Contig Data
morexGenes
Links



Map Locations of contig_2547195 (6328 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_2547195

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36692 4 2152 bp AK370249 Available Available None





CDS Structure of MLOC_36692






Contig Sequence (6328 bp)

>contig_2547195 6328 assembly3_WGSMorex_rbca.fasta
TCTCTCACAGTTTCTAACTCTCCAAAAGGAAGTCTTGACCTTGTCATCATCTTCCTTGAT
GAAAGAAAAGGAGTCTATCCGAAAGGAACTTGAAAGAGTGAAAACAAAGTTAAGAGAGAC
TGACAACAAGCTGAAGAATTATGTTCAAGAAAAAAGAAAACTTGAGGTTATTATTTTGTA
CTCAGTAATTTGATCGTTCATTAGGTTGGCACAAATTCAGGTGTATCTTCTCCAAAGCGT
AGCAAGTATGAATCCATACTCTTTGTCCAGGGTGAAAAAGCAGAGGCACACAGAGAAATA
AAGAAGTTACAAAGCCAGAGGGCCCATCTTGAACGTGATTTAAGGAAACATGATTCTCTC
ACTGTTGATAAAAGACATGAAATGAATGTGAAGAAGCCAGAAGAACTTGCTGGATTTTTT
GATCAAGCTGTGCAGTTGGAGGTTGCAGTCTTCCCAATTCGTATTACTTTGTGCAAACAC
ACTATTCTTAAGCACCCTGATACATGTTCAGGTGCTGGTATGATATTGTTATAGCAAGAC
TTACATAAATCACCACTGCTCCAGGAATAAACCCAAACTGCCAACTACACCTCATATCAT
ACCGTGGTTCTAGATTATATGTTTCAGACAGCTGCACATTAGTAGCTGGGTGTACCATTG
TGGATATAACATCACTTGTTCCAAGCTACTGGCTAGGAAAAACTATATTTTTGTAATTAT
AGTTTATTGCTCTCATACCTTGTAGTTATGCCACAAGTTTTTTTAATAAGCCTGGTGTCA
GTGTCTCGTTTCTTTGTATCCAGAAGGTTCATCATTTCAGTTGACTTGCAGTCAGAAAAT
GAGTGCCACCTATATGTGTCACATATGTACCCCCCTCCGTCCCGTAATATAAGATGTTTT
TGCAAGCTGTTTTAGCTTGGAAAAACGTCTTATATTGTGGGATGGAGGGAGTATGTATTA
CAGCATGAATGGCATGCAGTCTGTTCTTCATTTTACTGGAGCTTATGTTTATCTATGACC
GTGTATCTTGTTTGTTCATATTCAGGAGGACTACCAAAGGCTTGAGATTCATGCTTCTGA
TATGGAAGATGAAATTGCTTCTTTGCAAGAAACTTTAGCTACCTCAACTGCAGAGAAGGA
AGACGCACTATCTAAAGTGGAGTTTATGGTGTTGGAACAGGAAGATCTCGAAAACAGGCT
TACTTCTGCAGAATCAAAGATAAATTCCTTGAACGACGAGATTGCTGTATTGGTATACTT
AAAATGGTTTTGCAGCATATTTTGCCAGATCCCCCACACCTTTTGTCTAACCCCATTTGT
TTTAACCATGTAATTTCTTGTCTGTGATACAGACCAAAAAACTTAATGAATCTGAGTCTT
TTGGTAAAAAAATGGAGGCTTCTCTCAGTTCTGTATCAAAGGAAAAAGAAGACTTGGGAA
TGGTAATTAGCTTTACGGTTTTATCCAAAGCATCGGCGCTTTCCGTAATTTGTTTCATTT
TTTGTGTTCTGAAATGCAGCAACTTACTGATGTTCTTCTGGAAATGGAATCTGAAAGATC
AATGTGGATAGCCAAGGAGAAAGCATATTTAGAAACTAAGCAGCAATTGGATATATGCAC
TGATGAGAATAGTAAATTATCAGAAGATTTGATTAAGGTACGTTCAATAGAGTTCTCTTG
ATTACATACCTGCCAGATCTAATTCATGATCAATCCTCAACGTTGACAATTAGCGTGCAG
ATGCTATGTGGATATCTTCTAACTGGTTTTTTGTGAATAATTCAGTTCTGTCTAGTTTTG
GAACACATTATGAATATCAACTGATGCTGTATCTATAATTTGAGTTAGGCAGAAGTAAGC
ACTGTGCACGCATGCTATCTGCAGTTCAGAATTATTCGACTAGTGATCAGTTGATCAGTA
AGCAGTAGAAGTTGTTAGAAACTTCATACCATGAAGAAAACATGAATTAATATGCTTTGC
CATTTCGATTTGACAGCTCAAACTAGCTTTTCAAGTTCCTCTTGTTTATTTGATCCATAT
TGTACTGTATTTAGTACTCGTAGAAGGATATCACTATATTTACTCATTTTGTTGTTCTGT
TTTCGCATTGTTTTATTAGACATTCATTTGCCTGAATTGGTATACTGGAACAAGTATGGG
GTACTGCAGGATGCCTAATTTTAGTTTATTTTTTGAGTTCATGTTAGTTCCATGTCTATT
TTCATCAATATTTTTACATAATTGTCTGTTTCTCAGTTCTTAGTACTTGTATATTATATT
TGAATATGTCACAGGTGAGACAAGATCTGGTGCAATGTAGAGAATTGTTGAAAACTCTTG
AAGACAAAATGATCCTTTCTGTGGAGCATAACATAAATGAGGAAAAATGCTGGTCAGTCT
TCTTTTTTTAAGAAAACACAAAAGAGTTTGTGTTTCATTTCATGGACCGGGGAGAGAACA
TCAGTACAGGTACAACCTCCCAGGAGGAGGGACACACGCACACACATCATCGTCCAGCTA
GACTCAGAGCCTCAAGGCTGCGTCACAGACGTTGCAGGCGCCTCCGAAGAAGACTGCATC
TCCAGGGCTGTCCGGGCCAACGTACCTTCCACCCATATGTGCCTAGGAGATGGCAGGACC
CAGCCAGAACTAGCGAAGCCATCGTCTTGGACATGCCGGCGCCGGCGTACATTGCGCCCT
GGATTCCCACGCTCTATGCTGCAGCCCTCATCACAACATTGCAATACCAGCAAGCCTCGC
CGGAAAGACCGGGGAGGCCACCATCTCCAGCTGCAGCGTCGGGGACTCCAAATGCGACCG
AAGCAGCACCTTCAAGAAGGGAACGGCGCTGAGACGCCGCCGCTGCCTTGTCCAGTGAAG
GACCAATGGTTTATCCCGGTGCTCGAGGAGAGGATCTAGTCCGGGCCATGACAGCGCCTC
CATGGAGGTAACGACACCCTCAGGCGTCGCCATTGTCAGTGCAGGCCATCGCCACGCAGG
GATTTTGCCCCGGCACAAGACCAGAACCCCAAATACCTCCGAAGCAGAGCGGACAGGAGA
CGGGGGAGCAGATCGCCTGAGAGGACCACCAGCACCGAGAGGGAAACCACGTATCATCAC
CGTCGATGTAGGGAAGCACCGGCCAACACAGTGTAGCAGCCGCCGGATGGCTGCCAAACA
AGGCCGGACACCGCAGGGGGGCGTGTCGAGCAGGGCTAGTGGTGCCATCGCGGGACCTGC
CACCTGCATCATGCCGCCGCCGACCATGGCCGCTGCCGTGCTGTCCCGCAGCCTCCGTCA
CCCGGATCCGCCGGGCACAGCCAAGCAGCCGCAACCGCCCCCCGCCCCCAAAGGGTTGCG
CCGAGCCGCCCCCGTGCTCGCCATGCCAGATCCAGAGGCCCGGCCCTCTGGATCCGGGGC
CGCCATCGTGAAACCCTAGACCCGGAGAAGCACAACTCCGCCAGCCTCGTCAAGCCCCAC
GCTTGAGGGGGAAGGCCACCTGGGAGCGAAGTCCCGCTGCCATCGGATACGCCAGGGCTT
TGCCCAGCGTGGAGCACCGGCGGCGGCATTGGGAGGGGAGGAGGAGGGGAGGGAGGGATC
GAGGGCTGCGTCGCCTCCCAGGTCGCCCGTGGGGAGGGCGACGCGGGAGTGGGGGGAGGC
GTGAAACTGGCAAGTCTTCTCTTAGAACCTCTTGTCAATGCAACAATACCTCTCTATTGT
GCTTCAGTTTTGTATCGACTTGGTAAGTAACAGCATACGCATATATTTGGTGATCTAAAC
GCTCTTATATTTCTTTAAGGAGGGAGTACTAATGTAGTTTCATTCAATACATTTCACATG
GAGGTAAGAATGCTTCATATATTTTGAATATGGTTTGATGAGAAACAAAAGAACAAACCT
GAATGGTTATGCCTTACACCAGAACTGTACCTAAATATGATCGATGCACTCAAAATTATC
AGAAGTTCCTTTGAATCTTTAGAGCATTAGCAGTGAAAGCAATTTTAGAACACAGGCAGC
TACTCCAAATCTAGTGAACATAGTAAGTTTACAGAGTAAATCATCACAGGTTCCAAGCAA
TAACAAAAGCGTGGTGTGTTTGCATAGGCTCATGTACTCAACTTACTGCTAGTTATGTTA
TTTGATGCAGCAGGGAGAATTGTGAAGAATCAGAACAACTCGTGGAGAAAGGAAGAGATA
TTGATAATGAAAATGCCGTAGATGAAAATGTAAGCCTTAAGCCCACCCATTTTTGCTCTT
CATGTGAAAATTCATTTCTTTTACAAAATCAAGAAATCAAATTTAAAATATGTATTCATA
TTGTCAGGACTAGTTGTACACGAGTAGGTACCATCACCAGGACAGCTATGTTGCTTCACT
TTTCATGATCTTTCCCTATTGAGAAATGATTGGCTAGAGTTTCTTGCTATGACTTAGTTG
TCCATGGATCACATAAGATTGCTAACCAATTTTTTTTTATAATTAACAAAAAATTCAGTT
GATTTTCTAGGGAGTACAACTTGAGGAGATATATTTTCCAGCTTTTGTGTTGACTCTAAA
TTTGAGCAGGAACTTTGCAAGCAACTACAGCTTATTTCGGAAGAACGCGACAGCTTACTT
TCTAAGACGAAACAAATGAACTTAGTGATCAATGAATTACAAGCCTTAGTGGAGGTTTAT
AATAATGAGGCAAGTCAGTTAATTTGTTACAAGTTACAGTTATCTCAGTAAATTAAATTT
AATTTGTTTCTATATGCCATTTTATGCAGTTACTACAGGCCAAAGCTAATATGGACGAGT
TGAGCTGTCAGATATCTACCATGGAGGTCAAGATGCAAAATGTAAGCACTGTTGAACCCG
TCACTCTCTACGGTTGGTTCAGGCAGAGTATTTCTGCAGTTTGAGTTTTGAAGTGTTAAA
TCTTTCAGAATATGTGCCCGATTACTGTGCCGAGTATCAGTATCGAGCTTTGGAAATGAG
TTCATTGCGTCCTTGCATGCAAGCATGGTTCTTGTAGCAGCCTGTGCTTAAGACGTTTTT
GCAGTTCAATTTGAACTGCAGAAACGTCTTATATTTAGGAACATAGTTCAAGACGAAGAT
TTAATACTGATCTGCATGCCAGAAGATGGCCAGCCAGCACAATCTCTCCACAGTACCTAA
CATGCTTTCTTTCTACAGGATGCCTCCACCTACAACAAAGAGAGGACAAAGCTCCGCATG
CAAATCCGGTGGTTGCAACCAGAGCTCGACGCAAACCGTGGAAGGCTTAAAGAGGCGGTA
GAAGAAAGGGCGCTGATGGATGGGAAGTATCAGGAAGCAACGGCCATGCTGAAGAGAAAA
CTTAGAGAGACGTGCCGTGAGGTCCTGAGGCTGAGAGACGAGCTTAAGAGGCCAGAAGCC
ACACCAAACTGACGCAGTAACCTCTCTTCTTCGCAGCTAGAGTACTAACCTAGTGGAACC
GTTTCACATGTCGCCAGCAGCGAACATTGTCTCAATGCAGGTCTGACTCTTTCAGACTAG
TGCTTGAGCCGGCTTCATTAATTAAGTTTGCCAGATTGTACAGGCCTGGACCGCTGGTGC
CTCGTGCAACCAATAACTTTGCCAGCGTTCCGCTCAGAAGCTGTAATATACTCCGTATTT
GCTAAGGTGTCTAATGATTTGGGCTTGGACATGGACGGGTCATGGGCATCAGCCGTAGAG
GACGACTGGTACAGGCCGGACTTCACTCGGTGCTGTAGACCTCTAATTAGCTATCCAGAT
CCCAAATCCAAAATTTCAAAGATCGTACGTCTATGGGTCTTTGGCCGCCCTGGGCATTAA
AGGCATGGTTGCATGCTGAACAGGCTCGCAAGTACAGTACGTATACTCTTACGAGTAGGC
TGGTTGATTGGTTGACGTTGATCCTGAACATATAATCTGCTCGTGTATGGTGATGATTAA
GCATCTGAATGATCTAGTTCATGCATCCATCCTGGCTGTTCGGGAAATGGAATGCGAGGT
TGAGCCGTGCAATGTTACGAAACCGTGCTAGTATGAGTCTTGAGGCACATCAAACCACGG
AGGTCTCCTCAAGTCAAGAAAAGAAAAAACAGATTCGATCATGTTTTCAGTCTGCAGCAA
CCTTTCTCAGCAGTCGAAACGTAATTAGCGCGACACATGTGTTGCCAAGTGAATCACTAG
TAACTAGCAAAAGGGCAAAAGGGCCCGTGCGTTGCAACGGGAGAAAAAAATACCACACAT
TTTTAATCTTTTTTATAATCATTTTGATTTATTAAAATAATAAGCTAACTAATTAATGTA
ATCAACCCGTCCATTGTTAATTCCACCA