Contig Data
morexGenes
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Map Locations of contig_2547431 (4161 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_2547431

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36871 4 3191 bp MLOC_36871.1 Available Available LOC_Os03g11720.1, FRAME:+1, EVALUE:0.0, 13103.m01325 protein glycosyl hydrolase, family 31, putative, expressed





CDS Structure of MLOC_36871






Contig Sequence (4161 bp)

>contig_2547431 4161 assembly3_WGSMorex_rbca.fasta
CCGCCCCCGCCCGCTCCTCCTCCGCCTCTCCGCGCTGCCCCCGCACGCCCTCCGCCTCCA
GATCGACGAGGACTACTCGGCCAACACCCCGCCCAGCCGCCGCTTCCACGTCCCCGACGT
CCTCCTCCCCGATGTCGACTCCCGCGCGCTCCACCTCTCCAAACCCAAGACCGTCGGCAG
CGTCTCCACCGTCGCGCTCTCCTCCGACCTCGACGTCGTCGTCAAGCACGATCCCTTCGA
GCTGACCGTCCGCCGAGCTGGCTCGGGCGACCCCGTGCTCTCCTTCAACTCCCACGGCCT
CTTCGACTTCGAGCCGCTGCAGGAGTCCAAGCCCGAGGGCGAGACCTGGGAGGAGCAGTT
CAGGAGCCACACGGACACGCGCCCCCGCGGCCCGCAGTCCATTACCTTTGACGTCTCCTT
CTATGGCGCCGACTTCGTGTATGGCCTCCCCGAGCACGGCTCCACAGAGCTCGCCCTCCG
CCCCACACGCGGCCCGGGGGTTGAGGAGTCCGAACCTTACCGCCTCTTCAACCTCGATGT
GTTCGAGTACCTCCACGACTCGCCCTTTGGGCTGTATGGGTCGATCCCCTTCATGATTGC
ACATGGTGCAAGTGCATCTTCAGGATTCTTCTGGCTTAATGCCGCGGAGATGCAGATTGA
TGTGCTTGCACCAGGGTGGGATGGCGCAGCATCGTCGGAGAACGGGAGAATTGACACGCT
GTGGATGGCTGAGGCTGGTGTCGTTGATGCGTTCTTCTTTGTCGGTTCCAAGCCCAAGGA
TGTGATCAAGCAGTACATTAGTGTTACAGGTACGCCTTCCATGCCGCAGCAGTTTGCAGT
GGCATATCATCAGTGCCGGTGGAACTATCGGGATGAGGAGGATGTTGGTGGAGTGGATGC
TGGGTTTGATGAGCATGATATTCCATATGACGTGCTCTGGCTTGACATTGAGCACACTGA
TGGCAAGCGATATTTCACATGGGATCGTTCCACATTCCCGAACCCAGAGGAGATGCAGCG
GAAAATAGCAGATAAGGGGAGGAAGATGGTAACGATTGTAGACCCACATATGAAGAGGGA
CAGTGGATACTACCTCCACGAGGAAGCTACCGCCAAAGGTTACTATGTGAAAGATGCAAG
CGGGAAGGACTACGATGGATGGTGCTGGCCTGGGTCATCATCATATCCCGACATGTTGAA
CCCTGAGATACGGGACTGGTGGGCTGACAAGTTCTCCTATCAAAACTACAAGGGATCAAC
TCCAACACTGTACATTTGGAATGACATGAATGAACCATCAGTCTTCAACGGCCCTGAGGT
ATGTCGCTGAATTGCAATTTGTCTATGCATTATCTTGTGAAGACGAGTTTTGCAGCAAAA
CTGAAACATTTTATGCATGAATCAATCTTGTTGAATAGGTCACCATGCCTAGGGATGCTA
TACACAACGGTGATGTTGAACACCGAGAACTGCACAATGCATATGGGTACTATTTCCATA
TGGCTACTTCAGATGGGCTTCTCAAGCGAGGTGAGGGTAAAGACAGGCCCTTTGTTTTGT
CAAGGGCTTTTTTTGCTGGAAGTCAACGGTATGGGGCAGTTTGGACTGGTGACAACACTG
CAGATTGGGATCACCTTAAATCTTCTATCCCGATGGTTTTAACTCTTGGTCTTACTGGCA
TGACCTTCTCTGGTAGGTAGACCTACATTACAACTTCACCTTATAATCCTGATGTTTATA
AGCCTTACTAACATGGGAAGCTTTGACAGGTGCGGATATTGGTGGATTCTTTGGTAACCC
TGAACCTGACCTATTGGTGCGTTGGTACCAAGTAGGAGCTTTTTATCCTTTCTTTAGAGG
TCATGCTCACCATGACACCAAGAGGCGGGAGCCATGGTTATTTGGGTAATGCCACAAATA
ATTAATTTCGTAGGTTTTTGTTTATCTTGGAAATTTCTCAACATGGCTTGTAAAAAAAAG
AATTAAAGAACTGGCTGATAATCGTGGAAAATCTGTCACCATGATGTGACTTCACACTGG
CATCTAGAAATTTTAAGTTGACAACTTAGTTTGGGAAACGTAGATTATAAATGATATCCG
TTTCAAGGCTAACATACTCGTTGTACTTACTACAGAGAGCGAAGAACTGCCCTCATGAGG
GAGGCAATACATATGCGGTATTCATTGTTGCCCTATTATTACACTCTGTTCCAAGAGGCT
AGTGTAACTGGTGTTCCTGTTATGCGTCCTCTGTGGTTGGAATTTCCTGACGACAAGGAA
ACATACAATAATGGTGAGGCTTTTATGGTTGGGGCAAGCATTTTGGCCCAAGGAATTTAT
GAAGAGGTAAGTAGTGATACTGCTTACTGCTTACTGCATACATGTTTTTTTGATAAATCA
CTCATATTTTGCTGGAAAATACAACATACTCCTAGATGTTTAATATTATAACTTCATGCA
GGGCCAGAAATCAGTGTCCGTTTACCTTCCTGGAACAGAGTTATGGTATGACTTGAGAAA
TGGATCCCCATACAAGGGCAGTGTGTCACACAAGCTGCAAGTTTCAGAAGATAGCATACC
AAGCTTCCAAAGGTCAGGTACAATTGTGCCAAGAAAGGATAGATTCAGGCGCAGTTCTAC
TCAGATGGTGAACGATCCATACACCCTGGTATGTCAAACATGTTTGCCTACGTAAACATC
TTGCTCTTTGGTAATTCATAATCCCATTTACTAATCATCTCCTTGATGTGCAAATAGTCA
TTAATAGTGTTAACATCTACCATAATATTTTTTTACCGGTGAAAAGTTGCATGTAAACCT
TTTTCTTTACTGAAGACATGTTGCACGTGAACGTTACTTAGCTAGCACCTTCCAGATTAG
TCGATGTAGTTCTGATGATCAACCATACATCATATTGCAATGCTTGTTAAATTATTAGGC
CCATTGGTCTGTTGGATTGGGGTTGCTGTGATTTCATTGCTTGAATTGGGCATTGGGCAC
ATGCGTCACTTCTGCGAATGCAAAAGTAGCTAAATATATATGACTATGCAAATCTGTTTG
GTTGATGTAGCTGCTAGCTACATACTAGTGCGGTTTATTCTCTGAAGTAGACTATTTAAC
TCTGTATTTTTGCGATGATCAGGTGATAGCCCTCAATAGCTCGGGTTATGCAGAAGGTGA
ACTTTATGTGGATGATGGGAAAAGTTATGATTACCAGCAAGGGGCATTCATCCATCGGCG
TTTTGTATTTGCAGACAATAAGCTAACTTCGATCAATATTGCGCCTGATAGTCTGACCAA
GAAGGTTTATTCAACTGAGTGTGTGATTGAAAGAATTATAGTGCTTGGGTTACCATCGGG
AGCAAAGAAGGCCATCATTGAACCTGGGAACCAAGAAGTGGAAATTGATCTAGGACCGAT
TAGTTTAAGGAGTGGTTCAAAGTCTGTTGCACCAACAGTCAGGAGGCCCAATGTTCGAGT
CGTAGATGATTGGACGATAAGGATCGCATGATATGCAGCCCATTCACACCTGGAGCCTGA
TGTCTCTATTGTTCGCGTCAGGCCATAAACTTGGGTAATGCTAGAAGTGTAGTTTCAGCC
TCGTAAATGTTCTCTGTGGGCACCCAAATTTCGTTGTTTCGGTGGCCTCAAAATTTCTGC
ATGTATCTGGTACGCATGCTGCTTGTACTTCCAATTTTGACATAAGTGAGAGACATTAAT
TGCTGATGTATACCTGTAGCTTTTATACTGAAATTTGTGTGCCAGGTATGATGTATGTGA
TATGAAGTTCTTGTGACACTGCAATTTAGAATATTTTTTTTGTAATCTTGGATAGTTCTT
TGCTTAAGATTGTGAGATGTAATCTCACCAGTTGCAATCTAGTAGTTTTTTTTCACCTTG
GATAGTTCTTTGCCTAAGATTGTAATCCCACCACCTTTTTTGTCCATGAAAATCTGTTGT
AACCCATATAGCCCACACACTTCCTCTAATAAACATTGGGGGAAGTTGAAAAATATTGCC
TTCTCAGACAGAATGGCAAACTGAAGAGCTTGAGCCTGCCTGGTCGTTTGCGGGGAACGA
GATCGTCTGACTTAGATGAATGTACTGCAGAGGGAAGTAGTACGCCGTGCGCCGTCCGTT
GACGATCTAACGACATTCTCT