Map Locations of contig_2547465 (5912 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547465

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36893 1 1253 bp AK362989 Available Available None





CDS Structure of MLOC_36893






Contig Sequence (5912 bp)

>contig_2547465 5912 assembly3_WGSMorex_rbca.fasta
ATGCAACAAAAAATTCAAAAGGGGAAAACTCATGTTGGTAAAACTGGGTAGAATGTATGT
TATACAAGGTTATTAGGGAGGGGGGGGGGAGGGGGGCGGCACGGGGAGGGTGGTCGGGCG
ACGCGATGGTGGTGGTGGCACGGGGAGGGGAGAGAGAGGTGGGGAGGTGGGGGAGAGAGA
GAGGTGGGGAGATGGGGTGCGACGGGGGCGCCGACCGTTATGCGGCCATCCCCTTTGTCG
TGTGCTAGCAGAAGTCAAAGAGGGGGAGGCAGACGACGAAGAGGGGGGGCGCATGGGCTC
TTTGACGCCTGCCTGCCCAATCTTTGTCGTGTGCGAGCAGACGACAAAGAAGGGGGCGCC
TGGGCTCTTTTCCGTCTGCATGCGACATCTTGCACACGACAAAGAAAGCACTGATGGCAA
GCAGCTTCTTTGCCATCAACTAGTTCTTTGCCATTCGTTTGTTGGTAGTTGATGACAAAG
AGTCTGTTTGCCATCAGCCAGCAGACGGCAAAGAGCAGGCTGATGGAAAATCCCCTGATT
CGAGTAGTGTGGGGTGATGGGGGCGATGAAGAGGATGACGGGGCCGACGGTGGCGACGAA
GATGACGGTGGGACAGACAAAGCCGGCGAAGAGGACAACAAGGCTGAGGCGACGGTGATG
GAGATAGCGAGATCCATCGGGGAGAGTTAGGGTGAGAGTGAGTGCATGAAGTGCGGGGTC
GAGGACGAGGGTGCACGTGGGTTGATAAAGTGTGCGCGTGGTGCGACGGGCGGTTACTAT
CACCCGCCACAGCTATGTTATGTAAAAACTGGACATCTGGCTAGGAATACTAGTGGCGGT
TGCTAGCCCATGCCCGTCACTGCTTGGTCACCTACCTATGGCGGGCGCTAGGTACTACCC
GTCATTGTTGAGTTAGGCAACCATGTCTCCTCCGGGAGATTATACTTGTGGCTAGCAATC
GGCTTTGCCCGTCACAATCATGCTACTAGCTATGGTGGGCGGTTGTTGTCACCTGCCACT
ACTTGTTTTCAAAAATAGTTGTGGTGGGTAGCACACCGTGCCCACCACTAGTTGGGTTCC
ACCTATAAGCCCTTTCCCAGTAATCCATGGCATTGATAAATGCCGAGAAATTAAAGGAGC
TCCTCGGATGTTCGACGTGTGAATTCTTCAGATACACCTCAGTCATCCTCGAGATCAGAT
ATGAGAATATTTGTTGAACCGACCTTCAAGACCGACAACCAAAGACAAAGAACAGTTGGG
AAGAACCGAGGAGTGTCCCCAATTTGAAGATCGGTGCAAGGGGTTACATGGAGTCATGTA
TTAGGGGATACTCACCACGCCGTCCCCCGACCAGGAGGGCCGGGCCGAGGACCTCTATGG
CGGTTCACTAATGGGCCTCGTCGGGCAACCCATGACGTATATATGGAAGATTACACAAGA
CTTGCCGCCCAAGACGAGGACTTTTCTAAACCCTAGACATGTCGTGCATTATATAAATCA
AGGCAAGGCTAGATAATGAGGGACATCTCATATTCATTACAACAATATCGTGATAGATAC
ATGTACTCTATACTATCCCTCACATCATTACAATGAAAAGCATGATGTAGGGGATTATCT
CTTCGAGAGAGCCCGAACCCGGGTAAAATCTCGTGTCCATGTTACCATCGCTCCAAGACG
CCTAACTTAGGATCCCTACCTCGACATATGACGAATTTAACACTGACACCGTGATCAAGG
TGTTTGGACCTAAGTACTTGAGAGAACCTATTATCTCAAACACTGAGAGGCTCTTGGCAA
TATCCGAAGCAAGAGGGTGACCAAGTTTGCTCGAATCTCTTGATTGCATGCACTGGAGAT
GGAAGACTTGTGTAAAAGCTCTACAAAGGCAATATCAGGGTCATGTTAATAAGCCCACCA
TCATTCTTGAAGCAATTACATCACATGACCTCTGGATTTGGCATGCTTGGGTCTCATAAT
GACATCAATGTGTTGCCATGGTCTCCATTGCTTGCTAGGCTGACTGGAGGGCAAGCTTCT
CCTTGCAACTATGGGCATCAATGCAGCATGGGCTACTATCTAGTTGACGATATCTGTCCT
CTGTGGGCTACCTTTGTCAAGACCATGTTTGTGCAATTGGTTAGAAAAGTTATCACTTTG
CCCAAAGACAAGAAGGAGCTAGAAAGGATGTAGAGATGGCATTTGGAGTGCTCCAGGCCC
GTTTTGCAGTTGTTTGTGGATCTTGTGGGAGGTGATGATATGTTGTGTGATCATGCACAA
TATGATTGTGGATGATGAGGATGAATATGTTGTCGTAACTCTTGAATTCTAAAACATGGG
TGACCTATCCAACTTTTCATATCATAATTTGTTCATATTTGAAGAGTTTGTTCAAATGCA
TCAACAAATTCGACATGGAGCAACTCATGAGCGAGTCAAGGAAGATTTTATTGAGAATTT
GGGTGGTTAAAGGGGACAACTATAACATATATGCTAGTTGAATTCAAATTTGAACTACTC
TAATTTGAAAACTTTGTTAGATTATACTCCTTGTGTCCTAAAATTCTTGACTTAGATTTT
ATAAGTACAGATGTATCTAGTTACGTTTTAGTGTTAGATACAATTATATCTAGACAAATT
TAAGACAAGAATTTTAAGACAAAGGTAATAATATTTAAATTAAAACTACTGTCGTATTTG
AACATTTTCAACCATCTACGTTTTGATATGTTGTTATTTTAAGCTTGCGGACTTAAGAGA
GCGGTAGAAGTTTTAGGGGATAGGGTTGGATGGTCGGCTCATGGATCACTTTCCGCAAAC
TTCTCCTCACTAGTATGTTAACGGATACAATGCGTGATTTGGGGTCAATGTTGGAGGTTC
CCGTAAGACGCATAACAGTCCAGTCAGACGTATAAATAGGCAAAACTAACCTACATGGCC
CCCAAATGAGCCCACAGGACAACTTTCACGGTCATTCAAGAAGCATTTGCAATCTATATG
GTATCTCGCGTAGGTGACAGTGACCCCACCCAATGATTTACTCGCATAGGAGGAAACTAG
ATGGGGATATTCGACATGGACCTAGTTAATGTATAAAGTAATTAATTCTTAAGAGGTTAT
AAGTATTGCTTCGTGTCGCATGCTCCTAGTTGGAATAGCATTATGATGACCAAGATCGTT
ACCTCCTTCCTTCAAATTGCACAATATAAGATCACAAATGGGGCATTACAATAATTTTGT
ATAAAGAAGGGTGAGACCCCCAAGCATCTTCTCGAGCGCCTAATGGCTCTTGACGACTAT
ATTGAGTCATATAATTGTGACAGGAGCCAAGATTGTTTCAACATGACCAAGCGATTCCTT
GTGCACAAATTGCTAAATGTACATGGTCCTTATCATCAACAAAATGGCATGGGGCATAAG
AAGAGAGTACGGTTTTAAGGACATGTCTACCGATGATGTCGTTGCCACATTCCAATTGTT
TGAGGAATCCAAGACCAATGCAACAAGACGTCTTGCCATGCATGGTATCTCATCACCACT
AGCGTATGGAGCAGGGGCACGCTGCAACTGTCGATCGTATAGACTCAACGCCAATCGGGT
CCTGATGGAGTAGGTCAAAACCCTAATCGTCTAGGGCACTCACAGCTTTTCTTGTGTGCC
ACTCACACTCTTTTTTTTTTTGTTGAAGATCCCTTGGGAATGACATTGTTTCTGAGACAT
CCATGGCATGACATAAACAACCTTCGACAGTCCGCCAGCGCAAGAATCAGCCCGGCCCAC
ATGAACTGTCTTAAAGGCACGCAGCCCAGTCGACAAACCCACAAAGGCTCCCGAGATTTC
CAATCCTCTTCTTCCTCCTCCTCCTCCAGCCTACCCCTCTCTTCTTCCCCGATCCACCCC
CCAAACTCGTCGCCTCCCAGTTCCCGGTCTTTTGTTCCTCACAAGTTCGTCGCGCCAACG
ACTCTACAAGCCAGCCCCGCTGGTACTGCACTGCCGTGGATCGGTCCTTCTGCTGCTGCC
GCCGGTAAGGAACCCTAGCTTCTCTCGTCGACGCGGCAGCGGGACGTTCTCTCTCTCTGT
TGCCTGGTTTTTCTTGGATGCCCCTGTGCCCCTGGTAATCTAACACATCCATCCATCCAC
CCGTTCATGGTTTCTCCGACTAGGTCCTCCCAATTCAGTCCGTCGCGAGATCGATCCCCT
CAGGGCGCGGCGCGCAGGTGACGGAGCGGCCTATTTCCAAGTATTTCATCTCTGGGTGCT
AGCAAGAGACGGATAAGATGAAGCGCAAGCGCAGCCGCACGCCGGGCAAGAAGAGTTCTT
CGAATTCCACCGGGGCAGACTCTTCGTCGGCATCTCCGTCCAGCCCAAGCACCGAAGAGA
ACATCGCAGCGGAGAATGCGCCTGTCTCGGGCTCCACCCCGGCAGTGCCCGATCCATCTC
TTCCTCCTGTACCGGAGAAGCCGAGCGTCCTTGCCCCAGGTGCGGCTCATCCTGCCGCTG
ATATACCGTACGCCAGGCTCAAGGTGGGGGCAGTGTACGGTCGTGTGAAGCTGAAGTTCA
AAACCTCCAAGGCGTCAGAGCTCAGCAATAGTTCGTCGGTAGCACAGGCACCCGCCACTG
CTGGTAAATCTCAGACTGCCGCCCCTGAAGTGAGCAACCAAGTTACCGCCGAAAAAGGCA
TCGCTGCATCCTCAGATGGCCAGACAACTGATGGGCAAGAGTCGGAGTTGAGTGGTTCTG
ATAAGGACAAGGTGGCAAAGAAAGTAGGAAGCATAAAGATCGTGTCCGCGGGATTATCTT
CTTCAGCACAAGATAAAACCCAACACATGGAGGTTGATGAAGTAGATGAATCTCTTCCAA
GTAAACAGGAACCTGTTTTAGTCACCGAGGAAAGCGAGAGTGCATCGGAGCCAAAGAACT
CGCAAGGGTCGGAGATAAAGCAGTCTGCCCTTGAATCTCAGCGCGATGAGAAAGAGTTGG
CTGCTGCACTTGAAGTGAGTACAAGCTGGCTCAACTTTACATGGCGTCTTTTGATTCTCC
AAATATCACATGGTAAAGACCGGAAATACATGAAACCTTTACTGAAATTCTCTTTTGCTC
TCAGGCTATCAAGAAGGTTATGAAGGTCGACGCAGCTGAGCCATTTAACACCCCAGTTGA
TCCTATTGCTTTGGGAATACCTGTGAGTATTTTGTGGTGTCGCTTCTTTCTTTCCAAATC
ACCTGGAAGTTTGGTAGGCTTCACACATAAATATATTCCTTCTAAAAGATCTTAAACACT
TAGTTGACTCAGCCCCTCATAAGTCTCGGTGTCATATAGTCACTTCCACAAAATGTCTTC
AGTGGTGTGGTATCGATCACTTCCACTGAATTGGTTCAGACATCTACTTGTTATGAGTAT
GCAGGTTTCCATTTCCCACGCCCTCTATTTTTCCTTTCACATTTTTTTCTGGGGTAACTC
TATTTTAAAATGGGTTGCTGCCCCATCTTTAATTCTATGGTCGAGCAAATGCCCCATCTT
TAATTCTATGATCGAGCAAATAAAACTGATGGTTATGATAGGGGTATTAATCTATGGCAT
ACGTGAAAGCTCTGCCTAATTATATGATTATTGGACTAAAACCTAGTCAAAGCTTTCCTT
ACTCACAAGATCAAGTTCTGAACCCCAGTGTATTTGTTTTTCTTGAACATACTGAGAGTA
AGAAACAGTTATTACAAATGCAGACCACTTTCTCAGCAGTGTCTCAGACAGACTTCTGTA
GCTGCATGTCTTGTGACCATCGTTCTAACTACCTAAGAAACTAATATAAGAGCATTTAGA
ACACTACTTTAGGAATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTAATTATATACT
CCCTCAGTCCCAAAATAAGTGACTCAACTTTG