Contig Data
morexGenes
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Map Locations of contig_2547340 (6436 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2547340

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36790 3 2171 bp MLOC_36790.3 Available Available LOC_Os01g61860.1, FRAME:-2, EVALUE:0.0, 13101.m06607 protein TBC domain containing protein, expressed





CDS Structure of MLOC_36790






Contig Sequence (6436 bp)

>contig_2547340 6436 assembly3_WGSMorex_rbca.fasta
GGGGGCGGTGGGGTGTGGGGGGGGGGGGGAGCTAGTCATTTGCAGGGATGGAACGTTCGG
GTTTTAACATTTGTATAAATCATCGTAATGAGAGATATTGAAGTAAATAGACTAAGAGAT
CGGACAGAAGCTACTCTTTGGTGAATATGTAAATTACTGGACCAGATGATTTCAGAGATT
CAGAGATCTACTCCAGAAAATAATTTGCTTTAACAAGAGGTTGAAGATACATAGGAATAA
CATTCCATGATTTATGTGGCTGATCATTCACTCCTTCAAATTATGTTTGCACAAAAATAG
ATAGCTGCTTTAATACAGTAAAGAAGATGATGCGAACACCTTCCTGAAACAGAACTCCTT
AAGAATGACGGTGTAGTCATTTTGTGAGTTTGTGTAAATTGACTGGAAAACATGCTAACT
AAGATATTTGTACATGATTAATTCCTATTTATGATCAATAGTTCAATAGTTTTTCAATTG
GGTAGTTTTGCAATTTGGAGACAAAGGAAAAAGTTGATGAGTATATCGAGAATGATACCT
GATCTTTGGGATCAGGCATGGAATCAATCTCAGTGTTGACAGTCAAGCCATGATACATAT
CATCAATATCTCCAGAACTGGTTTCTTGGTTAGCATCCCCATCTGTTGAGTCATTTAACT
GTTCTGCTGATATTGACACCAATGGTTCAGTGTCACGCTTGAAATTGTATAGCTTTGATG
CAAGACCATTGCTGCTCCTCCATGCAAGAAGACCTTTTGCTCTATTTTCCATTGAAGACA
AAACAGATGGCCGGTGTTTATTTCTCAGATCTTGTAGCCTTGCTTCATCTACAGCTTGAT
ATCCCATGCAAGCAGTTAAAACAAGCTGGCTGCTGTCAAAAGTGGAACCAGCTAAAGACT
GTAAGAGAGTTACGGCATCCCCAGCATCTTTCGTTGTCACAAGTGCAGGACCTGCAACCA
GCAGTAGTGTTAAGTCACCCGAGATGAACTATAATGTATTCAGACTTCATATAAAGTTAT
ATGGCTTTGTTGTTTCTGGATGAAAATAAGGTGGAATGACCCCAGTACCATACAACTCCA
TAAGTGCAAGGGCTGTCCGGAAGAGCATCACACGATTTCCATCAAACAGAAGCACATCCC
ACACACGAAGAACTGAAATGTTCAAATAGCACTAAAATGGTAAGTATATTATGGCATAAA
CTAATAAGAGATTAGAAGTGTTAGTCTCTTACATCAAGTCCTTGTCAAACCAGTTTAGAA
AGAAAAAGACAAGAGATATTTTGCTGTACATTTGATTCTACAACCAACATTTGACGCAAA
ATCCAAAAAGGGCACAAATATGTTTTTCCCATTATTGGTATGCCGTGCTTGTAGCTTTGA
TAACAAAAGCTTATCTAGTCTAACATATTTAATATTATGACAACTGAAAATGATGCTTGT
TTTTGCCACTCACTTCACTTGCACTTGCTTTAGCATCACCTCCCATCATATTGCTAATCA
TCCCCTTTATTGTCAAAAGGTAATAACATATAGTTTCCCATAGAAAGATAATATAAAATT
TAAATTACAAGCCACCCTAAATTATGTGATTAAGGGAAAAACACTGTCTGATGTATGGTA
AGTGAACCATGGGGCAGCGTTTGAATGAGACATTACGTGGTATTTTAGTGAACTAACAAC
TTAATGTATTTAAAGCCCATGGAGGTCACTTTGCAGATCTAACAATATCAACGGCAACTT
GATGCTAAAGATAGCTTTGGTCCCATCATCAAGGAAACACATTAAATTAGCTAAGGCAGA
AGTTAATACAATGTATTTCACAAACGATAATACTATTTTATTTTGAATATTTAACAGTAG
ACTAACCAGTTTCCCAGGGAAGCATGTTCATGTATATAGATAGGAACCATGGTCCAGCAA
CCCATGCAACTTGTACACCAAGGTAATCCAAGTGATTTACTGCACACAAGAAAATTGCAA
CTCCTCAATTGTCAAACTTGGGAAGTTAACATGCCTGACGAAGTCATGTGATTTTATATA
TAAAGGGAAATATATAACAAACCTAACTTGGGGAATTTCTCTCTGACCAACTCCTCTAAA
ACAAGCTGATCCACCTAGAACCAAGATGCAGATCTTTTAATAACAAAGAGAACAGCTTGG
AGTTCTAAGTATCCAACAATCAGTATGCATAAAAGACATTAAAATGAAGGGAAAAAAAAG
TAATACCTGAGACTCGATCATTTCTTCAGAGAAGTAACCCTCAAAATAGTCATCCATGAT
GCCTGCCAATGCCCTGTGGACCATAACACATTTATCACATTATTCAGTTCAACTGTTCCA
CTATGTAATCAACTGAAGTAAGTTGAACGAATACAGGTACTTGATGTTGTGCCGCAAAAC
CTACCAGAATGCGTTCTCCTCAGACATCAATAGAAGTAATAGACCAGCAAAGAAGTTCAT
TGCCTGCATTACTCATACGATTAATCTTAGCTAAGAGAGTCCTGGAACATGCAAGTGTGA
ATGTTCGAAAACAATATTACTGTGCACAATAGAATCATAATCATGAAATACCAAGGTTTT
TTTCTGTGTCCAGATTTGGTTTTACAGTTACTATAACCTTGAGATAATGTTTGGGACATG
GATTTATTGCACCGAAGCTTATGTGCTCCATTTACAACCAATTTACAACAAATGTCGTTG
TAATTCGACAATTCGTTATACACCAGTGTCACGGTGGCATTTAGTTGATCATCCAAGTGT
TGGCAGTGGTATTTTTCGTAAATTCTTATTTCTCTGCAGTGGCTTTTTTTAATAAGGAAG
TTAGCAATCACATATATCTAATTGACCCTATCATCTACCTCCTTAGGCTGGGCCAGCTGT
TACGGAATAGTACTAGGGTTAATTTCACTTACAGGAAGCTTCAAGGGGAATATTTGAGTA
CTGGGCCTTTGTGTTTTCAAAACTGAAATACATTTTAAAGATGCAACAGAGTGGTCTATG
TGCAAGACCTTCCAAGAAAGTAATGAGATGCAGTGCCAGGAAAAATCAATATGAATCATA
AGAGAAAGATGTACCTGGCAGTAACCAACTGATGGATTATGTCTAGCATAAGCTGTGAGC
AAGCGCCTTAAAGCATTTCTGCCATCCTCGTCTAGAGCCGGATGGCCTGGAAATGTTCTA
GGCAAATCCTAAAAGGGGCAATGTAAAAGAAGACGTCTTAGCACCACACTCTTAGAAACA
CAAAATTTTATGAACAGAAGAGGATATTGAAACCCAGCAATGAAAGTTTGTATCGCCTAT
CTACCTTCTCTATTTGCCCTTTCCACTTATCTGAAGAAAGATCTTGAGATGCTTTTGGTT
TTCCATCACCACATTCCTTAATTGGAGAATCGGAATCTTTGCTGTTTCCGCCTCCATCAT
CTATCCCAAGGAGACTCTCGTAGTACCCTTTCACTCGGCGAGCTCCAATACCAACAAAAG
CTTGCCATAGCTGTCCTCGCAAAGCAAATGGACCATTAGCTTCATTGAACCAAAATTATC
ATTTTAACAGAAATGTAAATCTTACCTCTCCTCTCAGAGCCATTGGCAACCCACCACGAA
CTAAGCACTCCAATTCTTCTTTCCAAGGAAAATACCCTTCTTGACTTGCAACTCTATTCG
TTCCTGAATCCGCATTGGTGCTGTCAGCAACAGGCCCTTCGGTGGGATCAACCTTCTCTA
CATCATAGAACTCATCATCAGAGTCCTCTGAGGGCTTGATATCTTCAGTCTTCTCCTCGT
CAGTGGAAGATTGCTTCTTCTTCTTCTTGACACGTAAGCTCATCATCTCCCCAATGTGGC
CCAACGAAGGCCTGATTTCAGACCATATTTGGATCTTATGTGGTCTCTGCTGTTTGGCTG
TCTTCTCATCGGGAATGCCGGGCCTGCCAGCATCGCCCGCTCCTTCATCCTCGATGGACG
GCGCAATCTTAGCATCTTCTTCAGATGATTCATCGTCCTCTGCCTGCCTATCCAGAAAGT
TCTTCCATCTATCAGACCTCTCCTCTTCCTCCTCCTGCAAATGGAGTACCACCACACATG
CAACTCAGTAAGATCAAAGAAACACGGTGTAAAAATGGAGGCATCACTAGGGTGGCGTCT
CTACCTGGTAGATGTTGGCATACTCTCTGTACCGTTGCAAGTGTTGTGGCCGCACAGCGA
AACCATAGGCGTCCCTGTTCCAAACCCCTAGGCATCAGAAACAGAAAGGGGGGGAATGCC
ACTAAAAGCGCACCATCAGGTGCTTCAGCAATACTACGTCAAATCACTTCTATCAAAAAG
CCTGGGTGCAATGCAATCCACGTTCATGCGATCATATCAGCGACCTGGTTTTGCTAAAAC
TTGTGATGCCCGCTGCAATTTGGTCTAACAAATCATACCCAGCAAGCAACAGTCGGACAT
TTTCGCACCAAGTAGACTTACACCAAATGCAGAAAAAGTGGAGGCGTAGCTCCGACTGCG
GTGGTGCGGCGCACTGTGTCCATACAGAACCCAGATCCTTCGACAGGCAAAGCATAAAAA
GAAGACAATTCAAACATTATATCTAGAGGGATTATCCCATCGCGTCGGCAACGCGGAGAT
CTAGGGGCAGCATTGCCCAAATTTCGGGCCCAATGTCGCGCAACGGATCGAGATCCCCGG
GCGTGAAAATAGACAAATAACTGCCCCGAAAAAGAACAGAAAAAAGGCCGAGTAAACAGC
ACGCGTGCGGAAGCCGGGCGCGGCGGCCGGAGCACCCAAAACTCCGGGAGAAGCATCCCA
AGTACTTAGAACCCAGCACGAAGCCGAGATGCGCGCGTGGCGGGCTCGCGGCAGCAGGAG
CAGCAGAAGTGACGAACCGCTTGTGCTCGAAGGCGATGAAGGGGAGGCTCTTGGCCTTCA
TCTCGCGCCGCGGCGTCGGGCCGCCGCCGCCGCCAACCCCCCGCCCCTCCCGCTGTCCTA
GCTGGCCGGCGGCGAGGCGGGGCGGGGCGGAGCGTGCGGGGAGCGAGCGGGCGCTGGGGA
GTGAAGTGCAGCGCAGCGCGATTCAGGGTAGGGGTGGTTGGGGGCAGCAGCGGTGATCCG
ATCCGATTATACTGCTGGAGTGCTATGCTAGCTACTCCTGTGCTGGCTGTGAGATTTGAT
CTGCGTGGGAGTGCGAACTAAGCTGCGGAGTAACTTATTGGGGGGGTTGGGAATTCGGAG
GAGAGCGGCACCCGATTTTCCATTTGTTTCGTGGGTTTTTCTTCCTTTCTTTGTTTCTGG
GGGGGTATACGCGCGGCATGGAGATTGGGGAGACGAGACCCCCGCCCGCGCGCTCGTGTC
GTGCGTTCTTCGTGACGTGGGGGAGTTGGGCGGGCTCGGCGGCACCCAGATCCCGATTCT
CCGTGTCCACGGCTCGGGGGCTGTACGCGTCGCTGTGTGCTCTCTAATAAGTCTGAACCC
TGTCACAGCATATCTAACAAAACCCCATATATCATCGATCCACCAAAATCCTTTATAATT
CGTGGAAAAGTATTTTTACGCATCGGCGTGGGCGATGTTCGAACAGACCCCGTAAAACGA
ATTCGTATGAAAGGATATCCTTTTAAAAGGGTTTGTTTTACGGGGTTTGCTTGGCCGTCA
TCCACGCCGGCTCGCAAATCAGTTATTTGTCTTTCAATTTCGAGCATGAAAACATATTTA
TTGTTTCTTTTTTTTAAAGGTATTGGATACATAATAATTAATCAAATCTTTGCTAAAATA
GTAAGACCAAAGAAAAAAGAATCACAATTATGTATTTTATATAAGATATCTAACTTTCAT
AACTGCTTCCACTAGTTGGAACAACATCTTCTTCATGTATTAGTTGTTGATCTGCGGATT
CTTGATCTTACATTTTTTATTCTTCAACTTTGATTCTAAAGAATTAGATGTCGTTCCCCT
CTAATTTCTTTTCTAATTGCACATGCAGCCGCATCATTAGGCTCAATTATATTCAGGAGC
GCATGAACATCTATTAAGTTTCTTTCTATCAATAAATCGATGTATTCTTCTTCCCAATAA
CAAAATTAGCATCCACCTTCTTACACACATGAACACCTCAATAAGCCACCGAAATTTAAC
CAAATAAGTTGACAAAGCCGAACAGAAAGAACATGCCCTGTCGTTATTGCATTTAAAGGA
TACCCATCCGAGATGTTGCCGCGTGTTAGATGGGAGCTGCAACACTGTCTCTGTGCAGTC
GTCGCACTCTATAAGCTGCATCGACAAGCCGGCGAGCCGCTGCGCGAGCACCAAGCCCAG
GCGACGGCGGGAAGAGTCCTTGCCCGCAAACCGACGACGACGACTAGAGGCCGAACCAGT
AACTGCATGCGGCGTTCGCGTTTTTGTCACGGCTGTGATAGATGCTCCTCAATCAATCCA
TGGCTTGGCGCAGCCG