Map Locations of contig_2547084 (8182 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_2547084

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_36630 3 3498 bp AK252415.1 Available Available None





CDS Structure of MLOC_36630






Contig Sequence (8182 bp)

>contig_2547084 8182 assembly3_WGSMorex_rbca.fasta
ACCGCATCTTGGTCGTTACATGCCCGTGGCCGTTCAACCCTCGTTTGTGCCACCCCCCCA
AGCGGCATGGCAGCATCGTCGTCCACCGCGGCTTTTTTGTAGCCCCCGCCGGGCAGGCAT
GCGCGCCCAGTGCCGCCGATGTCGGCGCTGCAGAGGAGGCCCGCATCGACCCGAAAAGGC
AAGATCTCGAGTGTGAAGCACAAGAAGGCGGCTGCAAGAGCAACCTCGCAAACGCCTCCT
CCGGTTGTCAAGCTTGCGTGATAAGATATATATCATGATGCAATCAAATGAGGTGTTGGT
GATCAAGATATTGGAGGCGAAGAAGGAGTTGCCCGAGAAGAAAGCGCGAGAGAAGCAAGA
AAAGTGGCTCTTATTCAAGGAGGAGGGGTTGCGCAAGGCCGCCACTGAGGAGATGAAAGC
CCTTACCGAGGAGAACAAGGCTTTGGCCAAGCTTCTTGCGGAGGAGAATAAGATCATGAC
AATGGACCGCAATGAAATGGACGACATCATCAAAGAATGGCATGATATGACAAGAAGAAA
AATCTTGAAGACAAGGATGATGGCTGCAAGGTGTGATGGCTTCGGTGCCGGTGGTGGAAT
GAGTGGCGGTGGTGAAGAGTGATGATATTGACGATGATGGTCATGAAGATGGTGAAGATG
GTGGTTACTTTTGCATGACGTCTTTTAGCGTCTTGATTAAAAACTATGGTTTAATTTGTA
CGTAAACTATGTTTGATTGTTCAAATTTGATGCAAATCAGCGGAATTGATGTCAAATTAA
AAGTTTGAATTTTTACAAAATATTCTATGAATATTTTTATTTTATAGTTCTGTGATGCGA
GTTCTGTTCTGCCGCGGCCCTCATCAGCCCGTAAAAAGTGATTTTTGCAAACTATAAACG
CGCGATACAGGTCCGTGATATATTGGATCTGCTAGAGTTGCTCTAAGCTTCTCGTTTGCC
GCATTGGCATTGCAGCGGTGTTGCCTGCTCGTCTGGTCGAGTCCGTCCGACCAACATGAA
TGTTGTGGAGTCATGTTTGCTCTCGAGCAACGTTGACGACATGAACCAATCTTTTATATA
GGACAGGAGTATCATAGGAGTACAATAGTATTTAGAAGTGAGATACATGTCTCAAATAAT
AATACAAAAATAGGAATATATAACATCTCAAATAGAAATAGGAAAAAAGATGTCACTTGG
TTCACGGTTTTTTTTCTTTTGCTACTCCAAACCAATCCGACAAGATAGAAACCCCTCAAT
TCTAAACTTAGGGGCGCCTATGAGGAAAATTCAATTTTTTTCATGAATACACGAAAGCTT
TATGTATCATTGTATTGATAGAAGAAAAAAGAGTTTGAAGCATCATAGACAACGCCCCAC
AAGCACGAACACGAAGGCTAGCGTGAATGGAGAGGCCAAGCACGCATACAACGAGGAGGG
GAATGCGCTAACCCCAAAATTAAAAAACTACGGTCTCTGGCGAGATTAGCCCAAGTCCAT
TGGCTCCAGCACTTTCGGGGAAATTCATGGAACCCCAAAACACTCACCAATGAGCTTTGA
ATTAATTCTTCGCGTGGTGTTTCACGATACGATTTGGACCGCAGATCAGCTTGAGCAGTT
GGCATCAGCTTGAGCAGTTGGCAAACGATCTGGACTGTAGATCAGCTTGAGCAATTGGCA
AACCTTGTCTTATATTTTAAAATGTCGCTACGCTGCTAGGCCTCAACATTCAAACGAGCC
ATTTTAAAATACTGACCGCAAGGTAAACGAAGAAAAGCTCAAGCCTCAATGGTCATGCAT
GGAATGAGGGAAATGTGCACGGCTTTAGAACTCGTATGCGCTCTGGCTTTGTAGATAGGT
TGTGAGTTACATACTGTTCTCAGCCACAAAACTTACATCAAAAGCTTAACCAAGGATTCT
GTTTGCTGAAACGAGAGCTCCTTCCGCTTGCTTCATTCCGCTTTCCTCCGAAACAAACCG
TCTTCTGGTGAGCAGTGACCAAGTAGAGTAGAAAGCAAACACTTGTAACGGCTAGCTTTT
TCGTAGGGAGACAGCAAAACACACAAATGTTCAGGGTTTACCCTCGACTCGTTACTCAGG
GCAATTCAAATGTCGAGGGTTAAACCCCCAACTCATCACGAGAATACGGATTTGCACCAA
GTCAATCAATATACACCGTGCATGTAACCTATAGAAAAAAGGAACAGTCTCCAGGCAAAT
ACAGAACACCTTGTATCTCAAATGGGGAGGCTCTAAGCAGCTATCGTAATGGCACAGAGG
TGGCTCATGAATCAAGCCGGTATGCAGTAGGAGGTGCTGAGGGTGGGAGGAAGCACGCAC
ACCAGGTGGGGACCTGCCGGGTTGCAGCTGATATTCGCATCGCCTACGTCGGGCAGGCCT
AGCTGTGGCGGGTGTACATACCCCGACACCAGCGGGACACACGTCACGGCGATCTCGATC
CTTGATCCTATGGGTAAAATGGATGCCTACTGTTATATTGGTGCACACAGTAATTCTGAA
TTGGTGCTAAATAAAGATGGATGGCAAGTGAAGTGAACCGCAGATGTGTCTAGATTCTAA
CCTTGTGTTTCTGAGAATGAAATGTGACCGCTTTTCCTCCCAGCAACCATCCAGTTCTGT
GGATTAGCGTCCACCTGATAAAGTATCTCATCCTGCCAAATTGAATTTGGATTAGTTATG
ATGAAAGTTTCCAGTGGCATCTGCATAAAGTGATGCCTACTGAGACGCAAGAAAGGAATG
TTCTGCAGACTTACATCGGACAGAGATGCCTCCTCCAGGTCCTTGAGCCTTTCAACCCGC
CATTTCATGTTGACTAATTGACCAACCCTCAGGCAATCGGTAGAAAACGGAAGGAATCCA
ACTGCCAGGCATGGATCCAGAACAGGGCGCTTCAGTTTGAGTGAAATCTTGAACAGAAGC
TCTTCAGAGTCATCAGGTTTAACAGGAACTGGAGAGTGTGCTCCGGTTGCTCGGTCACCG
GATATCCCGTATTTAATATTCAACATGCTGTCTGCCTGTTCCAACTCATCTAGGTCTGAA
AATGTGAAAGTTCAAATGGGTGATTCATGTTTAAGATTGGTAGCGCTTAGAAAATGGAGT
TTACGTTGTACATTTTAGATGGTCATTGTGGCAACCAATAATTCAACCTAAGAAAACTAT
AATTTTTGTGGTTAGCTTTGGCATAGTGAAGTACATGACTAGTAGTCGTACCAAGGAGTA
ACAGACGTGAGCAATCATCCATTGCAAGTCAGCTATGGTAAGTGAACTTCCTAGAGAAGA
AGTACCTTTTGTGCCACTTAAACGTATCACAAATAAGATTCCAGCTTTGGAAGAAGGAGC
AATAACCAGAGGGAACAAACTCGAAGTCGGACGTCCATCTCCCTTGCCTAGGTGCTCAAA
TCCAGCTTGTAGGTCCAATAATACATCCTTTACATGCAGAGTAGCCTTCACTTCAGAATG
CAATATTACCTGGACACAAAATAGAACATAAATTGGGATCCAATAATCCAAGAGAAATTA
GTACTAATAGATACATGCATTTGTTCAAATATGTTACTAGAGCTGCCAAAAATATACTTT
ATGTGCATTGTTGCTGACACCTAATACAAGATGAAGAGCATATTTTATGTGCCTTTTTTT
TTACAATGTATCATCTAACAATTGTGTAAACATTAAGACTGTACCTGCAGAAGTAGAGTT
CCATCATTGCACTTGTCAACAACACGTGTGCTCACATGGAATGGATTAGTGAAATGTACG
GCAATGGTCCTGGAAAGCAATCACAATGGTATTTCTTTACTTGGCATATCTAAATAATGA
AGTGAGAGCACAAATACTTGAGGTATACCTTTCAAATATTTGATTATGGAAAGCTCCAAA
TTCAAGCTTGAGAGCAATCATTCTCATCCCATCTACTATGCTATGTTTCTGAGGGGATGC
TGAACAAATAAAGACACGATAAAAATGTCAACTGACTGGATGAAACACACTACTATACCT
GATGTTATCTATTTCATACGAACCTGGGGATGTTCCCTTTGCAATTGTATCGTCGATAGC
ACGAACAGGGAACCAAACAAGAGTTGTCACGTCACTAGCCCAATCTGGCAGTTCTATCTT
CCCATTTCCGATAGGAACCTTCTCAACCCTTCCAGTATCAGTGGACCTTGATAATGCTTT
GGAAGCATCAAGATTACCAGAATGATCCCCATCGCTTCTGTAGCTTTCTATCTCAATCAT
CTGCGACTCCTCGATTTTTAGTTCAGCACCGGCATCTATATGCAGTATGCCACCTTTCAA
AGAATAGTCTATAGGCTTGACAATCAACCCGATCCACTGGAGTTCATTCATAAGCAATGC
AGAGGATACAGCAGGAGTAATATCAACCAAAGCCCTCGGTTTTCTCACCTAGAGTGAATG
CAAACACAAAAAGTGAGACAGGCCCGATTGAAAGCACACACCCTAAGTATAAGAAAGGTT
TACCATGTTATATTTAAGTGTGCCTATTTATAATTTTGAAAATAATGCTAGCTGACTTAT
GGTTAGTTGACATGATTCACCAGGACCGATTTGTCATAATACTCCAGCTAATTTTAATGC
ATTACCTTCAAAACAGGTCTTGTGGGCTTCTCAAAGCTCATGAATTCATCAGTGTCCACT
GGACTATCTTGAGAAAATCCATGTGATCTGAATGACAGCTTGCCAATCTGTCCAGTGAGA
GCGCCCAACACATAGGAACCTGGCTTTTGAGGAGGAATGTCAAAGGTGATAATATTTCTA
CCTGGTACAAGAACACGTGCATCCGTACTCCTTATTGCCTGCATGACATGGCATCATTCA
TCGATTAGGTGACTGCAAATAATACATGTGCAGACTTCTGAAAGTTGTCCTACATGTACG
AACTTCTGAAAGTTGTCCTACAATGATGAAACTGGATTTGGATTGGGAACATACTATTGT
ATCAGACTAAACAAGAAGTCTAGATCCCACAAGTAAAAAAGGAAAGTAATTGATAGTAAC
AGCTAATTAACTATACCTTAAGACCTTCATCTGCACTAGAGAAAGCTGACAATCTTAAAC
TGAGAGACTCAAGTGTCATGTCATCTGGGAAGCCACTCCAAACTGCTACAGATAGTGTAC
CGGGATCACCATCACATAATTCTAGCAGCGGAGCAGGATTTCCGGCGAATGTAATTAGTG
ATGAAACATCAAGGGGTACAGGATGGCTCATTTCACTGTGAGCAAGCCGAACAACCTCTG
ACTGGAAAGCTTGCCGCTCTTTAGATGAAAACAAGCTACTCTCAATAGAAAGTAACTTCA
CACAGGAAGCCAGATAACCAGCTTCGTCATTAAGAATCTTCTGGCATTCTGCAAGATCAG
GAAGAACATCTGCCAACAGCTCTTCCCAGCCTTCTGCAGAATAGAGAGCACACACTTTTT
CATAGGATTTTGCAGCCAAATCATAATTCCCATGCTTAAAATATATAGCTGCAATCTCTC
CATCAAGCACAACTCCATGTCTTTTCCACCAAGAGCGGTGATAATTGTCAGCTGCGCCTT
TAGTAAGCTCCATATATCTATTCTGTTAACACAGAAACAAACACTCTTTGCAGTTTATTT
TTTTAATCTATTGCTTGGGAAAATCTATTTAAATAACATGGTATTCAAGTAGTGTCTCCA
AAATTACTTACTTCAACAAACTAATTTTAAAATAGATTAGGGAGGAGGGGGGGGGGAATG
AGCAGAATGGGAAAGTATAATTAAGGTGTTCCAAAAATATATATAACAGGATAGTAAGAA
AAGAATCTATAATGACGAGCTGTGGCTGAATAAATATAGCACCTCAAATTCTTCTGGTGA
TGAAAGTGACGTCATAAAGTCAGGATCAGATATCGTCTGTTTCAATGCATGCTCAGCAGC
AACATGAATTTCTGACAATCTCATGGGCCGATCAACTGGTAGAGAAGTCTCAGAGGTTGC
TGGCCCAGACATAGTTCTTGTCATCAAGTTAGAAGACGATTTGTTGGGAGAAACTTTTGA
ATGTGGACCAAAACCTGAACTGTCCAGACAAAAATATACACATACATAAATAAGACAACC
CATAGTTTATGCTGAAATTCCCACTCCAGATATAAATGCATCATAAATGGGAGAAATGGC
TGCCCTTACCCATCAACTGAATCATATAATTCAGCCAAATTTCCAACTGAAAGAAAAGCT
CTACGCCTATTAGCCTCACGTAGAAGAGAGGAAGGTTCCAGTGGCAGGGGTTTCCTCTGA
ATGTCAAAGAGCTTTTCTCTTGCTTTTGCTTGAAGAATTGTCTGCATAGAGAGAATATTT
CACAACTTTAAGCCACAGTTTGAATTACATATGCAATTAGCAGCTAAACAGTAAAGCATT
TTCTTTTGTCCAAGATCGAGGGAGAGCCGTAAAAGAATTCCCATTTTCCAACTCCAACAT
TTGGCATCTCCGGTTTCTTTTTTATTATTCTACACCCAAATGCATAATTATACTAGTGAT
GAAACTGAGTGTTTCCGTGTATGAAAAATTGCATGTTCACAGGAACAAAAAACTGAAAAT
GATATTGATCCCTAACATGGATGCAAGGAGTAACATTTTCCATTTCCATATGCCATGCTT
TATTTCATGCCATTTCGTACAGAAAGATTTGCCTTTTGAGCATACAATATTAGAGTAAGG
GCGACAACATTTAGTGACTGATTTCTAACATGTTGATGTTGTCACTTCGCATGGTTATGG
CCCAATTAGACCACATAAGAGTGAAATAGACTTTTGATGCAGATGAAACATAATAAGAAG
GCATGATATAAAGCTGAAAAATGCTTGCCTTCTCCTTTGCCATTACTTCCGACGACGAAT
CAGGTGGAATCGAAGGCCAAGTAGCTGGCTTTGGCCAAGATAGCATGCTTAATGATGCAC
TACAGGTACATTAAACATGTCAGCTTGAACGCAAAACTGGATGGAAAGGTGAATTCAGAA
TATATAATAGTGACATTGATCTTATACCTGTTGACTGGACTCTTTTCTATTTCAACCCCA
TAACCAATCAAATAAGCAAGCCTCATAAACTGCCATATTCATCAAAAGTAATATGTAAGC
AAAGAGTTTTGCATGTTTTCAGCGAATTAGGCAAATATAGTCCAAAAGATAAGCAAAAAG
GAGTGGATGGAACATTTAATCTGATTGCAGCAAGAAGCTAATAAACCAACAAAACACAAA
ACAAGAACTGCATTCTCTAGTGTCCATTTGAACTTCAAATCATTATAAACTGCAGACAGA
TGATTATTCGAACTTGCCTTAGCACGACAGAGAGAATAAAGGTCACCCTGAAGACGATAG
AACTCCTTTTCTGAATCAATAGCAACAACTCCACCATCATACTGTGTACTTGTAGATTTA
ATTAAACCCAAACAAGCAGTTATCACCCATACTTCGCGGAAACAAAAGGGTAGTGCATTC
TGAAGGGAGAAGGGAAAACACATTCAGGATTAATAAACAAGTAGTATTTCGCAAAGGGTG
ATAGTCTTCCTAGAACATATTTAATTCTTGGCGAGAAAAATAGTGAAACCAAAGTTACAT
ACTTCATGCAAGGCTAGCGTCTTGGAAAAGCTGACAACAAAAGCATATCCTCTTGCAGCA
ACCTCAACTGGCCGAGAAAGTTTAAATAATAACTGAAAAGGTGAAATGAAATAAATGATA
AATAAAATATTTAATTGTCAGTTGCCATAGAACTATTAATAATGAATTGTATAAAAAAAT
AGCATAAATTAAAACGACACAGGTTGTAGTTCTATATGACAAGATCCATTTGAGCACAAT
AAGAGCATGTCCCTCTCCTAATTAATTAAATAAGTGTCAGTCCTTTAATGCTTGTGCAAA
ATTACAAGTAATTATTGTTGTTTCATGCTCCTCTCCTAATCATAAACATTGCGTAACTCT
AAGTTGCTACAAAATAAAGCAATAAATCGAGGTGGTTTCATACTTACATAAAATACTAAG
CAGTTGTACAATATTGCACAAACTATTTCAACAAGGGACAGATTTAGGGAATGGCTGGCC
ATACTCTTATCTTCGGCCAGCACCCGTGTCTTGCTCAATGGAGTGCCCGGACCCCCGATA
TGGCACCGTCGCGGGCTGCGCC