Contig Data
morexGenes
Links



Map Locations of contig_2547196 (4957 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547196

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36693 2 1832 bp AK365263 Available Available None
MLOC_36694 2 630 bp MLOC_36694.1 Available Available None





CDS Structure of MLOC_36693






CDS Structure of MLOC_36694






Contig Sequence (4957 bp)

>contig_2547196 4957 assembly3_WGSMorex_rbca.fasta
CGTATAGCATACAGTATACGAAGTTATGCGACGCCCGAGCGGGACTTCGCCGGCACGCCC
TACGTGCCCGTCTACGTCATGCTCCCGGTAATCCACACGCCCCTCTGCTCCTCGATCTGT
GCCCTGTGTGTGTTGCGTGTTGCGTGTGTATGTATGTATGCATTTGCCATTGCTGACCTC
GGTGCGTGCTGTAGCTCGGGGTGGTGAACGTGAAGGGCGAGGTGGCGGAGGCCGACGAGC
TGGTGGCGCAGCTGCGGGTGCTCAAGGCGGCGGGCGTCGACGGCGTCATGGTCGACTGCT
GGTGGGGCAATGTCGAGGCGCACCACCCGCAGGAGTACAACTGGACCGGATACAAGCGCC
TCTTCCACATCATCAGGGACCTCAAGCTCAAGCTGCAGGTCACACGTCCATCTCTGAATC
GAATTGTTAGTGTGTTGCAACAAGGATGTACTCCATGAGTTTGAGTTTGTTTCCTGATTT
TACCTTTCTCTGCTCGATCGCGGATATACTTAGGTGGTCATGTCGTTCCATGAGTGCGGA
GGCAACGTCGGGGACGACGTGTCCATTCCTCTCCCGGAATGGGTGATAGAGATCGGAAAG
AGCAACCCGGACATCTACTTCACCGACAGGGAAGGAAGGCGAAACACGGAGTGCCTCTCG
TGGGGCATCGATAAAGAAAGGGTTCTGCAGGGCCGAACCGCCGTCGAGGTACGGTCATTT
CACTGCATCCCGATGGATGATAAGTTGGAATTGGAGAAACCAGGAGGGACTTTGTATTTG
TATATGCATGCTTACTCATCTCTTCATCTTGAATTCCCACCAAATTGCTGCACTCTGTTT
TTGAATTGTCTCCCGGCCATGTCCCAACTACTTGATGTCTCCAACTAATACCCTCCACAT
TATGCTTTAGGTAGATCTGTTACTTGTGAACTCACTGGTTATCTAAATGTGCAATGCCAC
ATTCCTGAATTCATGAGCATTTGATATACAAAAGGTCCAGGGAACATGAGATTTGTCATC
AGTGCCCTGTTTTTACGTACTTAGGCTCTGTTTGGATCACCGTTTTCGTTTTAAATACCT
CCGAAAAAATTACATGCCACGGTCGGTCGTTTTGTTTCCGGCCGGAAATTGCTCATTAGC
TGGTAAGTTACACCTGTAAACAAAACACCTCCGTATTATTTTACACCCATCCCAAGCGTG
GCCTTAATACACAGAGAAGGAACTGCCGTGGTTTGTTTTAGAGGGTCTTGAATAAACAAG
CTGCACCTGCTGTATATTTTCCACGTGTTCTAGTTTTATAGTGGGTATATCATGAAACTG
TCTGCTGTCATGTAGATGCCGTCTTTCCGTGTTCAAGAATTTCAGTTTATCGGAGGGTTA
TATGTGTTTCTCCATTTCATCCCCGTTGATTCCTGTAGGTGTACTTTGACTTCATGAGAA
GCTTCCGAGTAGAATTTGACGAGTATTTCGAGGATGGGATTATTTCAGAAATTGAGGTTG
GGCTAGGGGCTTGTGGAGAGTTACGGTATCCATCTTATGCAGCAAATCATGGCTGGAAAT
ACCCTGGCATTGGAGAATTTCAGGTAAAGCCCCACCCTTCACCTTAGACTTCCATTCTTT
TCAGGTTTCAGTATCTACTTCAGCATCGTCAATTCATGCAATATCATCTATATCATAATG
TAAAATGGGTTTGTTGAGAATGTATTTTGCTCCAGTGCTATGACAGGTACTTGCAGAAAA
ATCTGAGGAGGGCCGCAGAAGCACGAGGACACGCCATGTGGGCAAAGTCACCGGACAACG
CAGGCCACTATAATTCTGAACCAAACAACACAGGATTTTTCTGTGATGGAGGAGATTATG
ATAGCTATTATGGCCGCTTCTTCCTCAACTGGTACGCCCAGGTGTTGCTGGATCATGCAG
ACCGCGTGCTGATGCTAGCCAGGTTGGCCTTCGAAGGCTCAGCTATTGCTGTCAAGGTCA
GCTATAATCATCAGTTAGTTCAGAAAGTATAAGTACATATTGATAGCTGTATTTGGCGCA
TTTGCCCCTGTTTCAGTATGTTGGTCTTCCTAGTGTTGAGATAAAACTTGTATTTGCATA
GGAAGTAAACTAAACGACTGGACATAAAGGTTCGCTCTTGTGACATGAGCAGGTGTCAGG
TATACACTGGTGGTACAAAACTGCTAGCCATGCTGCTGAGCTGACTGCTGGGTTCTACAA
CCCATGTAACCGTGATGGCTACACTCCAATTGCCCAAGTATTGAAAAAGCATGGCGCGGC
GTTGAACTTCACATGCGTTGAGCTGCGCACCATGGATCAGCACGAGGTGTTCCCTGAGGC
CTTGGCAGATCCAGAGGGTTTGGTATGGCAGGTACGTCTACAGAGATGCTTATCATTCTC
TTTCGCAATTTCTTAGCGGCATTTTTAGAGTGCTAGTGTACTGTCTGGTCAGTGAATGTT
TCTCTGACAGCAATGCTTGAGCAACTAGCTAGCTGGCAGGGTTTTATCCAAACATTCGGT
TTCGCACATCATGTATTATTCAACAGAATTTTCTGTTCATTACTTAAGAGCAGACATCTT
GATGGCAATATCTCAGTGTTTGATCTGTTGGAATATATATATGGTCTGTTATTCAGGTGC
TGAATGCCGCGTGGGATGCCGGGATACAAGTGGCCAGCGAGAACGCCCTGCCTTGCTACG
ACAGGGACGGCTTCAACAAGACCTTGGAGAACGCCAAGCCACGGAATGACCCGGACGGGC
GGCACCTCTTCGGCTTCACCTACCTGAGGCTCTGCAGCACCCTCTTCGAGGGACCCAACC
TCCCCGAGTTTGAGCGCTTTGTCAAGAGGATGCACGGTAAGATTACGTGATCTCTCATAA
CATCGGCGTCCCAGCCTTTTGCCTTCCGCGTGCCCTGACGCTTACGATCTCTTGTGGCGT
TCTTCGCAGGCGAAGCGGTTCTGGACTTGAAGGCGTAGATTGTTAGGGTGTTACATACAT
GAGTACATATAATACACAAGACATTCTTGTTGTCCCAGGCCTTTGTTATGGTTCTCGTTG
GGGAGCCACATGTGTGCCATTTTTGTCCCGCGATAGGTTGATATTTGAGCTATATATTGA
ACGGAATAACGCCGCTCTAGGATGTAAACCATATCTTTTCATGCATATAGTCCTAGTTAT
TATCAAGCTCGAGGATCAGAAGTCGGTTGCCTGTCGAGTGGCTGACAACAACCGTAGCTT
CTGTAAAAGGTTTTGAGGCTGTGCAAATAAAAATGCTGATGCTGCCTTCTCTCTCTTGCT
TATAGTTAAGCAGCATTGTACTTTTTTGTTTGGTATTGATAGGTTTGTGTCATGTGTTGT
TTTGTTGATGGGGAGGGATGCCAATTTTGTGTGTGTGGAAAGCTTGTTGGAATAGACTTA
CGTGCAGAGAACGAACTTATTTTCTCAAGGAATTTGCTCTCATTTTCCTGTTGTTTTATT
GTTATGACTTTGGTATTCGGACTTGTGCTGGGATCAAAAGTAGCTCTTATCACAAAATAA
ATCGAGCTGTCGAACCGAACGATGTTGTTCCATGACAAAAAATAAAATAAAAAACTGAGA
ACTGATCTATTTTTGCATATACTCCGCAGTTTGTCGATCAGTTGGTTATCAGTCAAATGG
CTGATGCAGTGAGCATCGTCGGGTCGTAGGTTATGTAAAATATTCGAGGTTTGTGCAAAT
AAACAATGCTCTTTCTCTCCTGTGACACGCATAATTAAGCAGCATTGTTGTGTTTCTTGT
ACCGATGATGATATGTTTGTGTCATGCGCTCTTTTTATCGATCGAGGGCGTGTTTACCGT
AAATAAATCTCGACAAAATCAAAAGGGTATGAAAGCGGAAGAAGATCATGGTGCCACTTC
ATTGTTTCCTCTTTTGTTCTTTCTTTCTTTCGAACTAACGAGCTTCCTCGTTCGTCGATT
TCCATTATAAAAAGCCGCCAGTTTCTTACAATCAGAGTAATACGAACTCGAGGGAAACGA
AATAAATTTGTTTTAAAGTGGCATGGAAGTGATTATCCTATTTTTTTTTAAGTTATTAAA
TTTTTTTTTGAGGGAAAAAAGTTATTATTGTGAAGGAGGTTCCAAAAGCTTGCTGCAGTC
AACGGCGGCCCCAGGCCCAGGACAGCTCGGGCCATGAGGCCCAATTCCTTCGTCCTTAAC
TAGAAAAAGAAAGTGTCTGGCCCGAGCCCACCAAGTCCGCCTGAGATTTCTGCTGCGGCG
AGCCAGCCGATCCCCAAATCCGGGACAACGCCGGCCGCCATTGTTTCCTTCCTTCCTACC
CACGGAGTGCCGTGCTGATGAGCTGGCGCGCCGGTGACCGGGAAGGACGCGGGAGGAGGA
GGAGGAAGCCGGCGGCCACTGTTGACGGTAAGTGCATCAGCTTTTCTTTTCACCTATTCT
GGGGGCAATTGATAAGCAGAGGAACATGATGCGCTTGGCGGGCTTGTAAAGGAGAAGGAG
CTCACATATTGCTGCAGATGTTGGGTTCCCGGAGCAAACATATCGGGCTCGGCTGGATAA
CGCCGGCGGCCACGAGGTGGATGAATGTCTACTATCATCAGATTCACGGCTGCCTGAAAA
AGCACCAGCATCAGATTCTCAGATAGCCAGGAAGGTAACATCTAGGCTTGTTCCCGGAGC
AAAAACCGACTTGACATTAATTCGATGCGGTTGTTCCTTGAATGAAAATTGTGCTGTGCT
GTGCTGTGCTGTGGGTGTTGTTTCTTTGCGTTACTAGAAGATCACTTGATAGAGTTCACA
CATGTGTGAGTAATACGCGACAAAGGGCTGAAAAATAAGCCGCTCTTAAAATTTGTTGAG
GCTTCTAAATTAGTTATTCCATAACTACTCCCTCCGTTCCTAAATNNNNNNNNNNNNNNN
NATTTCACTATGTGTCTACATACGAAGTAAAATGATT