCCGCGGCTTACTGATCGAC
CCTTGCCGACGCGCCGGAATTCCCGTTTTTGCTTGCAGCCTTCTCGCCGCTGGTGCTCCG
GCTGGGCGGCTCGCTGCAGGACAAGGTGGTGTACGGCACGGCGGACCATGGGGGGCCGTG
CGCGCCCTTCGCCAAGAGCGAGTCGGAGATGTTCGGCTTCACGCAGGGCTGCCTGCCCAT
GCGCCGCTGGGACGACCTCAACGCCTTCTTCCAGAAGTCCGGGTAATTTTCATTTCACCC
TCCAACCACTCCATGATTTCAGTTCTCAAGATCAGAAGGATCATCACATCACCCTCGAAC
CTTTCCACTGTGAACCCGCAGGGCCAAGATCGTGTTCGGGCTCAACGCCCTCAACGGCCG
GGTGCCGCTGCAGGGCGGCGCCATGGGAGGGGCCTGGAACATCAGCAACGCGGCGTCGCT
CATCCGCTACACCGCCGGCAAGGGCTACAAGATCCATGGCTGGGAGCTCGGTAGGTGCAC
TCCTCCATTATCCTCTGTTAACTCAAGCGAGAAACCCCACATGGAGCCTCAGTCGTCAGA
TGATGGTGTTCTCTTCTCCTTGCAGGGAACGAGCTCAGCGGCTCCGGCGTCGGGACCAAG
GTGGGCGTGGCGCAGTACGTCAAGGACGCGATCGCCCTCAAGACGACGGTGGACAGCGTG
TACCGGGGCAGCCCGGAGAAGCCGCTGGTGCTCGCGCCCGGCGGCTTCTTCGACGCGGCC
TGGTACAGCGAGCTCATCGCCAAGACCAAGCCGAGCACGCTCAACGTGGTGACCCACCAC
ATCTACAACCTGGGGGCAGGTATGCAATGCAACTAAGCAAGATCACCGCGACATCGCAGG
CGCCACAATTCGATCGACACAAGAACCGGTTGATCTGAACTGGTTTGCCAAACATTGGAC
GTTTACAGGGGTGGACACGCATCTCGTCGAGAGGATCCTCGACCCGGCGGCGCTCGACGG
GATGGCGAGCCCGTTCAGGGATCTCCAGGGGCTGCTGAGAGCCGCAGGGACGTCGGCCGT
CGCCTGGGTTGGGGAGTCCGGAGGTGCTTACAACAGTGGGCATCACCTTGTCACCGATGC
ATTTGTCTTCAGCTTCTGGTAAGATGGGAGATTCTGATGACGGAAATTCAGTAGTAGGTG
CTTCTGATGCGGCTGTTCTGATAGGGGTTGTTGATGTGGTTTTAAGGTTCCTGGATCAGC
TGGGCATGTCAGCGAAATTCGACACCAAGAGCTACTGTAGGCAGAGCTTCATCGGTGGCA
ACTATGGCCTGCTGAACACAACCACATTCCAGCCAAATCCTGACTACTACAGGTAGGATC
AGTATGCTACATAACCTTCTACTATACTACAGGTAGGATCAGTATGCTACATAACCTTCT
ACTATGTACTCAACGAAATGTCCACTGCAGACAATGGCTAATGACATGGTAGGAACTTGC
CTGAAAGTGTGTGATGTTTAACCTCCATGACATATCTTCCTGCCAACATCTCTCTGCAGT
GCTCTGCTGTGGCATCGCCTGATGGGAACCAAGGTCCTGGAAGCGAGGTTCACCGGCACC
AACATGGTCCGCGCCTACGCGCACTGCGCAAAACATGCCGTAAGCATTCAAGATCATCCT
ACACCTTTTACATCACCATAACAAGCATCAACAATCTCATCATCACCATCAACCATGCCC
CTTTCAGCCGGGGATAACCCTGCTGCTCATCAACCTGCACCGCAACGCGACCAACCACGT
CACGGTGGCGAGCTCAGGTGGCGCGCACGCCGGAGCCGCGAGGAGGCACGGCCCACGGTT
CGGGCAGGCGGCGGGGGCGGCGAGGGAGGAGTACCACCTCACGCCGGAGGGCGGCGACAT
CCAGAGCCAGGTGATGATGCTGAACGGCAGGGCGCTGGTGACCGGCGCGGACGGGAGCAT
CCCGAGGATGGAGCCCGTCAAGGTGGACGCGGCGCGGCACGTCGCCGTGGCGCCGAGGTC
CATCGTGTTCGTCCACATGCCGCACTTCCATGCCCCCGCGTGTGGTTAGTTAGGGCTTTT
GATGTTCTTGTGTTGGTATAGGTGGTGATAAGGATGGGCTTGCCAAGCATGTGTCCATCA
TAAGATGATTAAGAATTCAAGTCGGTGAGAAGTGTGTGGTGTTGTGTGATTAGATTGTAA
GAGGATGGAGGGGGGATTTGAGATAGTGAAAACAAGAGGCAGTGGGAATAACTCTTTCCT
GGTTTCTTTTGAGTGATTCTGTTCCCTTGTTCGGAGAAGAACAAAAGAGAGGAGTAGTGT
GACTTTCAGGATACTCATTGTTTTGGATGCGAAAACATGGTCAGAAGACAATCGAAGATG
TTGGATCAAATGCTTCATGGGAGCCCCTGGTGATCTATAAAACACCTTCAACGCAGGAAT
TTCACAGTATTTACTTGGTTTGGTGCCGAAGGAAGCAGAGCAGCTCTAATGCTTGCATTG
CACTACATGGTGCACAGAGACTAGATGAACAAGCAAGAAACAAGATAAGAATTTAGCACA
GGTGAGTGATACAGCAATCATCATGATATCATTGTTCAAGGGTGGGTTCAAACATTATCG
TCGTCATCATGGGACGAGGAAAATTTGCCAGACACATACCAACGAGGGAGGACATCTGGT
CTCTCTCTTCTACTACATGGAGCTACAAGCCGGTAATGTAATGGTGAGACTAACATAACG
CCTTCAAGAGGCCAGGGGAAAGGGGGGTAGGTAACTGCGGCAATCCTGGGATGACATTGA
CAACCAAAAATAACAGCAGCGCACAACGTACGAACGGCGGGCGGGCGGGCAGGCAGGCGG
GGGAGTTATTCGTGACAGTGTCTGTAGATCATCGCTCGACTCATCACGAGTCCTCTAGAT
GTACTTGAACAGCAGACCTCCGTACGTGGCGAAGAAGGGCGCGAACACGAGGGACTCAAC
GGCCATGAGCTTGATGAGGATGTTGAGCGACGGGCCTGAGGTGTCCTTGAGGGGGTCTCC
GATGGTGTCACCGATCACGGCGGCCTTGTGGCAGTCTGAACCCTTGGGACCAAGGGACCT
CGCATGCTCGCTGTTGCCGGCCTGAAACAAGCAGCAAAGAATTCAATGACAAAGTTAAGA
GATATGATCAATAATAAATAAACAAACAGTCATAAAAACACAATCCAGACTTCTGAGCGC
ATTTACCTCGATGTACTTCTTTGCGTTGTCCCATGCACCACCGGTGTTGGAAGCAGAGAT
GGCGATCTGTAAGAAAGGAATTTGGTAAATTCCTGGAATTAACAGATTCAGAGCAACTCA
AAGGAAGAAAGAAGTACGATACCTGCACTCCAGAAACGAGGGCACCAGCCAGAACACCAG
ACAGGGTTTCCACGCCAAAGAGGGTTCCAACAATGAGGGGGGTGAGCATGACCAAAGCAC
CCGGAGGGATCATCTCCTTGATGGAAGCATCAGTGGAGATCTTGACACAGGTGGCATAGT
CAGGCTTGGCAGTTCCCTCCATCAGTCCAGGAATGGTGTTGAACTGCCTGCGGACCTCCT
CAACCATCTTGAGGGCAGCACTTCCAACACTCTTCATGGTCATGGCAGAGAACCAGTACG
GAAGCATGGCTCCGACAATCAGACCAATGAACACCTTGGGAGATAGGACATCAACGACCT
TCACACCAGCTCTGCTGACAAAGGCACCGAAAAGTGCCAGGGACACGAGAGCAGCTGATC
CAATGGCGAAACCCTACAACATTATATGCAAGGAGGGAGTTACATAACCAATAAAGTGGC
TTTCACTACAAACCCATCACCCACTGCCTAATTCCCTACTAACCAAATAGCTCACGTACT
TATCAAATATTTTTAACTTCTGGATGTGGCAAAAATCAACAGTGGTCAAGTAAAGGAGTT
GCCCAACAAATGTACAGCAGGAAAATTTACCTTCCCAATAGCAGCGGTTGTGTTGCCAGC
AGCATCAAGAGCATCAGTCCTCTCACGGATTCTGTGGCTCATGCCAGCCATCTCAGCAAT
TCCACCAGCATTGTCACTAATGGGACCATAAGCATCGATGGCAAGACCAGTTGCCATTGT
GCTTAGCATGCCAAGAG