| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_2547291
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_36758 |
2 |
2337 bp |
None |
Available |
Available |
LOC_Os01g12160.1, FRAME:+2, EVALUE:5e-83, 13101.m01310 protein OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed |
CDS Structure of MLOC_36758
Contig Sequence (3631 bp)
>contig_2547291 3631 assembly3_WGSMorex_rbca.fasta
GTTCATGTTTTCACATTAGCCCCCCTCCCATCTTTGTCTAGCTCCGCCACTGCCAGGGAA
TGGCAAGTTGATAATCAAATCGTCGAGAAGAAGAAGGCAAAGGGGGTGGCAAGACAGAAT
CGAGGAGGGCTTATCTCACTAGGTTTTCCGAGGAAGCTGAATTTTTCATGTTGCGTCGAA
AGGAGAAGAAGGTAAAGACAAAACCATGACCCATCGACGTCCTCTCCGGCAAACAAGTCA
TCCAAGATCTAGTCCTAACTAAGCTTGATGCACCATCTCTCCATGTGCATCGGTAAAACC
GGGGTTTCCCCCACCTTCACCAATGCGGGAAAGCATCCGGAGGCGACGGGTACCAGCGAT
GACGGTGGCACTTACGTGAAAACCTTAAGGCCTCCTTTTGTTTGGAGGAATTTCACAGAA
TTTTATAGGATAGGATTTTTGTAGGAACTTTTTTAGAGTCCTTTGATTCAAATGAATGCA
TTCCTATTCCTATATAGAATTGGTTCCTATCCTCCACATTTCAAAGAAAAAAAAAAGAGC
ATGAAAAAATTCCTATGATATGAACCAAATAACATCTCTTTTTCCTAATCCTGCCTATAG
GATTTGAAATGCATGTCATCTCATTACCTACAACTTTCCTATTCCTTTGATAATCCTATG
AACCAAAGGAGGCCTAACCACCGTTTCTTCTTCTTCTAGAGATGAGTTGTAGCAGGCGAC
ATTTTTTACCCCTTTGGCTAGCAGCTACTCCATCCATGGAGTAGCTTATTTCCGGAGCAG
GTTAACAAGAGTTTAACTTTGACCAGGCCGGCAGGTGGCAGGTCGTGTACACGCATTCAT
GTGAATGCAACGGCTGCTACTGTCAAACAAAACCTAATTAAGTTCAAAGACCGAGCCAGC
CACAACAAAAACTCTTCCGTCATCTGAAGCCACGTACACTCCCAACCCCCCCTATCGATC
TACTCCCCGGAAATTTTATCCTATTGCTGTGTTAGTTTCCAGTACGTCACGTCAGTTAAC
AGTAGGATTTGTCGTCGCCTCACCTGCATCTGCATGGCTCCACGGATGAGGTTGAGCATG
GGCGCCACATCAAGGCCGGGCGGGCCTACAGGAGATGATGTGTCCTGACCGATAATTGGA
TAAGAACCGGTGCAACACACAGCAACAAGTGGGCACGCACAGGTTGCCGGTACATGTCCA
ATCTGTGACCACAGCCATAGGGTCCGGGCCAGTAGTCCCGGTACTACAAATAGGAGAAAT
TTGTTTGCATCATTGCTTGTTTGTCTTATGTTGGCCCATGCCGTAGTTGGCCCTTTATTT
TTTTAGCATGACTTTAAGCTTCGACGGATACAACGTTTCCTCTCTCGGGAAATCTCAGAA
AACTTCAACAAACAATTTAGTGATGGAATTGTGGTGATTCTGACGCGAGAAATACGTCTT
TTGGCAGGGCTGTACCGGTACAGGCTGGGCGACGTGGTGCAGGTGGCCGGGTTCCACAAC
GCGACGCCCAAGCTCAAGTTCGTGTGCCGGCGGAACCTGGTGCTGTCCATCAACATCGAC
AAGAACAGCGAGCAGGACCTGCAGCTGGCCGTGGACGCCGCCGCCACCAAGTTCCTCGCC
GCCGAGAAGCTGGAGGTGGTGGACTACACCAGCCACGCGGACATGTCGTCGGACCCCGGC
CACTACGTCGTCTTCGTCGAGCTCAACGCCGCGGCGGCGGACGCCAGCGCCGACGCGCTG
CAGGGGTGCTGCGACGAGCTAGACCGGTCCTTCGCCGACCCAGGGTACGTCGGGTCGCGG
CGGTCGTGCGCCATCGGCCCGCTGGAGCTGCGGGTGCTGCAGCGGGGCACCTTCCACCGG
GTGCTCCGCCATTACCTCTCGCTGGGCGCCCCCGTGAGCCAGTTCAAGTCGCCGCGCTGC
GTCGCCCGCTCCAACGCCGGCGTCCTCCAGATCCTCGCCGCCTGCACCGCCAAGGTCTTC
TTCAGCGCCGCCTACGACTGACGCAGCTGCGTGTCGTGCCTCGTCTGTGTGTAAGATGTC
TCATGAAACGTACGTACGTAGCTGCGATGCAGGATCATGTGGTTACGGGGTACATGCATG
ATGCTGGGAAGAGCAGTACAGAGTTGTCCGCAGGTGAAGTTGCGATGTGTCTGAATGGCA
GCGATGTGTGTCTGTTTGTGGTACGTGCTGTTGCAAAGTGTGGCCACCGGCCAAAAGTGT
ACGTGTCTACGGGTTCAGTCTCACGCATGTGGCCTGTTTGCAAGGTGTATGTACGTATGA
AATAAACTTGTCGACTTGTCCGCGCAGCATCTGAAAGCACGCAGCGTTGGTGACCAAGGG
CTCTAGCCAGTACTAGCATATTCCTCGACATCCTTTCTTGCCATGTCCGATCAGATTCAG
ATCCGTCCGACCACATGCACACGGATGCACCCAACTCGGTGATCTGGAAATGGTTCCTGT
ACGTACGTACGTAGAGAGCACAGCTCGTAGTACCCGGGCTGATCATCGTACCATTTCAAA
TGAAGCTGGTCATGCGAGGAAAAGACTCCACGTCAAGAGAGACAACGGATGCACCCTTTC
TGCCTGCCTGCGGTTGGGAGAGCAGAGCATTCTCTCGCTCACTCGGCCTCCCCGGGCACG
TCACATGCATGGCTGTGGCTGCACACCGGCAACTCGCAAAGCGGCAGCATCGTGCTTGTC
GATAATTGAAGGCCGCTGGGGATATGGTCGTCGATGGGCCAGTGCCAGGGGTACACAGGT
ACGCGTGCCCGCGTGGGTTGTGGGTGCCTTACGTGCCGGCCACAGGGGCCGTTTGCAAGT
TACACCTGTGCGTGGTGAAAGGGTGGTGTGGTTGGGGCCAGCCCCGCCGCGCGGGCGCCG
TTAATTGGGTCCGACGGGCGCGTGGGCTTGTGCGGCAGCAGGCCAGCGGCACATGCAGAT
GAGGCCCTTGAATGGTTGATGTGAGGGTTCGTGACTGAATATCACTCGTGTTGTTTTTCT
TTTCTTGTTAAGCCCTCAAGTGTAGTCGTTCATGGGCTAGGAATTACCCGTTTTTTCTCA
TGGTTTCCTTTGACATAGCGTTTCTACACCTTCTATTTCGGTCCATTTTCCTACCATACT
TTTACATATTATTTTATCTTACATTTCAAAAAAATAAAAATCTAGCGGCCAATACGGTCA
ACTCAGACTTGATAAAAACTTAGTTGACTAGTTTTAGCTAGATCGTTCTTTTATTTTTCC
AGTTCTTGCCCTCCCATGCGACGATGACAGTCTGCAATCGACCCCGACAATTTTTGTACT
CCCACCTCCTCTTCTTTGGCTTCAGATGTAAGTTTCTGTTTTTCTTTTTCAATCACGATC
GTTCTGTTGAAATTCGTAGTGGACCTTAGGCACATAAGAGAATTTCAGAAAATCTTCAAG
GGTCAAGTAGATGGTGACATGACAAGGTAGTGATCGGAAGTTTAGTCTCACCCTGTTAAT
GGAGAAGAAATTGGTCCCCTTTATAAGGGTCTCTTTTCCACATGCTATTGAAGAGTGAGA
AGAGAAGGTGTCCTCGCGCACTCCTCCTCCGCCGCCCGCCTCGCCACGCCTTCCGCGGGA
ATGAGCCGAGCCGAGCTCATACCTACGCGCT
