Contig Data
morexGenes
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Map Locations of contig_2547151 (5134 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_2547151

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36669 3 964 bp MLOC_36669.2 Available Available LOC_Os01g14980.2, FRAME:-2, EVALUE:4e-29, 13101.m01657 protein RPA3 - Putative single-stranded DNA binding complex subunit 3, expressed
MLOC_36668 1 1265 bp None Available Available None





CDS Structure of MLOC_36669






CDS Structure of MLOC_36668






Contig Sequence (5134 bp)

>contig_2547151 5134 assembly3_WGSMorex_rbca.fasta
ATTGAGGGGTTTAACCGGGATAATCCACACAAATTTTTTAAAATACACTAGTACCAAACA
AGGCATAATCGTCAGATGGGGCAGTTTTTTATTCCATTGTTTACCCATTTCACCAAACAC
GCTGTGGACGAGAGATAAATGAGGCCGCGACCAGCCATCGCCCGCGGCAACAATCTCGAG
GATGCCAGTGCCCATGGTGAGACCCCCGTCGAGGATGCCGGTCACTCTGGCCCGGTCTCG
AGCTTCGCTCCGGCCACGAGGATGCTGGTCACTCCGCCCCGGCCACGAGGATGCCGGCCA
CTGCAGCCCGACCCCGAGCTCCGCCCCGACCATGAGGATGTCGGCCCGGCCTCGAGCCGC
CAGTCGAGGATGCATGTTGCGGAAGACCAAGACGAAGGAGAGGCGACATCTCCAGTCTCG
ATCAAGACGAACTTCACGGGAATCTCATCACTTCCACGTTAGTTTGGTGTCGCACTCTGG
ATGCGATTGTGCGGGTCCTCTCCTGCAACACTCGTTCTAGCCTCGTCGGCCTACCAACGC
CACTGAAGACGCTTGCAGGGTAGAGGCAGCAGTGTCATGGGGTAGTGCTAGTTTGGAGGC
CGTAACACATGGCGGCGCTAGATGCGTCGACGGAGAAGGGCGACGGGACGCGACCAATCG
ACTGAGGGTGCAGGGGAAAGTCCGCTTGTTCCTCGGCCTGGAGAGATGCTTGCATGGAGA
AGGCAGCACATGGCCTCGCTGTCCTTCCCCCTGCTGGCCGGACTCGAGCTCCGCCCGGCC
TCGTCGTCCTTGCCCACATAGGCCGAGCTCGAGCTCCGTCCCGGCCTCACCTCCTTGCCC
ATGCAGGCCGGGAGAAGGCGCCCACCTCGCTGTCATCGTGCACCGTCCCGGGAAAGGGCG
TCCACCTCGTCGTGCACGGCGCTGGTCTTCCTCGCCATAGGTGTGCACGACCCTGGTCTT
CATTGTCATATGTGTGCAGCGCGTGGTTGTTGGGAGGAAAAGAGGAGAGAAAGAGGGCGT
TGGGTGCGTGGGTAGGTGAAAATAGAGGAGAGAGGGAAAAGGTGGCTGGCTGTGGGCCAA
TTACATGCGGAAAAATAGCGCCGGTCTCCCTAGCTCGCCCCTGGTGCGCTAAGTTTGGGT
TGGGAGCGTCGGCCAAAAATTTGGCTAAAACCGGTCGGCAGGAGATGCTCTAAGCATTGA
CGATCTGCATTTTGTGCCGTCAAAAAGGGTCTTATATTAAGTTATAGAGGGAGTACATTG
GAGCCCGTCACTATCTAAAGTTTTGATAAACCATAAGTATTTGTAAGTTTTGAAAATGTA
AATTTCTCTTAACCAAGAGCAACTCCAACTGGACAACCCATTTCATCCCAGCGCATCCGT
TTGGGTCGCCGCAGACATAAAACACGGTCCAACGTGGCGATCCAAACGGGTGCGCGTCGC
TTTTTGTTCGTCTGTGACCAATTCCACAACTAAATTTGGGCCACATTTGCGTTAGCACGG
ACATGAAGCGGACACGCGCCTTGTCCGTGTGCTCCTTCCCCTGGCCATCCGTCGACGACG
CAATCTCGTCCTTTTTATCCCCTTCCCGCACCCGTCGCCTGCAAGTGCACAAATCCTAGG
CTGACGCCCATTTTTTCCGGCCACCTTGCTCTCCAGCCCCCTAAATCCTCCTCTTTGATT
CGATGCAATTTCGGTAGCTTATTTGATCAATTTTGTATGTAGGGGATGCAACTTTTAGTA
TTGAGAAGAAGAATACATTAATCTATTGATCTCATGAAATTTACTAGATGTTTATAAGCT
TCTAGCTAGAATTGACACCTTTTGAGATCTAGCTGTTGTTGAGAATTTTTTTCTCATTTT
CCGTGCAAGATGCCCCCGGAATGAAATCCAAACACGCTAATACGAATCTGGAGTAACATG
GACGGATGAATTTCCTGGTGAGATCATCGCAACACTGGTCACAAGCTAGTCGCTCGAACA
TGCGAGTGGGCTATCAAACTAGGAAGGGGCATATTTACGCCCTGTTCGGATCCACAACCA
CGGCTTCTGGAGCGATGGGAGCTGCAGCACGGAGTTGCTCAAACCAAGTTCCTCGTGCGG
AGTGGAGTTGTAAGACCTGGAGAGGTTCCAAACAGGCACTGTGCTTGTTCGGCAATCTTC
CTGCTCCGTGAAAATAGAGGAAAGCCGAACATGGCCTTACCATGCCTGGGCATTCAACTA
CCGGTCAGTTTGGAGTACACTTTGTACACTTTGCAATGCACGCTCCTCATCATGGTGAAT
GGAAGAGTTCAGACGACAACATAAATCCAAGGTTTGCTTTGCTTACTGGTAGTTGCTACT
CCATCTGTAAACAAATATAAGGCGTTCTAAGTGATCTGAAACGTCTTATATTTGTTTACG
AGCGGAGGCAGCAATATGCTCATCTACTACAGGAGACACATACGCACAACACAACTGTCT
TCATAGTGCCTATTGCCTAATAGGTCCTAACAAGTGCCCAATGACTGATAACAGAGAACG
CAGGTGACTCGAGTAACATTTGGGCACCGATAAAGTCTGAGAATGCATGCTTGATCTGGC
AAATGACTTCCTCTACAGTACAACTTCCTTCACCTTGCCGTTCACCACAAGCTTGCACAG
CCCATTGAACACATCAGCATCTGCGACACAAACATGATAACTGGGATCAATGGTGTTACA
AGGGGGAGCAACGGTGTTGGCCTAAAGGAAAGCTGTTGCAATGTAAAAAAAACACTTCTG
TTTTGCCTGCAAGATAATAATAAAGATGTACATAAAACTTGAAGCCACAAGAAGCCTCCC
CAAAATGAAGACTTGTTTGCAATTAGCTGATAAAAGAATGCCGAAATGTTGGGCTAAGCA
CAGTAGCATATGAGCTATAGGACCTAAACTTTCCTACAGATATAAACAATATGTTAACCT
GAGATCTATTGTAAGATGGTGAACAATCGGACAGAGGAATTAGGCTCATTGGCTGAAAAA
TGGGTCCGCCCAAGATGACAAGTTAAATTGGAAAATTGATTTAAAATGATAAAAATCCAC
AAAAGATACACAAGTAGTAAATGTTCAAGTCCATCACCATTGTGTAAGTTTTCGTGGAAA
GAAATTCACCTTTGCACATTGACGAAAAACTCCCAGGAATTCAATTTTTAGAGCACTAAT
ACACATGGCATGAAAATTATTCGTTTTCCATGAAACTTTACAAGCATATACAGGACTGAA
GTATTTACTTGAATAAAGTTTTTACACCTTTTTTTTTACATTCAGAAAATAGTGTTCCTG
GGTGCACTTTTGAATTACCCCCATTTGGAGAATGAAACTAAAGATGTGAGTCATTTTGCA
TAACGACTCAAGTCAGTTCTGGCTTTAGATCTTAAGTATCGGACAATAGTCTTAAGAGAA
CAGAGGAACATAATTTCTAAATTCTAGAATCTTGCAGCCCAACATGAGCAATCACCTGTG
TTCCGCTGATGTTCTAAATTAAGTGAGTATGGATGAGAAATAGAAATATTTGCTCATACA
AATCAAGAATAGCAAAGCCAAAGAACAAGCTAACAAGTGTGCAGGTGGGTTCTTATAGCA
CTGAGCACTGCTAACTTTCAAAAAGAAAAGAAAAATAGTTCTCCTGTTCCTTACTGGTTG
TAATGGAATTTATTTTTTTAAAGAAAGGCAAATCTCCTCTGTTCTCTATGGAATTATGTA
AAACACACTAAAAAACTTGCATAATACAACCTCTATAGGTGGATCAAATGAAATCTCACC
AAAGTCTTCACCAAAATCTTTGGAACTTTCAGCAGTGATGGACTGGTCGTTGTCAGCAAT
CCCAATAACCTCTAGATAATTTGACATAAGGCCTTCCGTGGCACCTCTGATGGTCAACTG
ATGTCCATCAGTCGACTGCCCAACAAGAAGTCCACCTTGAGTGTGCTGGACTTTAAGTAC
TGTGCGCACTCTTTGCCCAACAAACATCTTGAGGGTCTCTCCATTAACGATTGCTGAACG
AAATGACGCATCACTGTCCATGTCTGCAAAGTGTAACTTCAGAATTATCAACTCAATTAA
ACAATATCAACCAATAAGAAGAGAACAAAAGAACTGCCCAGGCATCTCCTTGTCACAATC
ATCATACCAAGCAAGCACATGAACCAAGCATTGGCCGCATGCATCGTTGCGATGAATGAA
AAATAACAATGCATGCTAATTAACTAAATTGGCAGCTACGCTGTATGTCATAACAACACC
GTGATGGCTACTAAAATTCACTGCAGCAGTAGTATTCAAAACTGCCTGCTGTCATAACAC
GTCGTTAATCGACAAAAGGACTTGTTTCGAACCAGATCAATCACACGGTTGTCCATTTTA
CGTTTCAATGGCTTCTATCTAACCAGGAGCGTGCGCACAATGATCACTATCCTACAGGAG
ATCAGCCATGGGCGTGCTGAAGAAAGAACAAGAACAATAACCCAAGCATACGTTGGTTAA
TACCAGGACGACATCCATTCCAGTAGAACGACAGATTAGACGGGTGATAAATCGCGGAAA
CCTCCGGATCTGGATTCGACTGCACACAAAAATCAGCCCGGGCAGGGGCGGGACTGCGTT
AGGGTTCAGTTAAACCCCCGAAATTCCGGGAATACAATCTGCTAGTCAAATCGAACAAAC
AAATAACACAATGCGTCGGGGTATCGGGAGAAGAAGATAGAGTACAAGATTCGGAGAGGG
GACGAAACAGGCTTGGGGGGAAATATTCGAAGAAAGCGAGGTTAGTCGGGAACTTCCGTA
CCGAGAGAGGAGATGGGATGAGCCTCGATCAATCTATCTACTCCTGCGCACCCTACCCCA
GACGTAGACAGAGATGGAAGCCTTCGAAGTTCGAAGTGGCGCAGCTGAGGACAGCCCTGA
TCTTGGCCGCGCTGGGATTCCGCTGGATTCGGAACGGGTGAGCCGGGCGGCGCGGCGAAA
GGGAGGCTATTTGGGGCCAAGCACAAAATGGAAGGGATAAGGGCATCTTCAATGGTTGTA
AGATAGTTGTTGGTAATTTTGACACATAGAATTTTTGATGATGTGTCATTGCAATAAATG
AGGAAAGAGAACAAGGTTGTATGTAAATTAACCA