Contig Data
morexGenes
Links



Map Locations of contig_2547354 (4884 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_2547354

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36801 1 2086 bp MLOC_36801.1 Available Available None





CDS Structure of MLOC_36801






Contig Sequence (4884 bp)

>contig_2547354 4884 assembly3_WGSMorex_rbca.fasta
ATATGGAAGCAATTGCATCCATATTACAATAGAGAAGTATAATATTGTTGACATATTTTT
CCATTCAACATTTCAACTTGACAAGCAATTAACATGAATATTTACACGAAAATCCACTGA
ACAAAAGATAATAATAAAGCAGAATTAGAAGAAGAAAACAAAAATACAAGACCTTGCTAA
GTAATACAACCCGTATCTGATTGCAACAACCTGAGTTTCTTACATTAGCCATTTTAAGGA
ACTTTTTGACAGTGAATGCAAATAAAAATTTAGTATGCAGATAATTCTTCAGCGGTCTAT
TAAAAATCACACTGAACAGCTCATGGCTAAACACCTGACCTTCATAAAATAAGTTAAATT
ATCTACACTGGAATAAACTTCTCACTCTGGATTTACAAGGCCAAGAAGCTGGAGTATAAA
TTGGAGAAAAGAGGCTCTAAAGCAAAACTACCATCAATTGGGAACAAGAAAGCTAATAGG
TAATAGTGTGAAAACACAAACCACCACCAGACAAAATAATGAAGACAAACAAAAACTAGA
TTTCCAGGAATATTTAATGAAGCATAATCATGTCATGAAATCCAAAATATTCACAATCCA
TATGTGATGTACCACATGCAAATCACAGATCAAAATGAATTAGTACTGTAGATGAACGTG
AATACATCCATATTAAATTAAAGAAGTACAGTATTGTCGACAATTTTTTTCACTGGCCGT
TTCAAGTTTCAACTAGGCACGCACATGAAATAATATTTAAGACTTGACAACCAATCAACA
TAAATATTTAAACAAAGACCCAATGAACAAAAGAGAGGTATGTCAAGTCCTGAGTATAGG
CGCTGATAAAGCATAACTAGCAGAAGAAATAACAAAAATACAGGACATTGCAAAGTTCAT
CCTATCTGTTGGCGACAACCTCAATTTATTACATTAGTGAATTTAAAGCAGTTCTTAATG
TTGAATGCAAATAAAAATTTAGCTCACATGTAATTTCTTCAGTACTGTATTATAAATCAC
ACTGAGCTGTCATTTCTCAACAACTGACCTTCAGAAAATCAGTTAATATATAGGTATAGA
CTTCTCACTCTGGATTTATATGGCCAAGAAGCTGAAGTATAAATTGGAGAATAAAGCCTC
TAACACAAAAGTTACCCACATCTAGGAACACGAAAGCTAATAGCGCAAGAACCTGAGCCA
CAACTGGACCAAATAATGAAGACAAACAAAATCTAGATTCCAGGACGATTCAATGAAGTA
ATCATGTCATGAAAGTAAAACATTACACAATCCATATGTGACACCACATGTGAGCTGCAG
ATCAAGTGTTTGTCACATCGTCATATCCCAATAAGCTAGAGATACACAAAACTGCACTAT
ACTAGAAATCAGGATAAGCTGACTCAACGTACATCTGATAAATGGGCTTAGAAAGCTACA
TGGTCCAGATCATTCTCAGGACTACTGCAGAAATGCATATTCTGGTACCTTGTTAATGCA
AAAGGAAATAGATAGGAGTAACTAGAGCGCTTGCACAGGAGAGGTATTTGCTTCTTCAAT
CAATAGAGAAGGGTGCAGCAAATAGCATAAAATTTACAGACAACTGACGGCAAGACCGTC
AAAACAAAATCAGGATTTAAGGTGAACAATTTGTTGTACAACTAAACCAAGGAACATTTC
AGACCATAACTACTGCTGCCCACGCCAAAGATAGACCGCAAAGACCATCAAGGTGTTAAA
TGTTAGTACTAGTGACGCCAGCCCCCCTGCTATGCCAATTCCACCATTTTTCAAACTAAA
CTCAAATCACAGCGGATTTTGTTGGTATGCACGCGATTTGAATTAAGCACAAAAGCAATA
CGGATCACTACTCTTAACAGTCCACTTCAAATTTCATATATGCGTCAGACAAGGGTCTAT
AATCCAGAAGAACACATCGTAAGATGGACGTGCTCTCTAGCAGATCTGTTGATACAGCAA
AATCGAACGGAACAGAGACGGACTTGTCGACAATCGAATCTAGTGTACAGAATGTTAAAT
TACCCCATGTTGGACCGGCGAGGGAGGCCGCGAAGCTCGAGTCGGGAGCTTGGCTGCGGC
CGACGGCGAGGGCGCTAGAGCTAGCGGCGGCGGCGGCGGAAAGGTCTCGTGGTTTGAGTT
AGAGGTGGGACTGGGGAGTGGGCGAAGGGTTTACGGAGGTAATTCATTGGCATGGGCCTC
TTTAGTTGGCGTCAAAACGAGCAGGTTTCGCTAAGGGTGGCGCGCAAATGGGCCAGCCCA
GTTCGCAGGCGCCGAGCGAATGGCAAAAAGAAAAGCGCACCAGGACCTGGCAAATCCTAT
TTGGCACTGCAGACGCCCGTTAATGTGTATTTTTGCTAACGGGCGCCTGCAGCATCGCGC
ACTGGGCCGGCCCATATAGTTGTTTTAGTGGTTTTTCTTTTGTATTTTTAATATGCAAAA
AATTTCGTGAGCCCGTTGGGTTTCGAACCAAAGACATCCTTCTTTTTTACAGACTTGTGG
AAGCACCACGCCAAGCAACAAGTTGGCGTTCATTTGAACCCTTCTTTTCCTTTATTCTTT
CCCTCCCGTTTTCTCTTTCTTTCATTTTTTTCGTTTGGCTTTTTCCTTTTTCTTTTCTAT
TTTTTCTTTTTTCTTCTTACTGGGTCAATAAATTATCTTTCAAATATGTGAACTTTTTCT
TCAAATCATTGAAAATTTTCAAACTCAATGAAGTTTTCAATTTGAAGAACTTTATAAAAA
ACTGTTTAAGTTTTTCAAATCCGTTATATATTTTTCATTTTTTATGAACTATTTTCAAAT
CGGAAACTATTTTCCAAATCTGCTGATTTTTTTCCAAAATGGATGAACCTTTTTCGGATC
CGATGAACCTATTTTCCAAATCCGCTGAACGTTTTTCAAAATTGATGAACTTTTTTTCGG
ATCCGTTGACCTTTTTTCAAAATCGATGAATATGTTTTGGATCTGATGAATTAGTTCTAG
TTATGATGAAAAAAATTCAAATTCAGCGAACTTTTTTTCAAAATCTATGAAGCTTTTTCA
AATTGAATGAACTGTTTTAAAAAAACTGATGAACTTTTTACATTTTTGTGAACTTTTTTT
AAAATTGGTGAACTATTTTCAAAATATATGAACCTTTTTCGAATTGAATGAACTATTTTA
AAAAATGGATGAACTTTTTTCAGTCTTGTGAACTTTTTTGTCAAATTTTTATGAACACTT
TTCTATTTTTGTGAACTACTTTTTAAAATTGATGAACTTTTAGAAAAATCACTGGACTTT
TCATGAATAGGCTGATGTATTAAATAAGCTTGTTTTTGAATTATGCATCATTCTGTTGTT
TTGGCGCAGTGGTTGTTGGCTAAGACTACCATGGTTAGTGTGTGAGTTCGAATCCCGGCT
CTCGCGTATATTGGCCGACCATACTTTTTCTTTTGCCGTCGAAGTAGCTGCTGAGCCGGC
CCGCTAGACGGCGTGCGCGAGCGCCAGGAGAGCTAAGCGGCGCTGAATTCGCCGAGTAGG
AGCTCCCCCAGGACCTCCTATTTGCCGCATTTTGTGGCGAAAAACTAGTGCGACGCACAG
AAGGCGTGCGGCTGGGCCGGCCCACTGAGAGGGAGCTCGAGGTGCGTCTACATCGATAAA
AATCGTAAAAACAAAAGTGAAGCAGCAAGGAATCAAACCTGACGTCACTTTCCACCACAA
GTGTTGCTAGCCACTAGAGCAAGTCGCTACATGTGAAAAATAACGCATCGTTAAAGTATT
TAAGAAATTACAATTGCGGGATATCCCCCTTGAATGTTATTTTCTGTACCTATAGTGCAA
CATATGGATTTTTGAAAATTGAACACATTTAGGTAAACACGAAAGGTACTTTTGAGGAAA
TGTGAACAAAATTTGAAACTTCAAAGGGATTTTCAATTTTTTCTGAACATTTCAGAAAAA
AAAGAACAAAATTTATGAAGGTGATTTGAAAAAGCTATACTTTTTTAAAGTGTTCATTTT
GAAAATGTGCAAGCATTTACTGAATTTCTGAATATATATTCAACAATAGGAATATTTTTT
GAATACATGAACAAATCTTGGAACCGTAAACATTTTTAGGATTTTGGAACAAATATTTGA
AAGAATGGAAACTTTCGTGAAATTTCCAAAAAAAAATTATAACTATGTTTTTTTATAATT
TATAAATAAAAAATGAAAAATGGAACTTTTCTTTAAATTCCGAAGAAAAAAAAAATGGAC
ACACATATACAAGATCGAGGGGTAACAAGAGAACGGATCAAGGTGTGGGATTGTGGAGAA
CACGAGATCCCTATTCTGTTAGGAGTAGAACAACTGTTGATCCTCGCTTTCACGCCAAGG
AGCAACATGATTTCTATGAGACAGTACTATTGAACAAGAGTCATACAGTAAGTGACATGG
GATATGTAGACTAGGACTACATCAAGGAACATGAGGACTTCATCCCTCACGTGAGAGAAA
AATTTAGGGCAATTGACATTGAAGATTTTGTTGGTAAAGAGATGACTGTCTGGAATGATG
AAATGATCATGCAATTTCACTCCACCACACACTTTTATCCATATGGTAGGATTGTATGGA
TGGCTGAAAGTCACAGGTATGAGTCAACTATGGAGGATTGGGCTACAATCATAGCTGACC
CAATGGTCCAAAAGGGTGACTTGGATGTGTACTCTGAGGCAAAAATGAATCAGAGCAATA
TGGCTAATATGTACAATTCAATGCCCCACTGGTACTTGAAGACACACAAGCTGTTGGAAA
TATGCCCTAGNNNNNNNNNNNNNNNNNNNNNNNNNATATTTCTTTGTTCATGATAATTAT
CTATTGTTCATGCTATAAGTGTAT