Contig Data
morexGenes
Links



Map Locations of contig_2547289 (4096 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547289

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36756 1 553 bp MLOC_36756.1 Available Available LOC_Os10g32880.1, FRAME:-3, EVALUE:3e-16, 13110.m19364 protein WD domain, G-beta repeat domain containing protein, expressed
MLOC_36754 1 581 bp None Available Available None
MLOC_36755 1 810 bp AK251272.1 Not available Available None





CDS Structure of MLOC_36756






CDS Structure of MLOC_36754






CDS Structure of MLOC_36755






Contig Sequence (4096 bp)

>contig_2547289 4096 assembly3_WGSMorex_rbca.fasta
TATTGAGGAACGGAGGGAGTAGATAAGAGAATAGATATATAAGATGAAATATATTGTCGT
GTAGTGTGTGTTTGTATTGAGACTTTTGAGCGGCACTAGGGTGGTCACTTCCATTGAGAT
TAATTTATGAATCCCAATGGACATAAATAAATAAATAAATAAGCTTCCGCCAGGAAAAGC
TCTTGGTGTCTGTTTTTTTATGTGTCATATTCTTTTCAGATTGTGAAATTTGTTTTCATG
TTGGGCTTATGCAAAAGTCTGTAATGGTGCCAATGTGTAATTTCTGTGTAGTACAAGTCA
TATATACAAAGTAAAGGTTTCAGTGGGTTTTCTCCTCATACAAAAGGAGTTGCAACTAAA
AGCCCGTCCATATTTTGTAGACTCCTTGTACCAGTCAAGCTGTCAAACTCAGCAGCAGCA
AATACAGTCGCGCAAGTTAATGGATATATCTGAACATTGCTACTCCCTCCCAAAAAAATA
ATATTGCGCGGCTTTAGTTCAACTTCAGGTCAAATTTGAACTACAGCCGGGGAAGCTCCT
GGGATTCCAGGAAGGTTTAGGCCTTGTGAGCATCTCCAAACGGCCAGAAAATAAGATGGT
CCGCCCTTATTTCGGCTTGAGGAGTCGTTTTCTCGCTATCTTCTTCGTCCAGATTGGATA
ATTCGATTCTGCTCCCGGTCAAAAAAAAAACTTAAAAAATTCAATTTTTTTGTGTGGTAG
ATAATTTGATGCGTGAGGTTCGATTCAAATTTCATCTTATCTGGACATCTGAGCAGCTCT
TGGAAAAAAGAAAAAAAGATAAATCGGGTCCAAAAAGTTCGTGAACAGTAAACCTTTTTT
ACAGACCCAGATTTGTCGTTTTTGCTGAGAGCGCCTCATATGCCCAAATGAGTATAATTT
TGAAGCGAACCTCACGCACCAAATTATCTATCACACAATATTTTCTGGAATTTTATGAAT
TTATTTAGTATTTGTTTTGATTTGTTTCGTCGAAACGGGTGCAAATGAGCTCGGGGCCCA
AAACGCCTCTCCCGTCTAGATTAGCCTTTTATAAGTAAGTAGCCTAGTAGGTTGTCTAAG
TTTCGGAAAAGGAAAAGGTGCTTGACACAATTTTTTTATTATTATTATTGGAGGGAGTAG
CCTAGTCAAGATATGGAGTGTGTCGTGATTGGCACGCTGCTGCACTGCCGGGCCGGACGC
CGGAGTCTCTCTGATTGATGCTACACGGAGTAGCTCCTAGCACACGATGTGTTTTCCGGT
GTGGGTCGCTGTCGTCGGCGTGCAGTGTATTTCAACAGCGCAATGGGGTCGGGTCGATCG
ACGGGAACGCTGGTTGCCTAGCTTAGATTACGACGAGCGACCTCGACTGACCCATCGTGG
TTTACCACATATGCATCCGTCCATCCATCCATCGTCGTCAAGGCAAAGCGACAGCGCCGT
GGATAGCTCACCAGTGACTCAGCTGTGACGCTCACCTCGCTGACCGCAACGTAAACATTT
TGGATGCTCAACCTCTGCTGGAGGAGAAACCCCCTAAAAATCCATGTCGAAAGGCTGTCG
GATCGCGGAATCCTCGACCTCGCTTCGGCCTGCCTTGTACACTTACAAGTTCAAACATAT
ATATCTACCTATACATGATAAATCCAAAACCTAGGGCGTTGTCTCCACGCACACCCCAAA
ATGTGAAGCTCAAACCCAAAACCCTAGAAACCCTTTGGCATCTCACACATTCCGCACGGC
GTCTCGGATTACCAAAGCATGTTGCTCGCCCCACAGGTTTGATCAACTGCTCGGACCGCC
GGGCGGACTGCTTCCATTCAGGTTCAGCTACATACACTCCTCTTTCAAATGCATCCTCGA
CAACACGGTGCGCGAAGGGGGCCAAACCACGAAAGGCAAAATGCTTGTGGAACCGTGATG
AGAATCAGCGGCGTGTATCAACGTCTACTCATTGCTCTGCCGATTCTGGTTTTGCCTCCT
CCATCTGTTCGTCTCCAGGGAGCCCGAATACGCGTAGGTTGTGGTCCATGGAGCCTACGG
CCACATACTTAGCATCTGCCCCGAACTTGACCGATGTCACTTTCCCTGCGAAGGACAGAC
ACCCATGTTAATTTACCCTCGGAAAAGGAACCCACGACACTGGAGAAGAGCAGATTTAGA
TACTATGTCAAACCTGTGCCGGATAAATCTGGTAATGTCTTGACAAGATTCCACTCCGTC
TTGACATTGGCCACTTGGTAAACCCTGCAGCCATTATGCATGCTCAAGAGGTTATATTCA
GCACAGAGCTAAGAACATATCATGAGCTGGGCAGAATCCCTACACGACATCAAGCCGTTT
CATTTATTGCAGTATAACAATGCCGATAAGCTAAGTTGGATCGGTCGGTAGCGTACCTTA
TATCAGAACCAGCAACAGCGATATAACTTCCACTGAAGTCGAATTCCACTGCAAGAGAAA
ATGTCTTGTCATTCATGAATATATGGATTCTGGTTCGAGGGAGGCCTTATTTCACATTAG
TTTGAGCAGTTTTCTTCCAAATTTCAACTTGCAATTTGTGTAGAAACACAGGAAATCCAT
ATTTCTCAAAGAAAAATATACAGATCTCCTTACCAGAACTTGTCGGTGTATCTGGATCGA
ATGGAGAGAGGGTCCTAAAATTCCTCAACTTTCGTAGATCCCAAAGCTTCACACCGTCAA
GGGCTGCAGTCTGCAAGGTGATGGTGAAAATGTCAGTATGAAACAGCAGGTGATCCAGAG
TTATTGTGCAAAGATCTCCACTTCCGCAGAATTTGATCTTATAAAAAACGATAAGAAAGA
ACATACCGCTAGGAAATATCCATTTTCTGAGAAGGATATAGCAGTCACTGTTCCAACATG
CCCTACCTCCCCTTCAAACTTTGCAACCCTTGTCTGCAAATATACATTTTCAATATCACG
GGATGAGAGACATTAGAAGAGGATGGCATGGATATCAACCTGAATTTAATCTGAACAGTA
TTTTTGTCTTGTCTTACCTGAGATTTTACATCCCAAATTTTGATAACACCTTCTGATGTG
CCTGTTCCAAGGATAAGACCATCCGGGTGGAAAGCTGCTGATGTGTATCCATCTTGTCCA
GAAGCCTCGCCAACCTGAATAACAGCACTTATCAAAATGGTAAATCTCTATATGTACATG
CTTCTGGGAATTTATGCAAAGTACCAGACCTGTGTGAGGCAAGACCCTGTTGAAATATCA
TAAAAGCACCATGTGTTATCTCTGGAGGCAGTTGCAAAATACTTCTGACTAGCATGGACC
GTGACAGCTTCAACCTGGTATATTTCCAAAAAGAAAAATCAGAACATAAGATAATACAAC
GAGCAGCATCAACAGCGAGATTATTTAAATAACAGAATACAGAAACTGCACACTATCCAC
ATGAAATGATCGCAAGAACATCCTCGGCTAGCTAGCATGGCTGCATGTACGAAAAGGGAA
CATGCCAATAGTACTGTAGCCAAACCATATCCATACTTAAAAAAAAGGTTCAACATTGAC
AACTAACAGAGAACTATCTGTTTTTCTAGATCTCAGATATACTTGCAGTATAGTTCTTGA
GATAAACAAAAACTTGAGATGCTCTCAACATATTGCAGACTATTTTCCTACTTATCCGAG
CTCATTCAGCCAACAAGTAAAACTGACAGTATTGTATGCAACAGGAAGTTAAATACTCCC
TCCGTCAGCACAAACTAACCTCTGCAACATGATCTTTCATTGTGTGCCTGCAACCATAGC
TTCCATCTTCATTACCTTGCCATAGACGGACAGTCTGCAGAGCATACAAACAAAAGAGTG
AAGCCCTAATTACCAGAATGAAAACTTGGTGACTGCAAAAGTTCTTCAAGAAGTCATATT
GATAGAGCTAATATCACATAATGATTTACTTTACTACTATGCAGTATCTGTAGGTGTACC
TTATCTGCTGATCCCGTTATCAAAAGGTCATCCCGGAGAACAAATTTCAAACTGGTAATC
TGTGCATAGGAATAAGCTAATATTAACATATGCAGATATTAAGGAGAGGAGGGGGGGGGG
GGGGGTTGGGCGAGGG