morexGenes - Barley RNA-seq Database

Contig contig_2547290

Source Contig contig_2547290

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_2547290 (2662 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_2547290

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_36757	2	1667 bp	AK376270	Available	Available	None

CDS Structure of MLOC_36757

Contig Sequence (2662 bp)

>contig_2547290 2662 assembly3_WGSMorex_rbca.fasta
CCACCATCAGCACAACCGTGCCGACAGGACGGACGACGGAGGCGCAGGCAGCTGAGGTGT
GGAACACGGCGTTCCCCTAGGCCGGCCCTGCACCTACGCTGGTCGACCTCACCCGCTCCG
ACGCCGTCGCCTAGGGCTGCCCTCGTAGTTTTAGTTTGTTTTTATGTTTAATTAGTGTAA
TGCGGACGCGTGGACTCTCATCGGCCTTCATAGCCGGTTTTTAATGTTTAATTATGCATT
TATATATATATTTTTTCACACGCCGGTAAAAATGGGTCCGACCAGTGTTGGGCGCATGCG
TCGATCCATTTACGAAAATGAATGTTTGTATCCGCCTGGCCGATCCAAACGAACAAAAAA
CGGACAAAATAGCCGTCCGTTTGGATCAACCGTTAGAGTTGCCCTAAGTGCATCTATTAG
TATCACACCGTCTCATGGGAAATAGGTCATCTCAACAATATACCCGTCCCGTATCCTTCA
AACCAAACATGAATTTGGCTATCTTCAACCACTTGACATCCCTTCCAACCGAACAGAAAA
AGAGGCCATCCATAGCCTAGTGGCTGGGATACCCACAACCACTCAGACATATCCCCCAGA
CCAAACACACCCATATTGTAGAAAGGTATCCCACCTTCTAGACGGTTCGCCCCAACGAAT
GGAGCTAGCGGGACGAATTAAGGTGAAAGATACACCTGCACTCTTTTATATGGACTTATT
CCACTTGCCCTAGAAGGTTTTAGGATACTAATTTGTATACGAGTAAGAATATCAGGATAT
TTTATACAAACTTGGATCATATAGACACTTTAAACGACCAAAACCATAGCATAAAACATA
GGGCAGTCGTGTTATGGAGCCAAAAGGGCTTGCCTAAAATTATCCTACCTGATACTGTAC
ATACAAGAAAGAAGAAATGAAGGAGTCACGTTGATTCCCGGCAAAAATTCTACACACAAA
CAGTTTATCAACCTACAGCCCCCCACTGCACATTTTGTCTCACTCAGAACCAAACTCACA
AGAAATGAGGAAATGATGAGATGCGCGGCAGATGCGTAAGCAGGTCCCCAAATGGTTCTT
GTCTTGGAGGCAATGAGTCATTGCCACTGTCTCCTCCAACCGGAGGCGCATAAGGTTGGG
GCTTTCTCTCATAAATCTCATTATTACTATGAACACCAGGGTTTATCTGGCCTGTGCCTG
AATCTTTGTGGATCAATGAGCATAGAGAATTGACCCTTGACATAAGCATCCTCTCATCAG
CAGCGATAGTGATTTGGGAGTCATTTAGAAGTTGCCGGGTCAGCTCATCAAATGCTAATT
TACCCGTGGAATCATGGCAACCGTCGATGATCTGAGAGTCGTTCAGGAGGTACCGGGTGA
TGTCGTCTAAGGCCAGTTTACCTGATGTGCCAGCGCCACCATCAGCTGCAGGTAGGTTCC
CTGAATACATTTGTCTGTAGATGTGGTGCCCAATTTGGTTAGCTATCTCACTCTTGGACA
TCGAGCGCCGGATCCCTGGCAACTTAAAACCATTCCAACTAAGGATGCTTGTAGGTGGTT
CACACACACTGGAACCACTGTCTTGTTTAATCAGTTGACCATCAGTAACTGGAATGGAAA
AATGATTCTAGTTGTAATTTGTGAAGGAAAAAATAGAAAATAAATTCAAATCGATCGGCA
CCCCAGATTACAGAGAATTTCCCTGTTCCTGAACTGTGACTTTGATTCGGTAGCATAGCA
CGACCATAGATGTTGTCAATGAAAAATGTTATTTTAATAAATATTTTTTACCTGAATTAG
AGAAATCTCGAGGCAAGCCAGCTGATGTTCCAGCTTCATGTCTTCCTTCAGCTTCTAGCC
TACTGGATGTAGAATGATGCGGCACTAGTTCCCTAAATCTTTGGGGGGCTAACTGATCGT
CATCATCTTTATCATGCTCAAAATTTTGGCACTTTATGTCATCTGGTTCTTCAAATATGG
AACATCTTGATTCAAAGTACGGGTTCTCCAACGTGATGTCATTTTGCTGGCTTAGCGAGC
ATAGACGTGGGTCACAGTGAATAAGCTTCTCCACATGCTTATTCATCATTCCTGGCGCAC
ACTGAAGAAAGTGCCTCCTGAAATAAAGGATTTTCAGAAGTTGAGGCAACAGTGTAACTT
CGTGTATTATGAAAACCTAGTTGATTGTGATGTAGGCCTGAATCTGTCTTCCACAACGGA
TTCTCAAGAAACGGCGCTAAAATCCACTATGCCATGTCACGAAATGTCCCATAGAGCGGC
ATATTTGAATGTGAAGTTCACAGCATATTCTCTTTTTTTTCTCCGCATGAAAATGTGTCT
CATTTGTATTAGAAGAAGGGACCGAAAGTACAACCAGGAAATTGAAGAAAACCACAGAAG
GACCAAGAAACCAGGCTACAAAAGCTAGGAAAAAAACTAGCAAAAGCCTAATTAGCCTAT
CTAATAGTAGAACAGAGGAAGCAAAAAGAATAACAGACATTCACTGCATATATTCTACTC
CCTCCGTTCCATAATATAAGTCTTTTTAGGGATTTCACTAGAGGACTACATACGGATGTA
TATAGACATACTTTAAAGGGTAAATTCATTCATTTTGTTTTGTATGTAGTCCCTTAGTGA
AATCGATTAAAAGACTTATATT