Contig Data
morexGenes
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Map Locations of contig_2547477 (3853 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2547477

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36904 2 1519 bp None Available Available LOC_Os01g15260.1, FRAME:-1, EVALUE:2e-11, 13101.m01685 protein dynein light chain type 1 domain containing protein, expressed
MLOC_36903 1 915 bp MLOC_36903.1 Available Available None





CDS Structure of MLOC_36904






CDS Structure of MLOC_36903






Contig Sequence (3853 bp)

>contig_2547477 3853 assembly3_WGSMorex_rbca.fasta
CGCCGGCGGTCTCGCTCGCGCCCCGGCGGCCTCGCCCTCTCCATCCCCGCTGGGACTCCT
CTCCCCGTGCCCGGCTGGCCCTCCTCTTCCTCCCTCGCAGTGCACCTCTTCCTCCTCCCT
CTTCCTATCAAACAAAGTCTCACCTCAACATGTGTCAACACATACATTACTACCAAACAA
CAACAAATGCATCTAGTCAGCATGTTTACACTAACCATGTCTTAGGTGGGAACAACCATG
CTAGGTAGGGAATGCAACCAAACACGCCCTATAGCGCTGGTGGCTAGGGATCGAGGTATC
TCTAATCCTCCCGACCAAATCCAAGCGCCACCACCACACACACCAACACACCACATCGCA
ACTGCTCACGGGGTGCCCGCTGGTGTGCCTCCTTCTTCCTCGGACGAGGAAATGTAGACG
ACGCCAGCAGGGACGCCATTCGACGGATCGGAGGCGAGGCCGGAGCGGCACCTTGGACGA
TGGTCGATGGCGGCGATAGCATGGTTGAAGAGGCGGCGGCGACCCTCCATGCTCACAGAG
TCCGGGAGGCGTGGTTGGGCGTCCGCCTACTCCATGATGGCCATGGACTGCAAAACGACG
ACGGCAGCCGTCCTCGTGGATGAAGTGGAGGAAAAAAGAGCCGAGGATATGCATCTCACC
GTCGGCAAGGCTCTCGACAAAGCGTGCTGATAATGTGTTTGAGTGGAAAAATGATTTAAG
TGTATTGATTGATAGAAACAGTACAACTTATATATATTAGGCTCATCTCAAAAAATTTAA
CGTGATGTTCGGAAGAGACACATCACGCGTTGTGATGTTCGGAAGAGACACATCACGCGT
TGGTTGGAACCGATGCAACGCGATGGTTGGAAAGAACCGATGCAACGGTTAGAACAGAAG
GAAAAGAGAGATGTGTCGGTTGCTACTCCCTCCTTTTCGGTGGTTTATAGGGCTCATCTC
AAAAAATTCAGATTTCTATTATATTAGGCTCGTTTTGAGTCTAATTGAGTTAAAGTGTTT
TCTACATCCATCATGCAATTCCAATGAAAAAAATGATACTACATTTATTGCTTTGAAAAT
TAAATATGTGAGAAATATTTAACTGTTAGTTAAAACTAGTGTCATCCACTCACAATTTAA
TTGATGAGATTTTACATCTGAGCCCTATAAACCGAAAAAGAAGGAGTAGAAGCAATTGCA
CGCCTGAGAGGAGATTTTCCCTTTAATTAACATAAGCTAATTAATTACAACAGCATCGAC
ACGTTGGGTCACTTTTTTGTCCGTAACAATTTAAATGAAGTAACAATTTAAATGAACAAT
TTAAATGAAGTAACAATTTAAATGAACATGCGCGGACGAAATGAATCATGGAGTTGCTCT
TAGGTACGACTATACGAGCAAAATGCAAATTCTGATTTTGATCATCCCATGAGACCAGTT
TAAATGGACATGCTGAAATGGATTGTATGGTTGGAGTTGCTCTTAGGTACGACTATACGA
GCAAAATGCAAATTCTGATTTTGATCATCCCATGAGTCCAAGACACTTTAGCAACTAGTC
AGTAGATCAGACAGTTTTCGGTGCATCGTTGATGATGACTTCTAGTCCAAATCATGGCAA
TATTACAATCAGACAACGTCAACAAGACCTAGCTGCATCAAAGCAAAAGAGAGACACGAT
CTAAAATCTCACACCAACATGGAGGCTCTTTCCAAATTTCTGATTTCCAGTTTCGTGGCC
GACACAGATGAAAGAGGGGCACACAGGAGACTGACGCCAGGGGAGAGAGGGATCAGACGC
ACCCATCACCCAGACTTGAATAGTAAGACAGCTTTAGAATCAATGTAGAAATACACAAAG
TAGTTCGTCTCGTGCGTCACGTAGGAACCTGCAAAAGCGATGAAAAATAATTAGCAACAT
TGCTTGCACTCATATGTATCTCGTGTCTATAGCAATGCACATCTTCCAGCATTTGAAGTT
CTCAAATGGATCACTTAGGCAAACCAGCAACCAGGTATAAGGGCAGTAGTTTATCACCCA
CGATCAACAAAAAACCCCTGGATGGTTTAACAAACCAAAACCAAATTATAACAGGAAAAG
TCCAGTAGGACTGAGGAAGTCTTGAGGATCCTCTGACTGGTTTGAGAAGATGACACCCCT
CTAAGTAGGTCAACAAAGCGAAGTAAGACAAAAACATACTCCCTCTGTTCCAAAATAACT
GCTTCAACTTTGTACTAGCTCTAGTACAAAATTGTACTAAGCTTAAGACATTTATTTGGG
ACGGAGGGAGTACATGCTAAACCTTAGGGGAATTAAACAAATAAACACAAAAAATGGGCC
AAAGAGAATATACATGAGCAATTCACCCAGTCATGTTTATTAGATTGACTCGCAAAATTT
GCCAATCAAAAAAATCTTTCTACACTTTCTACAAGACTTTGAGAAACAAAGGTAAGCTTT
CTCTAGCATCTGCAGTCAACCAGAGAGCCCTAATATTAACTAAGTTTGTTCTTTCACTTT
AGAATTTAGTTTTGGGGACAGAATGATCTATACAACATGGAACCACAAAATCATCTAAAG
GTCACGAGATGTGTGATTTAACAGCTTGTATTGTGTCAAATGGAACACAATAACTGATTC
AAAGGATTGTTAGATATTCACGACACTGTAAGTTCTCAAAGCCATTGCCAGACTGAAACT
GCAAGTTTTTACAACTACACTTTATGATGTATTTCTTGCCCAACTAATGCAAAGTTAGTC
CAAGAAAATTGACGCCAATGACACATTTCATCATGCCTGAGGCAACCCTGCAACACTTCT
TTTTTTACTCGGTGACGTATGGAGAGTTGGAGACAACTATCAGAAAACGAATCTTGCCTA
AGGTGCGGTCACAAACCAAACACCCGTCTCCTTGATCAAACCAGCCTTATCTGAATGCTG
GCGAACTGAGGCAACCATAGTGGCCAATAAAATAGGCCTAGGCACTTTCAGGGTGAGAAG
CTAGCAAGTAATAACAGTCAATATAACAAAGGTTGAGCCATATGGTTCCCTTGGTCCCCC
ACTCCCCCCCTCTCTGTTTATTGGATAAGGAAATTTGACATGTTGCTAAAGTTTAGATTA
ACAATTATGAAGAAAATGATGGTATAAAGCGAATAAAAATGAGAGGACTCTTATGTCATG
GGCCTAATTAATGGCCATCATTGTTGTTTGGTTAGTGCCAACTAAAGGAATAAAATCCAA
TGCATATCGACCATACATGGGTTATTGATTATCTGCATTCCTGATGCGACTTTCTACTGT
CAAATGGTCTGGCTTGCAAACAAATACTGTCGAGAAACTCTAAGAAATCTGGTGAAATGA
AATGGTTACCTCAAGTACAAAACAAAACAAAAATCGTAGAGGGCGGAGTTGAAAATGTAT
AATTAACATGCAACTATCTATACATATCAAAGATATTTGATTAATCTGTCGTCCTTCTAG
AACCACTTCACATTCAGATGAGCTAATTACATTTGAGGTTCCCATACTCTCTTTCAGCCT
GTTAACTGTCAAGGTTATAATAATGCAAAGTTGGAAACAGATGATATGGTACATCATGTA
AACCTCTAAGATGACATGGCATGCCATGTGGCATGACACAGAAAATCTTGTGGCATGGCA
TTACCAAGTCAGTCGAGAAATCTGTACATAACATGTCAGTCAGTTTTCCATGCATCTCAC
TATCAGATAAACTAGCATGGCAATGACACTGCATATAAGGATCCAAGCGCAATTTATTCC
AAATTAGTTTTAGACAAGAAAGACTGAAACATAGACTCCAGATTGTTAGGTTGATCTCTT
CCGTGTGGGCCCA